Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_019500.1 Length=168066 Score E Sequences producing significant alignments: (Bits) Value seq129631 156 5e-33 >seq129631 Length=630463 Score = 156 bits (172), Expect = 5e-33 Identities = 248/353 (70%), Gaps = 2/353 (1%) Strand=Plus/Plus Query 94853 TACCAACTCCTATTATGGCTGGAGCACGTACACCAACCCGTCAATTTAGTTCTTGTGTGG 94912 |||| || || |||||| | |||| | | |||||||| ||||||||||||||||||||| Sbjct 522216 TACCCACACCGATTATGTCAGGAGTAAGAACACCAACTCGTCAATTTAGTTCTTGTGTGT 522275 Query 94913 TTATTGAAGCAGGCGACTCACTGAAA-TCTATTAACAAAACTGCTAACTCAATAATTGAA 94971 | |||||| | || | | | ||| |||||||| || ||| |||| | || Sbjct 522276 TAATTGAATGTGCAGA-TAATTTAAACTCTATTAATGCTACAACTAGTGCAATTGTAAAA 522334 Query 94972 TACATTTCTAAACGTGCCGGTATTGGTATCAACGTTGGTATGATTCGTGCTGAAGGTTCT 95031 || ||||| |||| || || || || || |||| |||| ||||| ||| ||| | Sbjct 522335 TATGTTTCTCAACGAGCAGGAATAGGCATTAACGCTGGTCAAATTCGAGCTTTAGGAAGT 522394 Query 95032 CGTATTGGCATGGGCGAAGTCAAGCATACCGGTGTTATTCCATTCTGGAAACATTTCCAG 95091 | ||| | | || |||| |||||||| |||||| || | ||||| ||||| Sbjct 522395 CCTATCAGAAATGGAGAAGCATTTCATACCGGATGTATTCCTTTTTATAAACACTTCCAA 522454 Query 95092 ACTGCTGTTAAATCATGTTCACAAGGTGGAATCCGTGGCGGCGCTGCTACTGCTTATTAT 95151 | || || ||||| ||||| ||||||||| | | || || || || |||| || ||| Sbjct 522455 AGCGCAGTAAAATCTTGTTCTCAAGGTGGAGTTAGAGGAGGGGCCGCAACTGTTTTTTAC 522514 Query 95152 CCTATTTGGCATTTGGAAGTTGAAAATCTGCTCGTTCTGAAAAACAACAAAGG 95204 || || |||||| | ||| |||||||| | | ||| | ||||| || | ||| Sbjct 522515 CCAATATGGCATCTAGAAATTGAAAATTTATTAGTTTTAAAAAATAATAGAGG 522567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536680864420640