Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq129631 132 3e-25 seq9 111 1e-18 seq3 111 1e-18 seq10 107 1e-17 seq2 102 5e-16 seq4 100 2e-15 seq7 95.1 8e-14 seq12 93.3 3e-13 seq1 93.3 3e-13 seq14 91.5 1e-12 seq13 91.5 1e-12 seq11 91.5 1e-12 seq8 89.7 3e-12 >seq129631 Length=630463 Score = 132 bits (146), Expect = 3e-25 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 474665 CAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTT-GGACA 474723 ||||||||| || || ||| ||||||||| |||| || || | ||| ||| | Sbjct 551420 CAAATTTCTGCAGAAGTGTTAAAAAAAATGAAAAAAACTGC-AGAAGACTACTTAGGAGA 551478 Query 474724 AGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGC 474783 | ||| | || ||||| ||||| ||||| || |||||||||||| |||| | ||||| Sbjct 551479 ATCAGTGAAAGAAGCAGTTATTACAGTTCCTGCCTATTTTAATGATGCTCAGAGACAAGC 551538 Query 474784 AACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAAC 474843 |||||| ||||| || ||||||||||| | | || | | |||||||| ||||| || Sbjct 551539 AACTAAGGATGCTGGTAGAATTGCAGGATTAGAAGTCAAAAGAATTATTAACGAACCTAC 551598 Query 474844 AGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 ||| || || |||||||||||| | ||||| Sbjct 551599 AGCTGCAGCGCTTGCTTATGGTTTAGATAA 551628 Score = 120 bits (132), Expect = 2e-21 Identities = 256/377 (68%), Gaps = 19/377 (5%) Strand=Plus/Plus Query 475785 AAAG-TGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTA 475843 |||| ||| ||||| |||||||| |||||| ||| ||||| || |||| || | | | Sbjct 552167 AAAGATGTTAATCCAGATGAAGCGGTTGCAGTTGGTGCTGCAGTTCAAGGAGGTGTACTT 552226 Query 475844 TCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCA 475903 ||||| || |||| | | || || | |||| ||||||||| | ||| Sbjct 552227 TCAGGC-----------GATGTTAAAGA-TGTTTTATTGCTTGATGTAACTCCATTGTCA 552274 Query 475904 TTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATC 475963 ||||| |||| || | || || || |||||| || || | | ||| || |||| Sbjct 552275 TTAGGAATTGAGACTATGGGGGGTATAATGACTTCACTGATAAATAAAAACACAACTATT 552334 Query 475964 CCATGCAAAAAATCAA-AAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCAT 476022 || | | ||| || |||| ||||| || ||||||||| | ||||||| || Sbjct 552335 CC-TACTAAACATAGTCAAGTTTTTTCAACAGCAGAAGATAATCAATCCGCTGTAACAAT 552393 Query 476023 CCAAATCTTTGAAGGTGAAAGAAAATT--CACTAAAGATAATAACAAACTTGGAACTTTT 476080 || || || |||||||||||||| ||||| ||||| || || || ||| Sbjct 552394 ACATATTCTTCAAGGTGAAAGAAAAAGAGCACTA--GATAACAAATCTCTAGGTCAATTT 552451 Query 476081 AATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGAT 476140 ||||| || || ||| || || || |||||| | |||||||||||||| |||||| Sbjct 552452 AATCTAGACGGAATTGAGCCAGCACCAAGAGGAACAGCACAAATTGAAGTTACATTTGAT 552511 Query 476141 ATTGATGCAAATGGTAT 476157 |||||| | ||||||| Sbjct 552512 ATTGATTCCGATGGTAT 552528 Score = 100 bits (110), Expect = 2e-15 Identities = 135/186 (73%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 290843 GCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAATCT 290902 || ||||| ||||| || ||||||||| || || | ||||||||| | | | ||| Sbjct 551604 GCAGCTGTAGGTTCGTTAATAATTCTTTTGACTTCTAATCCTGCAATTCTACCAGCATCC 551545 Query 290903 AAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCtttttcc 290962 |||||| || | || |||||||||||||| ||||| ||||||||||| |||| || | Sbjct 551544 TTAGTTGCTTGTCTCTGAGCATCATTAAAATAGGCAGGAACTGTAATAACTGCTTCTTTC 551485 Query 290963 act--ttctttttcaaataattttctgccatttgttttatttcTATAAGTATTTGTGCGC 291020 ||| |||| | || || | |||||| ||| ||| |||| | | | | || ||| Sbjct 551484 ACTGATTCTCCT--AAGTAGTCTTCTGCAGTTTTTTTCATTTTTTTTAACACTTCTGCAG 551427 Query 291021 AAATTT 291026 |||||| Sbjct 551426 AAATTT 551421 >seq9 Length=700855599 Score = 111 bits (122), Expect = 1e-18 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 474647 AAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC- 474705 || || |||||| | ||| |||||||||| ||||| | ||| ||| | | ||| Sbjct 644717878 AAGCAGTTTTCAGCTGAAGAAATTTCTTCCATGGTCCTCATCAAGATGCGTGAGATCGCT 644717937 Query 474706 GAGCTCATATCTTGGAC-AAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTA 474764 ||| | || || ||| || | ||| |||| || | ||||| || || || || | Sbjct 644717938 GAGG-CTTACCTAGGAGTAACTATTAAGA-ATGCTGTTGTCACTGTGCCTGCTTACTTCA 644717995 Query 474765 ATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTAC 474824 ||||||| || | || ||||| || ||||| || ||||| ||||||||||| | | Sbjct 644717996 ATGATTCCCAGAGGCAGGCAACCAAGGATGCTGGTGTTATTGCTGGTCTTAATGTGATGC 644718055 Query 474825 GTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 |||| || || || ||||||||||| ||| |||| ||||||||||| ||||| Sbjct 644718056 GTATCATCAACGAGCCAACAGCAGCTGCAATTGCCTATGGTCTTGACAAGAA 644718107 Score = 91.5 bits (100), Expect = 1e-12 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 |||| |||||||| || || ||||| || || | |||||| || ||||| || | | Sbjct 172664382 TTACCGTTCCAGCGTACTTCAATGACTCGCAGAGAACAGCAACAAAGGATGCTGGCCGTA 172664441 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 ||||||| || | ||| | || ||||| ||||| ||||| || || | |||||||||| Sbjct 172664442 TTGCAGGGCTGGAAGTTCTGCGCATTATAAATGAGCCAACTGCTGCATCTCTTGCTTATG 172664501 Query 474864 GTCTTGATAAGAA 474876 || |||| ||||| Sbjct 172664502 GTTTTGAGAAGAA 172664514 Score = 87.8 bits (96), Expect = 1e-11 Identities = 135/193 (70%), Gaps = 10/193 (5%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | ||||| || ||||| || ||||| || || | || || || || |||| Sbjct 103793563 ATGCTGTTGTCACTGTACCTGCATACTTCAATGACTCGCAGAGGCAGGCTACCAAGGATG 103793504 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || ||||| || | ||||| | ||||| || || || |||||||| || || Sbjct 103793503 CTGGTGTCATTGCTGGCATCAATGTCCTTCGTATCATCAACGAGCCAACAGCTGCTGCCA 103793444 Query 474855 TTGCTTATGGTCTTGATAAGAATTCTGACA--------AAGAAGTAAATGTTTTAATCTT 474906 |||||||||||||||| ||||| || || ||||| ||||| | ||||| Sbjct 103793443 TTGCTTATGGTCTTGACAAGAAGGCTTCCAGTGTTGGTGAGAAG--AATGTCCTCATCTT 103793386 Query 474907 TGATTGTGGAGGT 474919 |||| ||||||| Sbjct 103793385 TGATCTTGGAGGT 103793373 >seq3 Length=775183943 Score = 111 bits (122), Expect = 1e-18 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || ||||| ||||| || || || | || || ||||| || || Sbjct 659680156 ACGAAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGT 659680215 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || || ||||| |||||||| || ||||||||||| || |||||||| || Sbjct 659680216 GCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGTTGTTGGTCTGGAGGAATGCC 659680275 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||| || |||| |||||| | || || || || | | | | || |||| Sbjct 659680276 CTCCTTGTCCTGGCTCTTGGCCTTGACATCGTCGATGGTGTCGGAGCTCTCAA-CCTCAA 659680334 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || || || || ||||| ||||| ||||| || || Sbjct 659680335 GGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTG 659680374 >seq10 Length=712180895 Score = 107 bits (118), Expect = 1e-17 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | || || || || || || |||||||| || | || ||||| || |||| Sbjct 660585769 ATGCTGTTGTCACCGTGCCTGCTTACTTCAATGATTCCCAGAGGCAGGCAACCAAGGATG 660585828 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || ||||| ||||||||||| | ||||| || || || ||||||||||| ||| Sbjct 660585829 CCGGTGTTATTGCTGGTCTTAATGTGATGCGTATCATCAACGAGCCAACAGCAGCTGCAA 660585888 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 |||||||||||||||| ||||| Sbjct 660585889 TTGCTTATGGTCTTGACAAGAA 660585910 Score = 91.5 bits (100), Expect = 1e-12 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 |||| |||||||| || || ||||| || || | |||||| || ||||| || | | Sbjct 192542786 TTACCGTTCCAGCGTACTTCAATGACTCGCAGAGAACAGCAACAAAGGATGCTGGCCGTA 192542845 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 ||||||| || | ||| | || ||||| ||||| ||||| || || | |||||||||| Sbjct 192542846 TTGCAGGGCTGGAAGTTCTCCGCATTATAAATGAGCCAACTGCTGCATCTCTTGCTTATG 192542905 Query 474864 GTCTTGATAAGAA 474876 || |||| ||||| Sbjct 192542906 GTTTTGAGAAGAA 192542918 Score = 87.8 bits (96), Expect = 1e-11 Identities = 135/193 (70%), Gaps = 10/193 (5%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | ||||| || ||||| || ||||| || || | || || || || |||| Sbjct 116645077 ATGCTGTTGTCACTGTACCTGCATACTTCAATGACTCGCAGAGGCAGGCTACCAAGGATG 116645018 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || ||||| || | ||||| | ||||| || || || |||||||| || || Sbjct 116645017 CTGGTGTCATTGCTGGCATCAATGTCCTTCGTATCATCAACGAGCCAACAGCTGCTGCCA 116644958 Query 474855 TTGCTTATGGTCTTGATAAGAATTCTGACA--------AAGAAGTAAATGTTTTAATCTT 474906 |||||||||||||||| ||||| || || ||||| ||||| | ||||| Sbjct 116644957 TTGCTTATGGTCTTGACAAGAAGGCTTCCAGTGTTGGTGAGAAG--AATGTCCTCATCTT 116644900 Query 474907 TGATTGTGGAGGT 474919 |||| ||||||| Sbjct 116644899 TGATCTTGGAGGT 116644887 >seq2 Length=690537804 Score = 102 bits (112), Expect = 5e-16 Identities = 203/301 (67%), Gaps = 0/301 (0%) Strand=Plus/Minus Query 475872 ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931 ||||||| ||| |||| || || ||||| || | ||| | || ||| | || ||| | | Sbjct 214652127 ATATTGTGCTTCTTGATGTTACGCCACTGTCTCTTGGTTTGGAGACACTGGGTGGGGTGA 214652068 Query 475932 TGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCA 475991 |||| || |||| || || || | |||| | || ||| | || ||||| | Sbjct 214652067 TGACCAAGATTATCCCAAGGAACACAACCCTCCCTACCTCCAAGTCAGAGGTCTTTTCAA 214652008 Query 475992 CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCA 476051 | | ||||| || || | ||| || | | | |||| |||||| | || Sbjct 214652007 CGGCTGCTGATGGACAGACTAGTGTGGAGATTAATGTTCTCCAAGGAGAAAGAGAGTTTG 214651948 Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111 || || ||||| ||||| | || | ||||| || |||||||||||||| | | Sbjct 214651947 TTAGGGACAATAAATCCCTTGGTAGCTTCAGGCTTGATGGAATTCCTCCTGCTCCACGTG 214651888 Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTG 476171 | ||||| ||||||||||| | |||||||||||||| ||||| ||||| |||| ||| Sbjct 214651887 GTGTTCCCCAAATTGAAGTCAAGTTTGATATTGATGCCAATGGCATTCTGTCTGTTGCTG 214651828 Query 476172 C 476172 | Sbjct 214651827 C 214651827 >seq4 Length=803365466 Score = 100 bits (110), Expect = 2e-15 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 ||||| ||||| ||||| ||||| || || || | || || ||||| || || Sbjct 609329005 CGAAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTG 609329064 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | ||| || || ||||| ||||| || || ||||| || || || |||||||| || Sbjct 609329065 CGACCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCC 609329124 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAG 480730 |||||||| || ||||| |||||| ||||| || || | | | | || | |||| Sbjct 609329125 TCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAACCT-CAAG 609329183 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || || || ||||| ||||| ||||| || || Sbjct 609329184 GGTAATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTG 609329222 Score = 89.7 bits (98), Expect = 3e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | ||||| || ||||| || ||||| || || | || || || || |||| Sbjct 535550767 ATGCTGTTGTCACTGTACCTGCATACTTCAATGACTCGCAGAGGCAGGCTACCAAGGATG 535550826 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || ||||| || | ||||| | ||||| || ||||| |||||||| || || Sbjct 535550827 CTGGTGTCATTGCTGGCATCAATGTCCTCCGTATCATCAATGAGCCAACAGCCGCTGCCA 535550886 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 |||||||||||||||| ||||| Sbjct 535550887 TTGCTTATGGTCTTGACAAGAA 535550908 >seq7 Length=726427787 Score = 95.1 bits (104), Expect = 8e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | ||||| || || || || ||||| ||| | | || || || || |||| Sbjct 441266550 ATGCTGTTGTCACTGTCCCTGCCTACTTCAATGACTCTTAGAGGCAGGCCACCAAGGATG 441266609 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | ||| |||||||| || |||||| | || ||||| || || |||| || || || Sbjct 441266610 CTGGAGTGATTGCAGGCCTGAATGTTATGCGCATTATCAACGAGCCAATTGCTGCTGCTA 441266669 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 |||||||||||||||||||||| Sbjct 441266670 TTGCTTATGGTCTTGATAAGAA 441266691 >seq12 Length=703217322 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| || || ||||| || || || | || || || ||||| || Sbjct 176420049 ACGGAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGT 176420108 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || || ||||| ||||| || ||||| || || || || || ||||| || Sbjct 176420109 GCGACCATCCTCCAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGAATGCC 176420168 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||| || ||||| |||||| ||||| || |||| | | | || | ||| Sbjct 176420169 CTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACCT-CAA 176420227 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||| || || || ||||| ||||| ||||| || || Sbjct 176420228 GGGTAATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTG 176420267 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || || || ||||||||||| || |||||| | |||||||| || | || Sbjct 511296264 ACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTTTGGATGTTATAATCTGCCAAGGT 511296323 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || || ||||| || ||||| ||||| | || ||||||||||||||||| Sbjct 511296324 ACGCCCATCCTCCAGCTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAGGAATTCC 511296383 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||| || |||||| || ||| || || || || | | | | | |||| Sbjct 511296384 CTCCTTGTCCTGGATCTTTGCCTTCACATTATCGATGGTGTCGGAGCTCTCCA-CCTCAA 511296442 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||| || || || || | ||||| || ||||| || Sbjct 511296443 GAGTAATGGTCTTTCCAGTTAACGTCTTGACAAAAATCTG 511296482 Score = 86.0 bits (94), Expect = 4e-11 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | ||||| || ||||| || ||||| || || | || || || || |||| Sbjct 627009816 ATGCTGTTGTCACTGTACCTGCATACTTCAATGACTCGCAGAGGCAGGCTACCAAGGATG 627009757 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || ||||| || | ||||| | ||||| || || || |||||||| || || Sbjct 627009756 CTGGTGTCATTGCTGGCATCAATGTCCTCCGTATCATCAACGAGCCAACAGCTGCTGCCA 627009697 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 |||||||||||||||| ||||| Sbjct 627009696 TTGCTTATGGTCTTGACAAGAA 627009675 >seq1 Length=593586810 Score = 93.3 bits (102), Expect = 3e-13 Identities = 201/301 (67%), Gaps = 0/301 (0%) Strand=Plus/Plus Query 475872 ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931 ||||||| ||| |||| || || ||||| || | ||| | || ||| | || ||| | | Sbjct 187344257 ATATTGTGCTTCTTGATGTTACGCCACTGTCTCTTGGTTTGGAGACACTGGGTGGGGTGA 187344316 Query 475932 TGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCA 475991 |||| || |||| || || || | |||| || ||| | || ||||| | Sbjct 187344317 TGACCAAGATTATCCCAAGGAACACAACCCTCCCTACTTCGAAGTCAGAGGTCTTTTCAA 187344376 Query 475992 CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCA 476051 | | ||||| || || | ||| || | | | |||| |||||| | || Sbjct 187344377 CGGCTGCTGATGGACAGACTAGTGTGGAGATTAATGTTCTCCAAGGAGAAAGAGAGTTTG 187344436 Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111 || || ||||| ||||| | || | ||||| || |||||||||||||| | | Sbjct 187344437 TTAGGGACAATAAATCCCTTGGTAGCTTCAGGCTTGATGGAATTCCTCCTGCTCCGCGTG 187344496 Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTG 476171 | ||||| ||||||||||| | |||||||||||||| || || ||||| |||| ||| Sbjct 187344497 GTGTTCCCCAAATTGAAGTCAAGTTTGATATTGATGCCAACGGCATTCTGTCTGTTGCTG 187344556 Query 476172 C 476172 | Sbjct 187344557 C 187344557 >seq14 Length=755408349 Score = 91.5 bits (100), Expect = 1e-12 Identities = 154/222 (69%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||||||||| || || | || ||| || | ||| |||||||| || || Sbjct 639897939 ACGCAGACGGAGTACCAGGTGCAAGGTGGATTCCTTCTGGATATTGTAATCAGCAAGGGT 639897998 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | || ||||||||||| |||||||| || ||||| || || || || || || || Sbjct 639897999 GCGTCCGTCCTCAAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGCGGGATACC 639898058 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT---TC 480727 ||||| || || ||||| |||||| || || || |||| | || | || Sbjct 639898059 CTCCTTATCCTGGATCTTCGCCTTGACATTGTCGATCGTGTCAGAG---GACTCTACCTC 639898115 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || |||||||| |||||||| || || || Sbjct 639898116 AAGTGTGATGGTCTTGCCGGTGAGGGTCTTAACAAAGATCTG 639898157 Score = 91.5 bits (100), Expect = 1e-12 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 480560 GAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATC 480619 ||| || ||||| ||||| || || | ||| |||||||| || || | | ||| Sbjct 655250039 GAGCACCAGATGGAGTGTGGACTCCTTCTGGATATTGTAATCAGCAAGCGTCCGGCCATC 655250098 Query 480620 TTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTC 480679 || || || || |||||||| || ||||| || || || || || || || |||||||| Sbjct 655250099 CTCGAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTC 655250158 Query 480680 TTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGT 480739 || |||||| |||||| ||||| || |||| | ||||| || || || Sbjct 655250159 CTGGATCTTTGCCTTGACATTGTCAATTGTGTCAGAGGACTCGACCTCAAGTGTGATGGT 655250218 Query 480740 TTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || |||||||||||||| || || || || Sbjct 655250219 CTTCCCGGTGAGAGTCTTCACAAAGATCTG 655250248 Score = 89.7 bits (98), Expect = 3e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || | || || || ||||| | || ||||||||||| || Sbjct 638037928 ACGGAGACGGAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGCTAGTGT 638037869 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || |||||||| |||||||| || || || || || || || || || || Sbjct 638037868 CCGCCCATCCTCGAGTTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCCGGCGGGATACC 638037809 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||| || || |||||| |||||| ||||| || |||| | ||||| Sbjct 638037808 CTCCTTATCCTGGATCTTTGCCTTGACATTGTCAATTGTGTCAGAGGACTCGACCTCAAG 638037749 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || |||||||| ||||| || ||||| || Sbjct 638037748 TGTGATGGTCTTGCCGGTGAGCGTCTTCACAAAAATCTG 638037710 >seq13 Length=727576108 Score = 91.5 bits (100), Expect = 1e-12 Identities = 156/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || | || || | ||||| || || |||||||| | ||| Sbjct 657438319 ACGGAGACGGAGAACCAAGTGGAGGGCGGACTCTTTCTGAATGTTGTAATCAGCAAAAGT 657438260 Query 480611 TCTGTT-ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669 ||| ||| ||||||||||| || ||||| || | || || || || || || || | Sbjct 657438259 G-TGTCCATCCTCAAGTTGCTTGCCGGCAAATATCAACCGCTGCTGGTCTGGGGGGATGC 657438201 Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCA 480728 | ||||||||||| ||||| ||||||| ||||| ||||| | | | || || Sbjct 657438200 CCTCCTTGTCTTGGATCTTCGCTTTGACATTGTCAATCGTATCGGAAGACTCAA-CCTCG 657438142 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || |||||||| ||||| || || ||||| Sbjct 657438141 AGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATTTG 657438101 Score = 89.7 bits (98), Expect = 3e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| ||||| || || || || || || || | || || ||||| || || Sbjct 643167719 ACGAAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGT 643167778 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || || ||||| |||||||| || |||||||| || || ||||| || || Sbjct 643167779 GCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCCGGAGGGATGCC 643167838 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||| || ||||| || ||| ||||| || || | | ||||| Sbjct 643167839 TTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATTGTGTCCGAGGACTCGACCTCAAG 643167898 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || |||||||| ||||| || ||||| || Sbjct 643167899 TGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTG 643167937 Score = 89.7 bits (98), Expect = 3e-12 Identities = 127/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 |||||||||||||| || | | ||||||||| ||||| ||||| || || ||||| || Sbjct 658881064 TTATAATCAGCTAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGC 658881123 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || || || || || ||||| || || ||||| |||||| || || || ||| Sbjct 658881124 TGGTCCGGCGGGATACCCTCCTTATCCTGGATCTTCGCCTTGACATTGTCGATCGTGTCA 658881183 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | ||||| || || || || |||||||| ||||| || || || || Sbjct 658881184 G-GACTCTA-CCTCAAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTG 658881237 >seq11 Length=621432051 Score = 91.5 bits (100), Expect = 1e-12 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || || ||||| |||||||| || || || || || || || ||||| || ||||| Sbjct 106899895 ATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT 106899954 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735 |||||| ||||| |||||| || || || |||| | | | || |||||||| | Sbjct 106899955 GTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCTCTCAA-CCTCAAGGGTGA 106900013 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || || ||||| ||||| ||||| || || Sbjct 106900014 TAGTCTTTCCAGTGAGGGTCTTCACGAAGATCTG 106900047 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || || || ||||||||||| || |||||| | |||||||| || | || Sbjct 492790272 ACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTTTGGATGTTATAATCTGCCAAGGT 492790331 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || |||||||| || ||||| ||||| | || ||||| ||||||||||| Sbjct 492790332 ACGCCCATCCTCCAGTTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAGGAATTCC 492790391 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||| || ||||| || ||| ||||| || || | | | | | |||| Sbjct 492790392 CTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCCA-CCTCAA 492790450 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || || | ||||| || ||||| || Sbjct 492790451 GAGTGATGGTCTTTCCAGTTAATGTCTTGACAAAAATCTG 492790490 Score = 86.0 bits (94), Expect = 4e-11 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | ||||| || ||||| || ||||| || || | || || || || |||| Sbjct 570753483 ATGCTGTTGTCACTGTACCTGCATACTTCAATGACTCGCAGAGGCAGGCTACCAAGGATG 570753424 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || ||||| || | ||||| | ||||| || || || |||||||| || || Sbjct 570753423 CTGGTGTCATTGCTGGCATCAATGTCCTCCGTATCATCAACGAGCCAACAGCTGCTGCCA 570753364 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 |||||||||||||||| ||||| Sbjct 570753363 TTGCTTATGGTCTTGACAAGAA 570753342 >seq8 Length=673896466 Score = 89.7 bits (98), Expect = 3e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | ||||| || || || || ||||| || || | || || || || |||| Sbjct 185073404 ATGCTGTGGTCACTGTCCCCGCCTACTTCAATGACTCCCAGAGGCAGGCCACCAAGGATG 185073345 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | ||| |||||||| || |||||| | || || || || || ||||| || || || Sbjct 185073344 CTGGAGTGATTGCAGGCCTAAATGTTATGCGCATCATCAACGAGCCAACCGCTGCTGCTA 185073285 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 |||||||||||||||| ||||| Sbjct 185073284 TTGCTTATGGTCTTGACAAGAA 185073263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3261782119141832