Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_020416.1
Length=160221
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 192 6e-44
>seq129631
Length=630463
Score = 192 bits (212), Expect = 6e-44
Identities = 322/466 (69%), Gaps = 0/466 (0%)
Strand=Plus/Minus
Query 133783 CATCAAATCATTGATTTGCAGACCGTAATCTAGATGACGAATGCGGTTTTCATCTACACC 133842
||| || | ||| ||||| | | | ||||| |||||||| | | ||||| || | ||
Sbjct 522625 CATTAATTTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCC 522566
Query 133843 TTTGTTGTTCTTTAATACCAACAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAG 133902
| | || || ||||| || || | ||||||| || |||||||| ||||| ||| |||
Sbjct 522565 TCTATTATTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAAC 522506
Query 133903 AGTAGCTGCACCACCACGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATG 133962
||| || || || || | || || ||||||||||||||||||||||| | || || ||
Sbjct 522505 AGTTGCGGCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTG 522446
Query 133963 TTTCCAGAAAGGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTC 134022
||| | |||||||| || ||||| | |||| ||||| | || |||
Sbjct 522445 TTTATAAAAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAA 522386
Query 134023 AGCTCGAATCATACCGGCGTTGATGCCGATACCAGCTCGCTTGCTGATATACTTAATAAT 134082
||||||||| ||| ||||| ||||| || || ||||| | | ||| || | |||
Sbjct 522385 AGCTCGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAAT 522326
Query 134083 ACTGTTACTTGCCGCATTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGA 134142
|| ||| ||||||||||| || | ||| || |||||| | ||||||||
Sbjct 522325 TGCACTAGTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGA 522266
Query 134143 ACTAAACTGACGAGTAGGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAATCTG 134202
|||||| |||||||| || || | | |||| |||||||||||| || | || || |
Sbjct 522265 ACTAAATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTT 522206
Query 134203 GCGAGTAGATACAGCATCATAAAAACGAATAATATGAGCCAGACGA 134248
||| || | |||| |||||| || ||||| | || ||||
Sbjct 522205 AAAAGTGGAAATTGCATTATAAAAGCGCTGAATATAATTCATACGA 522160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511623662669840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |