Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_018269.1
Length=31766
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 96.9 7e-16
>seq129631
Length=630463
Score = 96.9 bits (106), Expect = 7e-16
Identities = 182/265 (69%), Gaps = 2/265 (1%)
Strand=Plus/Minus
Query 25022 CCGAGCTAATGAAGTATCAGAAATTTCGAAATCACTTAAATCCA-TGGCGAAAGAATTTA 25080
|||| || |||| | | |||||||| | | | |||||| || |||| || |||||
Sbjct 138576 CCGAACTCTTGAAATTGCTGAAATTTCTAGAAC-CTTAAAAGCACTGGCAAAGGAATTAC 138518
Query 25081 ATTGTCCAATGATCGCGTTATCACAGCTTAACCGAGGTCTTGAAAACAGACAGGATAAGC 25140
| ||| | || || |||||||| | ||||| ||| ||| | ||| |||||
Sbjct 138517 AAGTACCAGTTATAGCATTATCACAATTAAACCGTTCTCTAGAACAAAGATCAGATAAAA 138458
Query 25141 GCCCAATTAACTCAGACTTGCGCGAGTCTGGCGCGATAGAACAGGATGCTGATCTAATCG 25200
| ||| | || ||||| || ||||||||||| | ||||||| || || ||| ||||
Sbjct 138457 GACCAGTAAATTCAGATTTACGCGAGTCTGGTTCTTTAGAACAAGACGCAGATTTAATAA 138398
Query 25201 CATTGATATACCGAGACGAAGTGTATAACCCCGACAGCTCTGACAAAGGCATTGCCGAGA 25260
|| ||||| || |||||| | ||| || | || | ||||| ||||| || |
Sbjct 138397 TGTTTATATATCGTGACGAAATATATCACGAAAATAGTGATTTTAAAGGTATTGCTGAAA 138338
Query 25261 TTATCATTGGCAAACACAGGAATGG 25285
|||| || || ||||| || |||||
Sbjct 138337 TTATAATAGGAAAACAAAGAAATGG 138313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 101349794505024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |