Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_019500.1
Length=168066
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 156 5e-33
>seq129631
Length=630463
Score = 156 bits (172), Expect = 5e-33
Identities = 248/353 (70%), Gaps = 2/353 (1%)
Strand=Plus/Plus
Query 94853 TACCAACTCCTATTATGGCTGGAGCACGTACACCAACCCGTCAATTTAGTTCTTGTGTGG 94912
|||| || || |||||| | |||| | | |||||||| |||||||||||||||||||||
Sbjct 522216 TACCCACACCGATTATGTCAGGAGTAAGAACACCAACTCGTCAATTTAGTTCTTGTGTGT 522275
Query 94913 TTATTGAAGCAGGCGACTCACTGAAA-TCTATTAACAAAACTGCTAACTCAATAATTGAA 94971
| |||||| | || | | | ||| |||||||| || ||| |||| | ||
Sbjct 522276 TAATTGAATGTGCAGA-TAATTTAAACTCTATTAATGCTACAACTAGTGCAATTGTAAAA 522334
Query 94972 TACATTTCTAAACGTGCCGGTATTGGTATCAACGTTGGTATGATTCGTGCTGAAGGTTCT 95031
|| ||||| |||| || || || || || |||| |||| ||||| ||| ||| |
Sbjct 522335 TATGTTTCTCAACGAGCAGGAATAGGCATTAACGCTGGTCAAATTCGAGCTTTAGGAAGT 522394
Query 95032 CGTATTGGCATGGGCGAAGTCAAGCATACCGGTGTTATTCCATTCTGGAAACATTTCCAG 95091
| ||| | | || |||| |||||||| |||||| || | ||||| |||||
Sbjct 522395 CCTATCAGAAATGGAGAAGCATTTCATACCGGATGTATTCCTTTTTATAAACACTTCCAA 522454
Query 95092 ACTGCTGTTAAATCATGTTCACAAGGTGGAATCCGTGGCGGCGCTGCTACTGCTTATTAT 95151
| || || ||||| ||||| ||||||||| | | || || || || |||| || |||
Sbjct 522455 AGCGCAGTAAAATCTTGTTCTCAAGGTGGAGTTAGAGGAGGGGCCGCAACTGTTTTTTAC 522514
Query 95152 CCTATTTGGCATTTGGAAGTTGAAAATCTGCTCGTTCTGAAAAACAACAAAGG 95204
|| || |||||| | ||| |||||||| | | ||| | ||||| || | |||
Sbjct 522515 CCAATATGGCATCTAGAAATTGAAAATTTATTAGTTTTAAAAAATAATAGAGG 522567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 536680864420640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |