Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 132 3e-25
seq9 111 1e-18
seq3 111 1e-18
seq10 107 1e-17
seq2 102 5e-16
seq4 100 2e-15
seq7 95.1 8e-14
seq12 93.3 3e-13
seq1 93.3 3e-13
seq14 91.5 1e-12
seq13 91.5 1e-12
seq11 91.5 1e-12
seq8 89.7 3e-12
>seq129631
Length=630463
Score = 132 bits (146), Expect = 3e-25
Identities = 157/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 474665 CAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTT-GGACA 474723
||||||||| || || ||| ||||||||| |||| || || | ||| ||| |
Sbjct 551420 CAAATTTCTGCAGAAGTGTTAAAAAAAATGAAAAAAACTGC-AGAAGACTACTTAGGAGA 551478
Query 474724 AGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGC 474783
| ||| | || ||||| ||||| ||||| || |||||||||||| |||| | |||||
Sbjct 551479 ATCAGTGAAAGAAGCAGTTATTACAGTTCCTGCCTATTTTAATGATGCTCAGAGACAAGC 551538
Query 474784 AACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAAC 474843
|||||| ||||| || ||||||||||| | | || | | |||||||| ||||| ||
Sbjct 551539 AACTAAGGATGCTGGTAGAATTGCAGGATTAGAAGTCAAAAGAATTATTAACGAACCTAC 551598
Query 474844 AGCAGCCGCACTTGCTTATGGTCTTGATAA 474873
||| || || |||||||||||| | |||||
Sbjct 551599 AGCTGCAGCGCTTGCTTATGGTTTAGATAA 551628
Score = 120 bits (132), Expect = 2e-21
Identities = 256/377 (68%), Gaps = 19/377 (5%)
Strand=Plus/Plus
Query 475785 AAAG-TGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTA 475843
|||| ||| ||||| |||||||| |||||| ||| ||||| || |||| || | | |
Sbjct 552167 AAAGATGTTAATCCAGATGAAGCGGTTGCAGTTGGTGCTGCAGTTCAAGGAGGTGTACTT 552226
Query 475844 TCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCA 475903
||||| || |||| | | || || | |||| ||||||||| | |||
Sbjct 552227 TCAGGC-----------GATGTTAAAGA-TGTTTTATTGCTTGATGTAACTCCATTGTCA 552274
Query 475904 TTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATC 475963
||||| |||| || | || || || |||||| || || | | ||| || ||||
Sbjct 552275 TTAGGAATTGAGACTATGGGGGGTATAATGACTTCACTGATAAATAAAAACACAACTATT 552334
Query 475964 CCATGCAAAAAATCAA-AAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCAT 476022
|| | | ||| || |||| ||||| || ||||||||| | ||||||| ||
Sbjct 552335 CC-TACTAAACATAGTCAAGTTTTTTCAACAGCAGAAGATAATCAATCCGCTGTAACAAT 552393
Query 476023 CCAAATCTTTGAAGGTGAAAGAAAATT--CACTAAAGATAATAACAAACTTGGAACTTTT 476080
|| || || |||||||||||||| ||||| ||||| || || || |||
Sbjct 552394 ACATATTCTTCAAGGTGAAAGAAAAAGAGCACTA--GATAACAAATCTCTAGGTCAATTT 552451
Query 476081 AATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGAT 476140
||||| || || ||| || || || |||||| | |||||||||||||| ||||||
Sbjct 552452 AATCTAGACGGAATTGAGCCAGCACCAAGAGGAACAGCACAAATTGAAGTTACATTTGAT 552511
Query 476141 ATTGATGCAAATGGTAT 476157
|||||| | |||||||
Sbjct 552512 ATTGATTCCGATGGTAT 552528
Score = 100 bits (110), Expect = 2e-15
Identities = 135/186 (73%), Gaps = 4/186 (2%)
Strand=Plus/Minus
Query 290843 GCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAATCT 290902
|| ||||| ||||| || ||||||||| || || | ||||||||| | | | |||
Sbjct 551604 GCAGCTGTAGGTTCGTTAATAATTCTTTTGACTTCTAATCCTGCAATTCTACCAGCATCC 551545
Query 290903 AAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCtttttcc 290962
|||||| || | || |||||||||||||| ||||| ||||||||||| |||| || |
Sbjct 551544 TTAGTTGCTTGTCTCTGAGCATCATTAAAATAGGCAGGAACTGTAATAACTGCTTCTTTC 551485
Query 290963 act--ttctttttcaaataattttctgccatttgttttatttcTATAAGTATTTGTGCGC 291020
||| |||| | || || | |||||| ||| ||| |||| | | | | || |||
Sbjct 551484 ACTGATTCTCCT--AAGTAGTCTTCTGCAGTTTTTTTCATTTTTTTTAACACTTCTGCAG 551427
Query 291021 AAATTT 291026
||||||
Sbjct 551426 AAATTT 551421
>seq9
Length=700855599
Score = 111 bits (122), Expect = 1e-18
Identities = 167/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 474647 AAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC- 474705
|| || |||||| | ||| |||||||||| ||||| | ||| ||| | | |||
Sbjct 644717878 AAGCAGTTTTCAGCTGAAGAAATTTCTTCCATGGTCCTCATCAAGATGCGTGAGATCGCT 644717937
Query 474706 GAGCTCATATCTTGGAC-AAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTA 474764
||| | || || ||| || | ||| |||| || | ||||| || || || || |
Sbjct 644717938 GAGG-CTTACCTAGGAGTAACTATTAAGA-ATGCTGTTGTCACTGTGCCTGCTTACTTCA 644717995
Query 474765 ATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTAC 474824
||||||| || | || ||||| || ||||| || ||||| ||||||||||| | |
Sbjct 644717996 ATGATTCCCAGAGGCAGGCAACCAAGGATGCTGGTGTTATTGCTGGTCTTAATGTGATGC 644718055
Query 474825 GTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876
|||| || || || ||||||||||| ||| |||| ||||||||||| |||||
Sbjct 644718056 GTATCATCAACGAGCCAACAGCAGCTGCAATTGCCTATGGTCTTGACAAGAA 644718107
Score = 91.5 bits (100), Expect = 1e-12
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803
|||| |||||||| || || ||||| || || | |||||| || ||||| || | |
Sbjct 172664382 TTACCGTTCCAGCGTACTTCAATGACTCGCAGAGAACAGCAACAAAGGATGCTGGCCGTA 172664441
Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863
||||||| || | ||| | || ||||| ||||| ||||| || || | ||||||||||
Sbjct 172664442 TTGCAGGGCTGGAAGTTCTGCGCATTATAAATGAGCCAACTGCTGCATCTCTTGCTTATG 172664501
Query 474864 GTCTTGATAAGAA 474876
|| |||| |||||
Sbjct 172664502 GTTTTGAGAAGAA 172664514
Score = 87.8 bits (96), Expect = 1e-11
Identities = 135/193 (70%), Gaps = 10/193 (5%)
Strand=Plus/Minus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || | ||||| || ||||| || ||||| || || | || || || || ||||
Sbjct 103793563 ATGCTGTTGTCACTGTACCTGCATACTTCAATGACTCGCAGAGGCAGGCTACCAAGGATG 103793504
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| || ||||| || | ||||| | ||||| || || || |||||||| || ||
Sbjct 103793503 CTGGTGTCATTGCTGGCATCAATGTCCTTCGTATCATCAACGAGCCAACAGCTGCTGCCA 103793444
Query 474855 TTGCTTATGGTCTTGATAAGAATTCTGACA--------AAGAAGTAAATGTTTTAATCTT 474906
|||||||||||||||| ||||| || || ||||| ||||| | |||||
Sbjct 103793443 TTGCTTATGGTCTTGACAAGAAGGCTTCCAGTGTTGGTGAGAAG--AATGTCCTCATCTT 103793386
Query 474907 TGATTGTGGAGGT 474919
|||| |||||||
Sbjct 103793385 TGATCTTGGAGGT 103793373
>seq3
Length=775183943
Score = 111 bits (122), Expect = 1e-18
Identities = 158/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||||||||| || ||||| ||||| || || || | || || ||||| || ||
Sbjct 659680156 ACGAAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGT 659680215
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||| || || ||||| |||||||| || ||||||||||| || |||||||| ||
Sbjct 659680216 GCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGTTGTTGGTCTGGAGGAATGCC 659680275
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729
|||||||| || |||| |||||| | || || || || | | | | || ||||
Sbjct 659680276 CTCCTTGTCCTGGCTCTTGGCCTTGACATCGTCGATGGTGTCGGAGCTCTCAA-CCTCAA 659680334
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||| || || || || ||||| ||||| ||||| || ||
Sbjct 659680335 GGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTG 659680374
>seq10
Length=712180895
Score = 107 bits (118), Expect = 1e-17
Identities = 109/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || | || || || || || || |||||||| || | || ||||| || ||||
Sbjct 660585769 ATGCTGTTGTCACCGTGCCTGCTTACTTCAATGATTCCCAGAGGCAGGCAACCAAGGATG 660585828
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| || ||||| ||||||||||| | ||||| || || || ||||||||||| |||
Sbjct 660585829 CCGGTGTTATTGCTGGTCTTAATGTGATGCGTATCATCAACGAGCCAACAGCAGCTGCAA 660585888
Query 474855 TTGCTTATGGTCTTGATAAGAA 474876
|||||||||||||||| |||||
Sbjct 660585889 TTGCTTATGGTCTTGACAAGAA 660585910
Score = 91.5 bits (100), Expect = 1e-12
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803
|||| |||||||| || || ||||| || || | |||||| || ||||| || | |
Sbjct 192542786 TTACCGTTCCAGCGTACTTCAATGACTCGCAGAGAACAGCAACAAAGGATGCTGGCCGTA 192542845
Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863
||||||| || | ||| | || ||||| ||||| ||||| || || | ||||||||||
Sbjct 192542846 TTGCAGGGCTGGAAGTTCTCCGCATTATAAATGAGCCAACTGCTGCATCTCTTGCTTATG 192542905
Query 474864 GTCTTGATAAGAA 474876
|| |||| |||||
Sbjct 192542906 GTTTTGAGAAGAA 192542918
Score = 87.8 bits (96), Expect = 1e-11
Identities = 135/193 (70%), Gaps = 10/193 (5%)
Strand=Plus/Minus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || | ||||| || ||||| || ||||| || || | || || || || ||||
Sbjct 116645077 ATGCTGTTGTCACTGTACCTGCATACTTCAATGACTCGCAGAGGCAGGCTACCAAGGATG 116645018
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| || ||||| || | ||||| | ||||| || || || |||||||| || ||
Sbjct 116645017 CTGGTGTCATTGCTGGCATCAATGTCCTTCGTATCATCAACGAGCCAACAGCTGCTGCCA 116644958
Query 474855 TTGCTTATGGTCTTGATAAGAATTCTGACA--------AAGAAGTAAATGTTTTAATCTT 474906
|||||||||||||||| ||||| || || ||||| ||||| | |||||
Sbjct 116644957 TTGCTTATGGTCTTGACAAGAAGGCTTCCAGTGTTGGTGAGAAG--AATGTCCTCATCTT 116644900
Query 474907 TGATTGTGGAGGT 474919
|||| |||||||
Sbjct 116644899 TGATCTTGGAGGT 116644887
>seq2
Length=690537804
Score = 102 bits (112), Expect = 5e-16
Identities = 203/301 (67%), Gaps = 0/301 (0%)
Strand=Plus/Minus
Query 475872 ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931
||||||| ||| |||| || || ||||| || | ||| | || ||| | || ||| | |
Sbjct 214652127 ATATTGTGCTTCTTGATGTTACGCCACTGTCTCTTGGTTTGGAGACACTGGGTGGGGTGA 214652068
Query 475932 TGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCA 475991
|||| || |||| || || || | |||| | || ||| | || ||||| |
Sbjct 214652067 TGACCAAGATTATCCCAAGGAACACAACCCTCCCTACCTCCAAGTCAGAGGTCTTTTCAA 214652008
Query 475992 CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCA 476051
| | ||||| || || | ||| || | | | |||| |||||| | ||
Sbjct 214652007 CGGCTGCTGATGGACAGACTAGTGTGGAGATTAATGTTCTCCAAGGAGAAAGAGAGTTTG 214651948
Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111
|| || ||||| ||||| | || | ||||| || |||||||||||||| | |
Sbjct 214651947 TTAGGGACAATAAATCCCTTGGTAGCTTCAGGCTTGATGGAATTCCTCCTGCTCCACGTG 214651888
Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTG 476171
| ||||| ||||||||||| | |||||||||||||| ||||| ||||| |||| |||
Sbjct 214651887 GTGTTCCCCAAATTGAAGTCAAGTTTGATATTGATGCCAATGGCATTCTGTCTGTTGCTG 214651828
Query 476172 C 476172
|
Sbjct 214651827 C 214651827
>seq4
Length=803365466
Score = 100 bits (110), Expect = 2e-15
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
||||| ||||| ||||| ||||| || || || | || || ||||| || ||
Sbjct 609329005 CGAAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTG 609329064
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
| ||| || || ||||| ||||| || || ||||| || || || |||||||| ||
Sbjct 609329065 CGACCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCC 609329124
Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAG 480730
|||||||| || ||||| |||||| ||||| || || | | | | || | ||||
Sbjct 609329125 TCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAACCT-CAAG 609329183
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||||| || || || ||||| ||||| ||||| || ||
Sbjct 609329184 GGTAATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTG 609329222
Score = 89.7 bits (98), Expect = 3e-12
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || | ||||| || ||||| || ||||| || || | || || || || ||||
Sbjct 535550767 ATGCTGTTGTCACTGTACCTGCATACTTCAATGACTCGCAGAGGCAGGCTACCAAGGATG 535550826
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| || ||||| || | ||||| | ||||| || ||||| |||||||| || ||
Sbjct 535550827 CTGGTGTCATTGCTGGCATCAATGTCCTCCGTATCATCAATGAGCCAACAGCCGCTGCCA 535550886
Query 474855 TTGCTTATGGTCTTGATAAGAA 474876
|||||||||||||||| |||||
Sbjct 535550887 TTGCTTATGGTCTTGACAAGAA 535550908
>seq7
Length=726427787
Score = 95.1 bits (104), Expect = 8e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || | ||||| || || || || ||||| ||| | | || || || || ||||
Sbjct 441266550 ATGCTGTTGTCACTGTCCCTGCCTACTTCAATGACTCTTAGAGGCAGGCCACCAAGGATG 441266609
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| ||| |||||||| || |||||| | || ||||| || || |||| || || ||
Sbjct 441266610 CTGGAGTGATTGCAGGCCTGAATGTTATGCGCATTATCAACGAGCCAATTGCTGCTGCTA 441266669
Query 474855 TTGCTTATGGTCTTGATAAGAA 474876
||||||||||||||||||||||
Sbjct 441266670 TTGCTTATGGTCTTGATAAGAA 441266691
>seq12
Length=703217322
Score = 93.3 bits (102), Expect = 3e-13
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| || ||||| || || ||||| || || || | || || || ||||| ||
Sbjct 176420049 ACGGAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGT 176420108
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||| || || ||||| ||||| || ||||| || || || || || ||||| ||
Sbjct 176420109 GCGACCATCCTCCAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGAATGCC 176420168
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729
|||||||| || ||||| |||||| ||||| || |||| | | | || | |||
Sbjct 176420169 CTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACCT-CAA 176420227
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||||| || || || ||||| ||||| ||||| || ||
Sbjct 176420228 GGGTAATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTG 176420267
Score = 93.3 bits (102), Expect = 3e-13
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| || || || ||||||||||| || |||||| | |||||||| || | ||
Sbjct 511296264 ACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTTTGGATGTTATAATCTGCCAAGGT 511296323
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||| || || ||||| || ||||| ||||| | || |||||||||||||||||
Sbjct 511296324 ACGCCCATCCTCCAGCTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAGGAATTCC 511296383
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729
|||||||| || |||||| || ||| || || || || | | | | | ||||
Sbjct 511296384 CTCCTTGTCCTGGATCTTTGCCTTCACATTATCGATGGTGTCGGAGCTCTCCA-CCTCAA 511296442
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| ||||| || || || || | ||||| || ||||| ||
Sbjct 511296443 GAGTAATGGTCTTTCCAGTTAACGTCTTGACAAAAATCTG 511296482
Score = 86.0 bits (94), Expect = 4e-11
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || | ||||| || ||||| || ||||| || || | || || || || ||||
Sbjct 627009816 ATGCTGTTGTCACTGTACCTGCATACTTCAATGACTCGCAGAGGCAGGCTACCAAGGATG 627009757
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| || ||||| || | ||||| | ||||| || || || |||||||| || ||
Sbjct 627009756 CTGGTGTCATTGCTGGCATCAATGTCCTCCGTATCATCAACGAGCCAACAGCTGCTGCCA 627009697
Query 474855 TTGCTTATGGTCTTGATAAGAA 474876
|||||||||||||||| |||||
Sbjct 627009696 TTGCTTATGGTCTTGACAAGAA 627009675
>seq1
Length=593586810
Score = 93.3 bits (102), Expect = 3e-13
Identities = 201/301 (67%), Gaps = 0/301 (0%)
Strand=Plus/Plus
Query 475872 ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931
||||||| ||| |||| || || ||||| || | ||| | || ||| | || ||| | |
Sbjct 187344257 ATATTGTGCTTCTTGATGTTACGCCACTGTCTCTTGGTTTGGAGACACTGGGTGGGGTGA 187344316
Query 475932 TGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCA 475991
|||| || |||| || || || | |||| || ||| | || ||||| |
Sbjct 187344317 TGACCAAGATTATCCCAAGGAACACAACCCTCCCTACTTCGAAGTCAGAGGTCTTTTCAA 187344376
Query 475992 CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCA 476051
| | ||||| || || | ||| || | | | |||| |||||| | ||
Sbjct 187344377 CGGCTGCTGATGGACAGACTAGTGTGGAGATTAATGTTCTCCAAGGAGAAAGAGAGTTTG 187344436
Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111
|| || ||||| ||||| | || | ||||| || |||||||||||||| | |
Sbjct 187344437 TTAGGGACAATAAATCCCTTGGTAGCTTCAGGCTTGATGGAATTCCTCCTGCTCCGCGTG 187344496
Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTG 476171
| ||||| ||||||||||| | |||||||||||||| || || ||||| |||| |||
Sbjct 187344497 GTGTTCCCCAAATTGAAGTCAAGTTTGATATTGATGCCAACGGCATTCTGTCTGTTGCTG 187344556
Query 476172 C 476172
|
Sbjct 187344557 C 187344557
>seq14
Length=755408349
Score = 91.5 bits (100), Expect = 1e-12
Identities = 154/222 (69%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||||||||| || || | || ||| || | ||| |||||||| || ||
Sbjct 639897939 ACGCAGACGGAGTACCAGGTGCAAGGTGGATTCCTTCTGGATATTGTAATCAGCAAGGGT 639897998
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| || ||||||||||| |||||||| || ||||| || || || || || || ||
Sbjct 639897999 GCGTCCGTCCTCAAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGCGGGATACC 639898058
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT---TC 480727
||||| || || ||||| |||||| || || || |||| | || | ||
Sbjct 639898059 CTCCTTATCCTGGATCTTCGCCTTGACATTGTCGATCGTGTCAGAG---GACTCTACCTC 639898115
Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| || || || || |||||||| |||||||| || || ||
Sbjct 639898116 AAGTGTGATGGTCTTGCCGGTGAGGGTCTTAACAAAGATCTG 639898157
Score = 91.5 bits (100), Expect = 1e-12
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 480560 GAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATC 480619
||| || ||||| ||||| || || | ||| |||||||| || || | | |||
Sbjct 655250039 GAGCACCAGATGGAGTGTGGACTCCTTCTGGATATTGTAATCAGCAAGCGTCCGGCCATC 655250098
Query 480620 TTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTC 480679
|| || || || |||||||| || ||||| || || || || || || || ||||||||
Sbjct 655250099 CTCGAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTC 655250158
Query 480680 TTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGT 480739
|| |||||| |||||| ||||| || |||| | ||||| || || ||
Sbjct 655250159 CTGGATCTTTGCCTTGACATTGTCAATTGTGTCAGAGGACTCGACCTCAAGTGTGATGGT 655250218
Query 480740 TTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| |||||||||||||| || || || ||
Sbjct 655250219 CTTCCCGGTGAGAGTCTTCACAAAGATCTG 655250248
Score = 89.7 bits (98), Expect = 3e-12
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| || | || || || ||||| | || ||||||||||| ||
Sbjct 638037928 ACGGAGACGGAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGCTAGTGT 638037869
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||| || |||||||| |||||||| || || || || || || || || || ||
Sbjct 638037868 CCGCCCATCCTCGAGTTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCCGGCGGGATACC 638037809
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||| || || |||||| |||||| ||||| || |||| | |||||
Sbjct 638037808 CTCCTTATCCTGGATCTTTGCCTTGACATTGTCAATTGTGTCAGAGGACTCGACCTCAAG 638037749
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || |||||||| ||||| || ||||| ||
Sbjct 638037748 TGTGATGGTCTTGCCGGTGAGCGTCTTCACAAAAATCTG 638037710
>seq13
Length=727576108
Score = 91.5 bits (100), Expect = 1e-12
Identities = 156/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| || | || || | ||||| || || |||||||| | |||
Sbjct 657438319 ACGGAGACGGAGAACCAAGTGGAGGGCGGACTCTTTCTGAATGTTGTAATCAGCAAAAGT 657438260
Query 480611 TCTGTT-ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669
||| ||| ||||||||||| || ||||| || | || || || || || || || |
Sbjct 657438259 G-TGTCCATCCTCAAGTTGCTTGCCGGCAAATATCAACCGCTGCTGGTCTGGGGGGATGC 657438201
Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCA 480728
| ||||||||||| ||||| ||||||| ||||| ||||| | | | || ||
Sbjct 657438200 CCTCCTTGTCTTGGATCTTCGCTTTGACATTGTCAATCGTATCGGAAGACTCAA-CCTCG 657438142
Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||| || || || |||||||| ||||| || || |||||
Sbjct 657438141 AGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATTTG 657438101
Score = 89.7 bits (98), Expect = 3e-12
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||| ||||| || || || || || || || | || || ||||| || ||
Sbjct 643167719 ACGAAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGT 643167778
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||| || || ||||| |||||||| || |||||||| || || ||||| || ||
Sbjct 643167779 GCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCCGGAGGGATGCC 643167838
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||||||| || ||||| || ||| ||||| || || | | |||||
Sbjct 643167839 TTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATTGTGTCCGAGGACTCGACCTCAAG 643167898
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || |||||||| ||||| || ||||| ||
Sbjct 643167899 TGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTG 643167937
Score = 89.7 bits (98), Expect = 3e-12
Identities = 127/176 (72%), Gaps = 2/176 (1%)
Strand=Plus/Plus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|||||||||||||| || | | ||||||||| ||||| ||||| || || ||||| ||
Sbjct 658881064 TTATAATCAGCTAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGC 658881123
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| || || || || || ||||| || || ||||| |||||| || || || |||
Sbjct 658881124 TGGTCCGGCGGGATACCCTCCTTATCCTGGATCTTCGCCTTGACATTGTCGATCGTGTCA 658881183
Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | ||||| || || || || |||||||| ||||| || || || ||
Sbjct 658881184 G-GACTCTA-CCTCAAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTG 658881237
>seq11
Length=621432051
Score = 91.5 bits (100), Expect = 1e-12
Identities = 114/154 (74%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| || || ||||| |||||||| || || || || || || || ||||| || |||||
Sbjct 106899895 ATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT 106899954
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735
|||||| ||||| |||||| || || || |||| | | | || |||||||| |
Sbjct 106899955 GTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCTCTCAA-CCTCAAGGGTGA 106900013
Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||| || || ||||| ||||| ||||| || ||
Sbjct 106900014 TAGTCTTTCCAGTGAGGGTCTTCACGAAGATCTG 106900047
Score = 87.8 bits (96), Expect = 1e-11
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| || || || ||||||||||| || |||||| | |||||||| || | ||
Sbjct 492790272 ACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTTTGGATGTTATAATCTGCCAAGGT 492790331
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||| || |||||||| || ||||| ||||| | || ||||| |||||||||||
Sbjct 492790332 ACGCCCATCCTCCAGTTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAGGAATTCC 492790391
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729
|||||||| || ||||| || ||| ||||| || || | | | | | ||||
Sbjct 492790392 CTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCCA-CCTCAA 492790450
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || || || || || | ||||| || ||||| ||
Sbjct 492790451 GAGTGATGGTCTTTCCAGTTAATGTCTTGACAAAAATCTG 492790490
Score = 86.0 bits (94), Expect = 4e-11
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || | ||||| || ||||| || ||||| || || | || || || || ||||
Sbjct 570753483 ATGCTGTTGTCACTGTACCTGCATACTTCAATGACTCGCAGAGGCAGGCTACCAAGGATG 570753424
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| || ||||| || | ||||| | ||||| || || || |||||||| || ||
Sbjct 570753423 CTGGTGTCATTGCTGGCATCAATGTCCTCCGTATCATCAACGAGCCAACAGCTGCTGCCA 570753364
Query 474855 TTGCTTATGGTCTTGATAAGAA 474876
|||||||||||||||| |||||
Sbjct 570753363 TTGCTTATGGTCTTGACAAGAA 570753342
>seq8
Length=673896466
Score = 89.7 bits (98), Expect = 3e-12
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || | ||||| || || || || ||||| || || | || || || || ||||
Sbjct 185073404 ATGCTGTGGTCACTGTCCCCGCCTACTTCAATGACTCCCAGAGGCAGGCCACCAAGGATG 185073345
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| ||| |||||||| || |||||| | || || || || || ||||| || || ||
Sbjct 185073344 CTGGAGTGATTGCAGGCCTAAATGTTATGCGCATCATCAACGAGCCAACCGCTGCTGCTA 185073285
Query 474855 TTGCTTATGGTCTTGATAAGAA 474876
|||||||||||||||| |||||
Sbjct 185073284 TTGCTTATGGTCTTGACAAGAA 185073263
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3261782119141832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |