Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq129631 167 7e-36 seq4 147 6e-30 seq3 147 6e-30 seq13 141 3e-28 seq10 141 3e-28 seq9 141 3e-28 seq14 140 1e-27 seq11 102 2e-16 seq5 98.7 3e-15 seq55813 96.9 1e-14 seq6 84.2 6e-11 >seq129631 Length=630463 Score = 167 bits (184), Expect = 7e-36 Identities = 343/504 (68%), Gaps = 12/504 (2%) Strand=Plus/Minus Query 288852 ATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGC 288911 |||||| | ||||| |||| ||| || || ||||| | || | || || || || || Sbjct 300264 ATCAAAACGACCAGGACGAAGTAAAGCAGGATCTAAAACGTCTGGCCTATTAGTAGCAGC 300205 Query 288912 CAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAA--ATTTGATTA 288969 | || || || | ||| | |||||||||||||| || || |||||||| Sbjct 300204 TATTAAAATAACACCTTCATTACCATTAAATCCATCCAT--TTCCACAAGCATTTGATTT 300147 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029 | ||||||||| |||||||||| ||| | | |||| | | | |||| | Sbjct 300146 AATGTTTGTTCTCTTTCATCATGGCCACCACCT-AATCC-----AGCACCTCTTTGACGA 300093 Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 ||||| ||||||||||| ||||| || || | ||| || | | || ||| ||| | || Sbjct 300092 CCAACTGCATCAATTTCATCAATAAATATAATACATGGTGCAGATTTTCTAGCATGTTCA 300033 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || | |||||||| | || || || | |||||| ||||||| ||||| |||||| | Sbjct 300032 AACATATCTCTTACTCTAGACGCCCCTACTCCAACAAACATTTCAACAAAATCAGAACCA 299973 Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209 || | | || |||| || |||||||| ||||||| || | || || | ||| ||| Sbjct 299972 GAAATTGTAAAAAATGGAACTTTTGCTTCACCTGCTATCGCTTTTGCAAGTAATGTTTTA 299913 Query 289210 CCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTA 289269 || |||||||| || || | | || | ||||| || | |||| || | | || Sbjct 299912 CCAGTTCCAGGAGGACCTACCATTAATATACCCTTAGG-AATTTTTCCTCCTAATTTTTG 299854 Query 289270 TATTTCTCAGGGCTC-TTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATC 289328 | | || || |||||| | ||||| | ||| || ||| | |||||| ||||| Sbjct 299853 AAAACGACTAGGTTCTTTTAAATACTCTACTAATTCACTAACTTCTTCTTTTGCTTCATC 299794 Query 289329 ACATCCTGCTACATCAGCAAAAGT 289352 ||||||||| ||||||| ||| || Sbjct 299793 ACATCCTGCAACATCAGAAAAGGT 299770 Score = 127 bits (140), Expect = 6e-24 Identities = 299/448 (67%), Gaps = 5/448 (1%) Strand=Plus/Plus Query 106903 TTTCATAGCAAAAGACGAACTCATACCATAGAAAAACTTGAACTTTTTACCATCTTCCTC 106962 |||||| ||| ||| |||||||||||||| || | | | || |||||| | ||| | Sbjct 494003 TTTCATTGCAGAAGTAGAACTCATACCATAAAATAGCATAAATTTTTTAGATTTTTCTTT 494062 Query 106963 AATTAACTTACCTGGATTTTCATCGTGTCCCGCAAAGACACCGCCAACCATTACGAAATC 107022 |||| | ||| | || | ||||| ||||| | ||| || | ||| || ||||| Sbjct 494063 GATTATTTCCCCTAAACACTCGGCATGTCCTGCAAAAATACCACCTAACATAACAAAATC 494122 Query 107023 AGCCCCGCCACCGAATGCTTTAGCCATATCACCAGGGCAAGTAATTCCACCATCACTAAT 107082 || || || || || ||||| || ||||| || | |||| |||||||||||||| Sbjct 494123 CGCACCCCCTCCAAAAGCTTTTGCAATATCTCCTGAAACAGTACAACCACCATCACTAAT 494182 Query 107083 AATATAA--GTTTTATCGA--TGCGAGATTCGCACGCCTCTAATACACAAGAGAGTTGGG 107138 || | | ||| ||| | |||| || |||| |||| | | || ||||| | Sbjct 494183 GATTTGACCATTTAATCCATGTGCGGCATCTGCAC-ATTCTATAATAGCTGACAGTTGAG 494241 Query 107139 GCATACCAATACCTGTTTGAATTCTTGTAGTGCAAGCACTTCCACCACCGATACCAACTT 107198 | ||| || ||||||| |||| ||||||||| || ||| || ||||| |||| Sbjct 494242 GATAACCTATTCCTGTTTTTATTCGTGTAGTGCATACAGAACCAGGTCCTATACCTACTT 494301 Query 107199 TAACAATATCCATACCACAATCAATTAAATCTTGAACTCCCTCTTTAGTAGCGACATTAC 107258 | || | ||| ||| | ||||| |||| ||| || |||| | ||||||| Sbjct 494302 TTACTACATCTGCTCCAGATAATATTAATTCTTCAACCATTTCACCAGTAACAACATTAC 494361 Query 107259 CAGCAATAATAATTTGGTCGGGGTATCGCTCTCTTACTTTTTTACAATATGTCTTGAAAT 107318 | ||| |||||||| || || | ||||||| |||||| || | | |||| Sbjct 494362 CTGCACAAATAATTTTATCTGGAAAAAAATCTCTTATTTTTTTTAAAAAAGAAACAAAAT 494421 Query 107319 TCTCAATATATCCATTAGCAATATCAAT 107346 |||| ||| ||||| || | |||||| Sbjct 494422 ACTCAGAATAGCCATTGGCTACATCAAT 494449 >seq4 Length=803365466 Score = 147 bits (162), Expect = 6e-30 Identities = 236/339 (70%), Gaps = 0/339 (0%) Strand=Plus/Plus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 |||| ||||| |||||| | ||| ||||| |||||| ||| | | | ||| Sbjct 802222941 TTTCGCACGGTACCATCATATTTCACCATGATGTCCTCCATAGCCTTCACGAGCCTCCGC 802223000 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 || ||||| || || ||| ||||| ||||| |||||||| | ||| | | ||||||| Sbjct 802223001 TGGATATATCCCGTCTCAGAAGTTTTCACAGCAGTATCAATCAAACCTTCTCTACCACCC 802223060 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 |||||||||||||| | || | |||| || || | || | | ||| |||| || || Sbjct 802223061 ATAGCATGGAAGAAAAATTCCTGCGGTGTCAGGCCTCGAAGATAAGAGTTCTCCACAAAT 802223120 Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAG 302778 ||||| ||||| | ||| || || ||||| |||| || | || || | Sbjct 802223121 CCACGGCTTTCGGGGCCGTAGTCATCTTTCGTGAAGTGGGGCAATGTACGGTCAACAAAA 802223180 Query 302779 CCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAA 302838 || |||| || ||||| || ||||||||||||||||| | || | | |||| || ||| Sbjct 802223181 CCAAATGGAATCCGCTTGCCCTCAACGTTCTGCTGTCCGACACAAGCAGTCATTTGTGAA 802223240 Query 302839 ATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877 ||||| | |||||| || ||||| ||| | |||||| Sbjct 802223241 ATATTAATGAAACTGCCTTTTGAGCCTGCAGTGACCATA 802223279 Score = 123 bits (136), Expect = 7e-23 Identities = 174/240 (73%), Gaps = 11/240 (5%) Strand=Plus/Plus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 |||||||||||||| ||||||||| ||||| | |||||| | || | | || || | Sbjct 493407055 ACCAACAGCATCAAGTTCGTCAATAAAAATGATTGACGGAGCAGCTTCTTTGGC--TTCC 493407112 Query 289089 --AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 |||||||| |||||||||| |||||| |||||| ||||||| |||||||| | Sbjct 493407113 TTGAATAATTCCCTTACACGGGCTGCTCCTCTTCCAACAAACATTTCGACAAATTCGCTA 493407172 Query 289147 GCGGATACTTGAATGAATG---TTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGT 289203 || || || | ||||| || || || || ||||| |||||| ||||||| | Sbjct 493407173 GCAGAAACAGAGAAGAATGGAATTCCA---GCCTCTCCTGCAACTGCCTTCGCCAGCAAA 493407229 Query 289204 GTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGC 289262 || || || |||||||| || || | | ||||| ||| | |||| | |||| |||||| Sbjct 493407230 GTTTTCCCGGTTCCAGGAGGGCCAGCAAGCAGAACACCCCTGGGTAATCTTGCTCCCAGC 493407289 >seq3 Length=775183943 Score = 147 bits (162), Expect = 6e-30 Identities = 236/339 (70%), Gaps = 0/339 (0%) Strand=Plus/Plus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 ||||| ||||| |||||| | ||| ||||| |||||| ||| | | | ||| Sbjct 773387443 TTTCTCACGGTACCATCATATTTCACCATGATGTCCTCCATAGCCTTCACGAGCCTCCGC 773387502 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 |||||||| || || ||| ||||| ||||| |||||||| | ||| | | ||||||| Sbjct 773387503 TGAATATATCCTGTCTCAGAAGTTTTCACAGCAGTATCAATCAAACCTTCTCTACCACCC 773387562 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 |||||||||||||| | || | ||| || || | || | ||| |||| || || Sbjct 773387563 ATAGCATGGAAGAAAAATTCCTGTGGTGTCAGGCCTCGAAGGTAAGAGTTCTCCACAAAT 773387622 Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAG 302778 ||||| ||||| | ||| || || ||||| |||| ||| | | || | Sbjct 773387623 CCACGGCTTTCGGGGCCGTAGTCATCTTTCGTGAAGTGGGGCAAGGTACGATCAACAAAA 773387682 Query 302779 CCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAA 302838 || |||| || ||||| || ||||||||||||||||| | || | | |||| || ||| Sbjct 773387683 CCAAATGGAATCCGCTTGCCCTCAACGTTCTGCTGTCCGACACAAGCAGTCATTTGTGAA 773387742 Query 302839 ATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877 ||||| | |||||| || ||||| ||| | |||||| Sbjct 773387743 ATATTAATGAAACTGCCTTTTGAGCCTGCAGTGACCATA 773387781 Score = 118 bits (130), Expect = 3e-21 Identities = 173/240 (72%), Gaps = 11/240 (5%) Strand=Plus/Plus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 |||||||||||||| ||||||||| ||||| | |||||| | || | | || || | Sbjct 559346223 ACCAACAGCATCAAGTTCGTCAATAAAAATGATTGACGGAGCAGCTTCTTTGGC--TTCC 559346280 Query 289089 --AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 |||||||| || || |||| |||||| |||||| ||||||| |||||||| | Sbjct 559346281 TTGAATAATTCCCTCACGCGGGCTGCTCCTCTTCCAACAAACATTTCAACAAATTCGCTA 559346340 Query 289147 GCGGATACTTGAATGAATG---TTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGT 289203 || || || | ||||| || || || || ||||| |||||| ||||||| | Sbjct 559346341 GCAGAAACAGAGAAGAATGGAATTCCA---GCCTCTCCTGCAACTGCCTTCGCCAGCAAA 559346397 Query 289204 GTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGC 289262 || || || |||||||| || || | | |||||| ||| | |||| | |||| |||||| Sbjct 559346398 GTTTTCCCGGTTCCAGGAGGGCCAGCAAGTAGAACACCCCTGGGTAATCTTGCTCCCAGC 559346457 >seq13 Length=727576108 Score = 141 bits (156), Expect = 3e-28 Identities = 219/313 (70%), Gaps = 0/313 (0%) Strand=Plus/Plus Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624 ||||||||| |||||| ||| | | | ||||||||||| || || || ||||| Sbjct 418518249 CATAATGTCCTCCATAGCCTTCACGAGCCTCCGCTGAATATATCCCGTCTCGGAGGTTTT 418518308 Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684 ||||| |||||||| | ||| | | ||||||||||||||||||||| | |||| || Sbjct 418518309 CACAGCAGTATCAATCAAACCTTCTCTACCACCCATAGCATGGAAGAAAAATTCTTGTGG 418518368 Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744 | || || | || | ||| ||||||| || ||||| || || | ||| Sbjct 418518369 TGTCAGACCTCGAAGGTAAGAGTTCTCAACAAACCCACGACTTTCTGGGCCGTAGTCATC 418518428 Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804 || || ||||| |||| || | | || | || |||| || ||||| || ||||| Sbjct 418518429 TTTCGTGAAGTGGGGCAATGTACGATCAACAAAACCAAATGGAATCCGCTTGCCCTCAAC 418518488 Query 302805 GTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 ||||||||||| | || | | |||| ||||||||||| | |||||| || ||||| Sbjct 418518489 ATTCTGCTGTCCGACACAAGCAGTCATTTGCGAAATATTAATGAAACTGCCTTTTGAGCC 418518548 Query 302865 AGCATTTACCATA 302877 ||| | |||||| Sbjct 418518549 TGCAGTGACCATA 418518561 Score = 105 bits (116), Expect = 2e-17 Identities = 155/219 (71%), Gaps = 3/219 (1%) Strand=Plus/Plus Query 156050 ACCATTCCTCTTGCC---ACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAG 156106 ||| || |||||||| ||| ||||||||||| |||||||| | ||||||||||| || Sbjct 79584449 ACCCTTTCTCTTGCCTCCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAA 79584508 Query 156107 CATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCG 156166 |||||||| ||| |||||||| || ||||| ||||| || || | |||| | || Sbjct 79584509 CATAGGAACAATTCCATTGGATGTTCCATTTGTTCCTCGGATGTAACTCCCAGTAGCACG 79584568 Query 156167 AACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTT 156226 || || |||| | | ||||| || || | |||| || ||| |||||||| Sbjct 79584569 AATGTTGTGAACAGAGACGCCAATCCCTCCAGCAGATTTGCTGATGACAGCACATTCCTT 79584628 Query 156227 TACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 | ||||| | || || || || |||||||| ||| Sbjct 79584629 CAGAGTATCATAGATTCCCTCGATGCTATCATCTTTCAT 79584667 Score = 89.7 bits (98), Expect = 2e-12 Identities = 174/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 ||| | ||||| | |||||| | ||| | | || | |||||||||||||||| | ||| Sbjct 133022255 GTTCTCACAGCAGCATCAATCAAACCTTCTCTACTAACCATAGCATGGAAGAAAAACTCC 133022196 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739 | ||| || || | || | || ||| ||| || ||||| || || || | Sbjct 133022195 TGTGGTGTCAGACCTCGAAGGTACGAATTCTGAACAAACCCACGACTTTCAGGGCCATAG 133022136 Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799 || || ||||| || || | || | | || | || | || || ||||| || Sbjct 133022135 TCATCTTTCGTAAATTGGGGTAATGTACGATCAACAAAACCAAACGGAATCCGCTTGCCC 133022076 Query 302800 TCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTG 302859 |||| ||||||||||| || || | |||||| ||||||||||| | |||||| || Sbjct 133022075 TCAATTTTCTGCTGTCCAAGACAAGCAATCATTTGCGAAATATTAATGAAACTGCCTTTT 133022016 Query 302860 GAGCCAGCATTTACCAT 302876 ||||| ||| | ||||| Sbjct 133022015 GAGCCTGCAGTGACCAT 133021999 >seq10 Length=712180895 Score = 141 bits (156), Expect = 3e-28 Identities = 237/340 (70%), Gaps = 2/340 (1%) Strand=Plus/Minus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 || || ||||| |||||| | ||| ||||| ||||| ||| | | | ||| Sbjct 666083603 TTCCTCACGGTACCATCATATTTCACCATGATGTCCTCCATGGCCTTCACGAGCCTCCGC 666083544 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 |||||||| ||||| ||| ||||||||||| ||||| || | ||| | | ||||||| Sbjct 666083543 TGAATATATCCAGTCTCAGAAGTTTTTACAGCAGTATCGATCAAACCTTCTCTACCACCC 666083484 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 |||||||||||||| | || || ||| || || | || | ||| ||| ||||| Sbjct 666083483 ATAGCATGGAAGAAGAATTCCTCTGGTGTCAGGCCTCGAAGGTAAGAGTTCTGCACGAAT 666083424 Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTG-GTAAAGTGTGGCAGGGTCCTGTTCTCATA 302777 ||||| ||||| | ||| | ||| | ||||| |||| || | || | Sbjct 666083423 CCACGGCTTTCGGGACCGTTGTC-ATTTTGCGAGAAGTGGGGCAATGTACGACCAGCAAA 666083365 Query 302778 GCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGA 302837 || ||||||| | ||| || ||||| ||||||||||| | ||| | | |||||||||| Sbjct 666083364 TCCAAATGGGATCCTCTTGCCCTCAACATTCTGCTGTCCGACGCAAGCAGTCATCTGCGA 666083305 Query 302838 AATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877 |||||| | |||||| || ||||| ||| | |||||| Sbjct 666083304 AATATTAATGAAACTGCCTTTTGAGCCTGCAGTAACCATA 666083265 Score = 123 bits (136), Expect = 7e-23 Identities = 233/340 (69%), Gaps = 2/340 (1%) Strand=Plus/Plus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 ||||| ||||| ||| || | ||| ||||| ||||| ||| | | | ||| Sbjct 665864013 TTTCTCACGGTACCATCGTATTTCACCATGATGTCCTCCATGGCCTTCACGAGCCTCCGC 665864072 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 |||||||| ||||| || ||||| ||||| |||||||| | ||| | | ||||||| Sbjct 665864073 TGAATATATCCAGTCTCGGAAGTTTTCACAGCAGTATCAATCAAACCTTCTCTACCACCC 665864132 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 |||||||||||||| | || || ||| || || | || | ||| | | ||||| Sbjct 665864133 ATAGCATGGAAGAAGAATTCCTCTGGTGTCAGGCCTCGAAGGTAAGAGTTTTTCACGAAC 665864192 Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTG-GTAAAGTGTGGCAGGGTCCTGTTCTCATA 302777 ||||| || || ||||| | ||| || ||||| |||| || | || | Sbjct 665864193 CCACGGCTTTCAGGACTGTCGTC-ATTTTGCGTGAAGTGGGGCAATGTACGACCAGCAAA 665864251 Query 302778 GCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGA 302837 || ||||||| | ||| || ||||| ||||||||||| | || | |||| ||||| Sbjct 665864252 ACCAAATGGGATCCTCTTGCCTTCAACATTCTGCTGTCCGACACAAGCGGTCATTTGCGA 665864311 Query 302838 AATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877 |||||| | |||||| || ||||| ||| | |||||| Sbjct 665864312 AATATTAATGAAACTGCCTTTTGAGCCTGCAGTGACCATA 665864351 Score = 96.9 bits (106), Expect = 1e-14 Identities = 208/305 (68%), Gaps = 16/305 (5%) Strand=Plus/Minus Query 251403 GGCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAG 251462 ||| || || |||||||| | ||| ||||| || ||||||||||| |||| ||| Sbjct 560192901 GGCAATGAGTCCACACTTCTCACAAACATGCACTCTGTAAGCATCGCTCTGGTCAAATAA 560192842 Query 251463 CCGACCCTTGGTGAAGCGAGATGCA---CCGTGTGAAATCATACAATCACGCTCCATTTC 251519 || |||| ||| | ||||| || || | |||||| ||||| | ||||||||| Sbjct 560192841 CCTTTCCTTCAAGAA---AAATGCAGCTCCATGAGCAATCATGCAATCCCTCTCCATTTC 560192785 Query 251520 ACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAAC 251579 || ||||| ||||||||||| || | | ||||| || ||||| | || || | Sbjct 560192784 TCCAAAACGGAGACCACCATCACGTGAGCGCCCCTCTGCTGGCTGTCTGGTCAGTATCTG 560192725 Query 251580 CATAGGAC--CGA--TGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCT 251635 | ||||| ||| | || | || ||| |||| ||||||||||| || | || Sbjct 560192724 GACAGGACCACGACCTCTAGAGTGAATTTTG----TCATCCACCATATGCTTAAGTCTCT 560192669 Query 251636 GGTAGAATGCGGGACCGATGAAGATGCTCGAAGGC-ATTTGCTCTCCAGTTAGAGCGTTA 251694 ||||| | | ||||| | ||| || | | || | |||| ||| ||||| || | || Sbjct 560192668 GGTAGTAAGTTGGACCTAAGAAAATCATTGCAGTCAATTTTCTC-CCAGTATGACCATTG 560192610 Query 251695 TACAT 251699 ||||| Sbjct 560192609 TACAT 560192605 >seq9 Length=700855599 Score = 141 bits (156), Expect = 3e-28 Identities = 239/341 (70%), Gaps = 4/341 (1%) Strand=Plus/Plus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 ||||| ||||| |||||| | ||| ||||| ||||| ||| | | | ||| Sbjct 649091303 TTTCTCACGGTACCATCATATTTCACCATGATGTCCTCCATGGCCTTCACAAGCCTCCGC 649091362 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 |||||||| ||||| ||| ||||||||||| ||||| || | ||| | | ||||||| Sbjct 649091363 TGAATATATCCAGTCTCAGAAGTTTTTACAGCAGTATCGATCAAACCTTCTCTACCACCC 649091422 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 |||||||||||||| | || || ||| || || || | ||| |||| || || Sbjct 649091423 ATAGCATGGAAGAAGAATTCCTCTGGTGTCAGGCCTTGAAGGTAAGAGTTCTCCACAAAT 649091482 Query 302719 CCACGCGCCT-CGGGCGAATCGTCGAACTTG-GTAAAGTGTGGCAGGGTCCTGTTCTCAT 302776 ||||| || | |||| | ||| | ||| | ||||| |||| || | || Sbjct 649091483 CCACG-GCTTCCGGGACCGTTGTC-ATTTTGCGAGAAGTGGGGCAATGTACGACCAGCAA 649091540 Query 302777 AGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCG 302836 | || ||||||| | ||| || ||||| ||||||||||| | ||| | | ||||||||| Sbjct 649091541 ATCCAAATGGGATCCTCTTGCCCTCAACATTCTGCTGTCCGACGCAAGCAGTCATCTGCG 649091600 Query 302837 AAATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877 ||||||| | |||||| || ||||| ||| | |||||| Sbjct 649091601 AAATATTAATGAAACTGCCTTTTGAGCCTGCAGTAACCATA 649091641 Score = 141 bits (156), Expect = 3e-28 Identities = 237/340 (70%), Gaps = 2/340 (1%) Strand=Plus/Minus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 || || ||||| |||||| | ||| ||||| ||||| ||| | | | ||| Sbjct 649317406 TTCCTCACGGTACCATCATATTTCACCATGATGTCCTCCATGGCCTTCACGAGCCTCCGC 649317347 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 |||||||| ||||| ||| ||||||||||| ||||| || | ||| | | ||||||| Sbjct 649317346 TGAATATATCCAGTCTCAGAAGTTTTTACAGCAGTATCGATCAAACCTTCTCTACCACCC 649317287 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 |||||||||||||| | || || ||| || || | || | ||| ||| ||||| Sbjct 649317286 ATAGCATGGAAGAAGAATTCCTCTGGTGTCAGGCCTCGAAGGTAAGAGTTCTGCACGAAT 649317227 Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTG-GTAAAGTGTGGCAGGGTCCTGTTCTCATA 302777 ||||| ||||| | ||| | ||| | ||||| |||| || | || | Sbjct 649317226 CCACGGCTTTCGGGACCGTTGTC-ATTTTGCGAGAAGTGGGGCAATGTACGACCAGCAAA 649317168 Query 302778 GCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGA 302837 || ||||||| | ||| || ||||| ||||||||||| | ||| | | |||||||||| Sbjct 649317167 TCCAAATGGGATCCTCTTGCCCTCAACATTCTGCTGTCCGACGCAAGCAGTCATCTGCGA 649317108 Query 302838 AATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877 |||||| | |||||| || ||||| ||| | |||||| Sbjct 649317107 AATATTAATGAAACTGCCTTTTGAGCCTGCAGTAACCATA 649317068 Score = 96.9 bits (106), Expect = 1e-14 Identities = 208/305 (68%), Gaps = 16/305 (5%) Strand=Plus/Minus Query 251403 GGCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAG 251462 ||| || || |||||||| | ||| ||||| || ||||||||||| |||| ||| Sbjct 568010870 GGCAATGAGTCCACACTTCTCACAAACATGCACTCTGTAAGCATCGCTCTGGTCAAATAA 568010811 Query 251463 CCGACCCTTGGTGAAGCGAGATGCA---CCGTGTGAAATCATACAATCACGCTCCATTTC 251519 || |||| ||| | ||||| || || | |||||| ||||| | ||||||||| Sbjct 568010810 CCTTTCCTTCAAGAA---AAATGCAGCTCCATGAGCAATCATGCAATCCCTCTCCATTTC 568010754 Query 251520 ACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAAC 251579 || ||||| ||||||||||| || | | ||||| || ||||| | || || | Sbjct 568010753 TCCAAAACGGAGACCACCATCACGTGAGCGCCCCTCTGCTGGCTGTCTGGTCAGTATCTG 568010694 Query 251580 CATAGGAC--CGA--TGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCT 251635 | ||||| ||| | || | || ||| |||| ||||||||||| || | || Sbjct 568010693 GACAGGACCACGACCTCTAGAGTGAATTTTG----TCATCCACCATATGCTTAAGTCTCT 568010638 Query 251636 GGTAGAATGCGGGACCGATGAAGATGCTCGAAGGC-ATTTGCTCTCCAGTTAGAGCGTTA 251694 ||||| | | ||||| | ||| || | | || | |||| ||| ||||| || | || Sbjct 568010637 GGTAGTAAGTTGGACCTAAGAAAATCATTGCAGTCAATTTTCTC-CCAGTATGACCATTG 568010579 Query 251695 TACAT 251699 ||||| Sbjct 568010578 TACAT 568010574 >seq14 Length=755408349 Score = 140 bits (154), Expect = 1e-27 Identities = 222/315 (70%), Gaps = 4/315 (1%) Strand=Plus/Plus Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624 ||||||||| |||||| ||| | | | ||||||||||| || || ||| ||||| Sbjct 376695947 CATAATGTCCTCCATAGCCTTCACGAGCCTCCGCTGAATATATCCCGTCTCAGAGGTTTT 376696006 Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684 ||||| |||||||| | ||| | | ||||||||||||||||||||| | |||| || Sbjct 376696007 CACAGCAGTATCAATCAAACCTTCTCTACCACCCATAGCATGGAAGAAAAATTCTTGTGG 376696066 Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCC--TCGGGCGAATCGTCG 302742 | || || | || | ||| ||||||| ||||| |||| | || || | ||| Sbjct 376696067 TGTCAGACCTCGAAGGTAAGAGTTCTCAAC-AAACC-CGCGACTTTCAGGGCCGTAGTCA 376696124 Query 302743 AACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCA 302802 || || ||||| |||| || | | | | || |||| || ||||| || ||| Sbjct 376696125 TCTTTCGTGAAGTGGGGCAATGTACGATCAACGAAACCAAATGGAATCCGCTTGCCCTCA 376696184 Query 302803 ACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAG 302862 || ||||||||||| | || | | |||| ||||||||||| | |||||| || ||| Sbjct 376696185 ACATTCTGCTGTCCGACACAAGCAGTCATTTGCGAAATATTAATGAAACTGCCTTTTGAG 376696244 Query 302863 CCAGCATTTACCATA 302877 || ||| | |||||| Sbjct 376696245 CCTGCAGTGACCATA 376696259 Score = 118 bits (130), Expect = 3e-21 Identities = 158/219 (72%), Gaps = 3/219 (1%) Strand=Plus/Plus Query 156050 ACCATTCCTCTTGCC---ACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAG 156106 ||| || |||||||| ||| ||||||||||| |||||||| | ||||||||||| || Sbjct 35287573 ACCCTTTCTCTTGCCTCCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAA 35287632 Query 156107 CATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCG 156166 |||||||| ||| |||||||| || ||||| ||||| ||||||| ||| | || Sbjct 35287633 CATAGGAACAATCCCATTGGATGTTCCATTTGTTCCTCGAATATAGCTCCCAATAGCACG 35287692 Query 156167 AACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTT 156226 || ||| |||| | | ||||| || || | ||||| || ||| |||||||| Sbjct 35287693 AATATTGTGAACAGAAACACCAATTCCTCCAGCAGATTTACTTATGACAGCACATTCCTT 35287752 Query 156227 TACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 | ||||| | || || ||||| ||||||| ||| Sbjct 35287753 CAGAGTATCATAGATTCCCTCAATGCTGTCATCTTTCAT 35287791 >seq11 Length=621432051 Score = 102 bits (112), Expect = 2e-16 Identities = 155/220 (70%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 156049 TACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 |||| ||||||||| || || ||||| ||||| || ||||| | |||||| |||| || Sbjct 597005693 TACCTTTCCTCTTGCCTCCGCCTTGATCAACATAGCGTGCAGTGTCATTGAAAACACGTA 597005752 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165 |||| || | ||| ||||| ||||| ||||| ||||| ||||| | |||| | | Sbjct 597005753 GCATGGGTACAATTCCATTAGAAGTTCCATTAGTTCCACGAATGTAACTGCCAGTAGCCC 597005812 Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225 |||| || ||||| | ||||| || || | |||| || |||||||||| Sbjct 597005813 GAACGTTGTGAATTGAGACACCAATCCCTCCAGCAGATTTGCTTATGGAAGCGCATTCCG 597005872 Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 | ||||| |||| || ||||| |||||||| ||| Sbjct 597005873 AGAGAGTATCATAAATTCCCTCAATGCTATCATCTTTCAT 597005912 >seq5 Length=754274518 Score = 98.7 bits (108), Expect = 3e-15 Identities = 215/317 (68%), Gaps = 4/317 (1%) Strand=Plus/Plus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||||| ||||||||||| ||||| || | | || || | | || | || | Sbjct 604884045 ACCAATTGCATCAATTTCATCAATAAATACAATACTAGGTGCACATTCCCGAGCTTCTTG 604884104 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 |||||| |||| || | ||||| ||||| ||||||| ||||||| | || || ||| | Sbjct 604884105 AAATAAGCCTCTCACCCTGGATGGTCCAACACCAACAAACATTTCCAAGAAGTCTGAACC 604884164 Query 289149 GGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 |||| | || | ||| | |||| | || || || || | || || || |||| Sbjct 604884165 AGATA-TAGACAAGAACGGTACACCAGACTCTCCAGCAGTAGCTTTAGCAAGGAGAGTCT 604884223 Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCAGAC 289266 | ||||| ||||| ||||| | ||| | ||||| |||| ||| || ||||| | Sbjct 604884224 TTCCTGTGCCAGGGGGTCCACAAAGAAGAGCACCCTTCGGTATTTTAGCTCCCAG-TGCT 604884282 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326 | |||||| ||||| | || | || | |||| |||| | ||| | ||| || ||| Sbjct 604884283 TCATATTTGTCAGGATTTTTCAGGAAATGAACAAATTCCATGATTTCTTGTTTAGCTTCA 604884342 Query 289327 TCACATCCTGCTACATC 289343 ||||| || |||||||| Sbjct 604884343 TCACAACCAGCTACATC 604884359 >seq55813 Length=437 Score = 96.9 bits (106), Expect = 1e-14 Identities = 208/305 (68%), Gaps = 16/305 (5%) Strand=Plus/Plus Query 251403 GGCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAG 251462 ||| || || |||||||| | ||| ||||| || ||||||||||| |||| ||| Sbjct 54 GGCAATGAGTCCACACTTCTCACAAACATGCACTCTGTAAGCATCGCTCTGGTCAAATAA 113 Query 251463 CCGACCCTTGGTGAAGCGAGATGCA---CCGTGTGAAATCATACAATCACGCTCCATTTC 251519 || |||| ||| | ||||| || || | |||||| ||||| | ||||||||| Sbjct 114 CCTTTCCTTCAAGAA---AAATGCAGCTCCATGAGCAATCATGCAATCCCTCTCCATTTC 170 Query 251520 ACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAAC 251579 || ||||| ||||||||||| || | | ||||| || ||||| | || || | Sbjct 171 TCCAAAACGGAGACCACCATCACGTGAGCGCCCCTCTGCTGGCTGTCTGGTCAGTATCTG 230 Query 251580 CATAGGAC--CGA--TGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCT 251635 | ||||| ||| | || | || ||| |||| ||||||||||| || | || Sbjct 231 GACAGGACCACGACCTCTAGAGTGAATTTTG----TCATCCACCATATGCTTAAGTCTCT 286 Query 251636 GGTAGAATGCGGGACCGATGAAGATGCTCGAAGGC-ATTTGCTCTCCAGTTAGAGCGTTA 251694 ||||| | | ||||| | ||| || | | || | |||| ||| ||||| || | || Sbjct 287 GGTAGTAAGTTGGACCTAAGAAAATCATTGCAGTCAATTTTCTC-CCAGTATGACCATTG 345 Query 251695 TACAT 251699 ||||| Sbjct 346 TACAT 350 >seq6 Length=841096276 Score = 84.2 bits (92), Expect = 6e-11 Identities = 212/317 (67%), Gaps = 4/317 (1%) Strand=Plus/Plus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||||| ||||||||||| ||||| || | | || || | | || | || | Sbjct 629695007 ACCAATTGCATCAATTTCATCAATAAATACAATACTGGGTGCACATTCCCGAGCTTCTTG 629695066 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 |||||| ||| || | ||||| ||||| ||||||| ||||||| | || || ||| | Sbjct 629695067 AAATAAGCTTCTCACCCTGGATGGTCCAACACCAACAAACATTTCCAAGAAGTCTGAACC 629695126 Query 289149 GGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 || | | || | ||| | |||| | || || || || | || || || |||| Sbjct 629695127 AGA-AATAGACAAGAAAGGTACACCAGACTCTCCAGCAGTAGCTTTAGCAAGGAGAGTCT 629695185 Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCAGAC 289266 | ||||| ||||| || || | ||| | ||||| |||| ||| || ||||| | Sbjct 629695186 TTCCTGTGCCAGGGGGGCCACAAAGAAGAGCACCCTTCGGTATTTTAGCTCCCAG-TGCT 629695244 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326 | |||||| ||||| | || | || | |||| |||| | ||| | ||| || ||| Sbjct 629695245 TCATATTTGTCAGGATTTTTCAGGAAATGAACAAATTCCATGATTTCTTGTTTAGCTTCA 629695304 Query 289327 TCACATCCTGCTACATC 289343 ||||| || |||||||| Sbjct 629695305 TCACAACCAGCTACATC 629695321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1469005281286158