Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_021067.1 Length=135982 Score E Sequences producing significant alignments: (Bits) Value seq129631 93.3 4e-14 >seq129631 Length=630463 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 3018 AGCAATTGCATTGATGGTTAGATCACGTCTACGTAAATCCTCTTCCAGTGTAACCCCA-- 3075 |||||| ||||| || || | |||||||||| |||||| ||||| || ||||| || Sbjct 13093 AGCAATAGCATTAATAGTCAAATCACGTCTAATTAAATCTTCTTCTAGCGTAACATCAGA 13152 Query 3076 -TCCCACTCACAAGTAAAGCCTTCATAACCCGTACCCGTCTTACGATCTGTTCTGGCAAG 3134 || | ||| | ||| || ||| || |||| | ||| | ||| |||| || | Sbjct 13153 ATCAAATTCAGTATGAAAACCAGTATATCCTCTACCAGACTTTCTTTCTTTTCTTGCTAA 13212 Query 3135 AGCATACTCATCTCCGGTTTCTGGATGTAAGAATACGGGAAAGTCTTTACCTACCTGCTT 3194 ||||| || || |||||||||||||| || || ||||| ||||| ||||| || || Sbjct 13213 TGCATATTCTTCGTGTGTTTCTGGATGTAAAAAAACAGGAAAATCTTTTCCTACTTG-TT 13271 Query 3195 GAAA 3198 |||| Sbjct 13272 GAAA 13275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434203457030880