Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq129631 80.6 8e-11 >seq129631 Length=630463 Score = 80.6 bits (88), Expect = 8e-11 Identities = 103/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 45946 ATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCTGTTGACACATATGGTTGCCCA 46005 |||||| || || || ||||| || ||||||||||| | | | ||||||| | || || Sbjct 240388 ATTTCTTGGTTTACCCTTTAATATAGCTAGCTATGCAATACTTATACATATGATAGCTCA 240329 Query 46006 ACAATGCGACCTCGATGTCGGCGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAA 46065 ||||||| | ||| | || || ||| | | | || || || || || ||||| || || Sbjct 240328 ACAATGCAAACTCCAAGTTGGAGAATTTTTATGGACAGGGGGAGATGTTCATTTATATAA 240269 Query 46066 AAATCATCTGGAACAAGCGAAA 46087 ||||||| | ||| ||| ||| Sbjct 240268 AAATCATATTGAATTAGCAAAA 240247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157471029365676