Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq129631 95.1 2e-14 >seq129631 Length=630463 Score = 95.1 bits (104), Expect = 2e-14 Identities = 282/435 (65%), Gaps = 0/435 (0%) Strand=Plus/Minus Query 119883 TTATTGATATGCACACTGTAATCAAGACCCCGGATCCGGGTTTCATCAGTACCCTTGTTA 119942 ||||| || || ||| ||||||||| || | | |||| ||| | || | ||| Sbjct 522618 TTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTA 522559 Query 119943 TTCTTCAATACAAGCAGTTTCTCAACCTCCAAATGCCACATAGGGTAATTCAGAGTAGCA 120002 || || || || | | || |||| || | |||||| || |||||| | ||| || Sbjct 522558 TTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCG 522499 Query 120003 GAGCCGCCACGTAGAGCACCTTGCGAACAGCTCTTAACCGCAGTATGGAAGTGCTTGTAG 120062 | || || | | ||||||| ||||| || || || | |||||||| || || Sbjct 522498 GCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAA 522439 Query 120063 AATGGGATTACGCCGGTATGGGTTGCTTCGCCGTTGCGAATTGGTGAACCCTCCGCACGA 120122 || || || |||||||| |||||| || || | || || || || ||| Sbjct 522438 AAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGA 522379 Query 120123 ATAGCACCAGCATTAATACCAATACCAGCACGTTGACTGATATAACTAATAATAGATGCA 120182 || |||||| ||||| || || || || |||||| | ||| | | ||| | | Sbjct 522378 ATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTA 522319 Query 120183 GACGTATCGTTAATAGATTTCAGAGAATCGCCGGATTCAATTTTCACACACGAACTAAAT 120242 | ||| | |||||||| || | | ||| | |||||||| |||||| ||||||||| Sbjct 522318 GTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTAAAT 522259 Query 120243 TGGCGCGTTGGGGTGCGGGCACCACCCAAAATAGGGGTTGGGATTGAAATCTTAAATAGA 120302 || || ||||| || | | || || ||| || || || | || || ||||| Sbjct 522258 TGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAAGTG 522199 Query 120303 GAAGCCGCATTATAA 120317 ||| ||||||||| Sbjct 522198 GAAATTGCATTATAA 522184 Score = 87.8 bits (96), Expect = 3e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 198931 ATTTGGCCCCTTAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTT 198990 || |||||| |||||||||| ||| ||||||| ||||||||||||| |||||| |||||| Sbjct 130152 ATATGGCCCTTTAGCTCAGT-GGTCAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTT 130094 Query 198991 CGAGTCCAGTAGGGGCCA 199008 | | ||||| | |||||| Sbjct 130093 CAAATCCAGCAAGGGCCA 130076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740067408191920