Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_021067.1
Length=135982
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 93.3 4e-14
>seq129631
Length=630463
Score = 93.3 bits (102), Expect = 4e-14
Identities = 132/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 3018 AGCAATTGCATTGATGGTTAGATCACGTCTACGTAAATCCTCTTCCAGTGTAACCCCA-- 3075
|||||| ||||| || || | |||||||||| |||||| ||||| || ||||| ||
Sbjct 13093 AGCAATAGCATTAATAGTCAAATCACGTCTAATTAAATCTTCTTCTAGCGTAACATCAGA 13152
Query 3076 -TCCCACTCACAAGTAAAGCCTTCATAACCCGTACCCGTCTTACGATCTGTTCTGGCAAG 3134
|| | ||| | ||| || ||| || |||| | ||| | ||| |||| || |
Sbjct 13153 ATCAAATTCAGTATGAAAACCAGTATATCCTCTACCAGACTTTCTTTCTTTTCTTGCTAA 13212
Query 3135 AGCATACTCATCTCCGGTTTCTGGATGTAAGAATACGGGAAAGTCTTTACCTACCTGCTT 3194
||||| || || |||||||||||||| || || ||||| ||||| ||||| || ||
Sbjct 13213 TGCATATTCTTCGTGTGTTTCTGGATGTAAAAAAACAGGAAAATCTTTTCCTACTTG-TT 13271
Query 3195 GAAA 3198
||||
Sbjct 13272 GAAA 13275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434203457030880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |