Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_018269.1 Length=31766 Score E Sequences producing significant alignments: (Bits) Value seq129631 96.9 7e-16 >seq129631 Length=630463 Score = 96.9 bits (106), Expect = 7e-16 Identities = 182/265 (69%), Gaps = 2/265 (1%) Strand=Plus/Minus Query 25022 CCGAGCTAATGAAGTATCAGAAATTTCGAAATCACTTAAATCCA-TGGCGAAAGAATTTA 25080 |||| || |||| | | |||||||| | | | |||||| || |||| || ||||| Sbjct 138576 CCGAACTCTTGAAATTGCTGAAATTTCTAGAAC-CTTAAAAGCACTGGCAAAGGAATTAC 138518 Query 25081 ATTGTCCAATGATCGCGTTATCACAGCTTAACCGAGGTCTTGAAAACAGACAGGATAAGC 25140 | ||| | || || |||||||| | ||||| ||| ||| | ||| ||||| Sbjct 138517 AAGTACCAGTTATAGCATTATCACAATTAAACCGTTCTCTAGAACAAAGATCAGATAAAA 138458 Query 25141 GCCCAATTAACTCAGACTTGCGCGAGTCTGGCGCGATAGAACAGGATGCTGATCTAATCG 25200 | ||| | || ||||| || ||||||||||| | ||||||| || || ||| |||| Sbjct 138457 GACCAGTAAATTCAGATTTACGCGAGTCTGGTTCTTTAGAACAAGACGCAGATTTAATAA 138398 Query 25201 CATTGATATACCGAGACGAAGTGTATAACCCCGACAGCTCTGACAAAGGCATTGCCGAGA 25260 || ||||| || |||||| | ||| || | || | ||||| ||||| || | Sbjct 138397 TGTTTATATATCGTGACGAAATATATCACGAAAATAGTGATTTTAAAGGTATTGCTGAAA 138338 Query 25261 TTATCATTGGCAAACACAGGAATGG 25285 |||| || || ||||| || ||||| Sbjct 138337 TTATAATAGGAAAACAAAGAAATGG 138313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101349794505024