Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_019501.1
Length=39646
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 123 6e-24
>seq129631
Length=630463
Score = 123 bits (136), Expect = 6e-24
Identities = 229/336 (68%), Gaps = 0/336 (0%)
Strand=Plus/Minus
Query 4182 CATTTGCATGGTTCCACCAACGCCCACGATGACTTCGGTAGTGAACCTATCCTGTCCGCT 4241
||||||||| || || |||| | || || | ||| || || | | || | || |
Sbjct 140987 CATTTGCATCGTACCGCCAATGTTAACTATAATTTCTGTTGTATAACGTTCAAGACCATT 140928
Query 4242 TTGATCCTGCCATTTTCTTGTCCGCAATTTTCCTTCAAGATAAACCTCAGAGCCTTTTCG 4301
||| || ||||||||||| || | | |||||||| ||| || | ||| |||||||
Sbjct 140927 TTGGTCTTGCCATTTTCTAGTTTGAAGGGATCCTTCAATATATACTTGAGAACCTTTTCT 140868
Query 4302 CAGATATTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACGCGGTGCCACTCCGT 4361
|| |||||| | |||||||| |||| ||| || | ||| | | ||||| || ||
Sbjct 140867 CAAATATTCTCCAGCAATTTCAGCCAATTTTCCAAATAATACTATTCTATGCCATTCTGT 140808
Query 4362 CTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGCAACTGTAAG 4421
| ||| || | || ||||| | ||||| ||| | ||||| || |||| ||| |
Sbjct 140807 TTTCTCTTTATTTTCACCAGTATTTTTATCTTTCCAGTTCTCTGAAGTTGCAAGTGTCAT 140748
Query 4422 GTTTGCAAATGCCGTTCCTGATGGTGAATATCTGATTTCTGGATCATGCCCAAGGCGACC 4481
||| | | ||| | || ||| ||| | | ||| ||||| || || | | ||||
Sbjct 140747 ATTTACTACTGCATTACCATTTGGCATATAACGAACTTCAGGATCTTGGCCTAAGTGACC 140688
Query 4482 AATAATGATCACCTTATTTACGCCTCTGCTTGCCAT 4517
||| | ||| || |||||||| ||||| ||||||||
Sbjct 140687 AATTAAGATTACTTTATTTACACCTCTACTTGCCAT 140652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126521137820064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |