Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 167 7e-36
seq4 147 6e-30
seq3 147 6e-30
seq13 141 3e-28
seq10 141 3e-28
seq9 141 3e-28
seq14 140 1e-27
seq11 102 2e-16
seq5 98.7 3e-15
seq55813 96.9 1e-14
seq6 84.2 6e-11
>seq129631
Length=630463
Score = 167 bits (184), Expect = 7e-36
Identities = 343/504 (68%), Gaps = 12/504 (2%)
Strand=Plus/Minus
Query 288852 ATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGC 288911
|||||| | ||||| |||| ||| || || ||||| | || | || || || || ||
Sbjct 300264 ATCAAAACGACCAGGACGAAGTAAAGCAGGATCTAAAACGTCTGGCCTATTAGTAGCAGC 300205
Query 288912 CAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAA--ATTTGATTA 288969
| || || || | ||| | |||||||||||||| || || ||||||||
Sbjct 300204 TATTAAAATAACACCTTCATTACCATTAAATCCATCCAT--TTCCACAAGCATTTGATTT 300147
Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029
| ||||||||| |||||||||| ||| | | |||| | | | |||| |
Sbjct 300146 AATGTTTGTTCTCTTTCATCATGGCCACCACCT-AATCC-----AGCACCTCTTTGACGA 300093
Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089
||||| ||||||||||| ||||| || || | ||| || | | || ||| ||| | ||
Sbjct 300092 CCAACTGCATCAATTTCATCAATAAATATAATACATGGTGCAGATTTTCTAGCATGTTCA 300033
Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149
|| | |||||||| | || || || | |||||| ||||||| ||||| |||||| |
Sbjct 300032 AACATATCTCTTACTCTAGACGCCCCTACTCCAACAAACATTTCAACAAAATCAGAACCA 299973
Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209
|| | | || |||| || |||||||| ||||||| || | || || | ||| |||
Sbjct 299972 GAAATTGTAAAAAATGGAACTTTTGCTTCACCTGCTATCGCTTTTGCAAGTAATGTTTTA 299913
Query 289210 CCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTA 289269
|| |||||||| || || | | || | ||||| || | |||| || | | ||
Sbjct 299912 CCAGTTCCAGGAGGACCTACCATTAATATACCCTTAGG-AATTTTTCCTCCTAATTTTTG 299854
Query 289270 TATTTCTCAGGGCTC-TTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATC 289328
| | || || |||||| | ||||| | ||| || ||| | |||||| |||||
Sbjct 299853 AAAACGACTAGGTTCTTTTAAATACTCTACTAATTCACTAACTTCTTCTTTTGCTTCATC 299794
Query 289329 ACATCCTGCTACATCAGCAAAAGT 289352
||||||||| ||||||| ||| ||
Sbjct 299793 ACATCCTGCAACATCAGAAAAGGT 299770
Score = 127 bits (140), Expect = 6e-24
Identities = 299/448 (67%), Gaps = 5/448 (1%)
Strand=Plus/Plus
Query 106903 TTTCATAGCAAAAGACGAACTCATACCATAGAAAAACTTGAACTTTTTACCATCTTCCTC 106962
|||||| ||| ||| |||||||||||||| || | | | || |||||| | ||| |
Sbjct 494003 TTTCATTGCAGAAGTAGAACTCATACCATAAAATAGCATAAATTTTTTAGATTTTTCTTT 494062
Query 106963 AATTAACTTACCTGGATTTTCATCGTGTCCCGCAAAGACACCGCCAACCATTACGAAATC 107022
|||| | ||| | || | ||||| ||||| | ||| || | ||| || |||||
Sbjct 494063 GATTATTTCCCCTAAACACTCGGCATGTCCTGCAAAAATACCACCTAACATAACAAAATC 494122
Query 107023 AGCCCCGCCACCGAATGCTTTAGCCATATCACCAGGGCAAGTAATTCCACCATCACTAAT 107082
|| || || || || ||||| || ||||| || | |||| ||||||||||||||
Sbjct 494123 CGCACCCCCTCCAAAAGCTTTTGCAATATCTCCTGAAACAGTACAACCACCATCACTAAT 494182
Query 107083 AATATAA--GTTTTATCGA--TGCGAGATTCGCACGCCTCTAATACACAAGAGAGTTGGG 107138
|| | | ||| ||| | |||| || |||| |||| | | || ||||| |
Sbjct 494183 GATTTGACCATTTAATCCATGTGCGGCATCTGCAC-ATTCTATAATAGCTGACAGTTGAG 494241
Query 107139 GCATACCAATACCTGTTTGAATTCTTGTAGTGCAAGCACTTCCACCACCGATACCAACTT 107198
| ||| || ||||||| |||| ||||||||| || ||| || ||||| ||||
Sbjct 494242 GATAACCTATTCCTGTTTTTATTCGTGTAGTGCATACAGAACCAGGTCCTATACCTACTT 494301
Query 107199 TAACAATATCCATACCACAATCAATTAAATCTTGAACTCCCTCTTTAGTAGCGACATTAC 107258
| || | ||| ||| | ||||| |||| ||| || |||| | |||||||
Sbjct 494302 TTACTACATCTGCTCCAGATAATATTAATTCTTCAACCATTTCACCAGTAACAACATTAC 494361
Query 107259 CAGCAATAATAATTTGGTCGGGGTATCGCTCTCTTACTTTTTTACAATATGTCTTGAAAT 107318
| ||| |||||||| || || | ||||||| |||||| || | | ||||
Sbjct 494362 CTGCACAAATAATTTTATCTGGAAAAAAATCTCTTATTTTTTTTAAAAAAGAAACAAAAT 494421
Query 107319 TCTCAATATATCCATTAGCAATATCAAT 107346
|||| ||| ||||| || | ||||||
Sbjct 494422 ACTCAGAATAGCCATTGGCTACATCAAT 494449
>seq4
Length=803365466
Score = 147 bits (162), Expect = 6e-30
Identities = 236/339 (70%), Gaps = 0/339 (0%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
|||| ||||| |||||| | ||| ||||| |||||| ||| | | | |||
Sbjct 802222941 TTTCGCACGGTACCATCATATTTCACCATGATGTCCTCCATAGCCTTCACGAGCCTCCGC 802223000
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
|| ||||| || || ||| ||||| ||||| |||||||| | ||| | | |||||||
Sbjct 802223001 TGGATATATCCCGTCTCAGAAGTTTTCACAGCAGTATCAATCAAACCTTCTCTACCACCC 802223060
Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718
|||||||||||||| | || | |||| || || | || | | ||| |||| || ||
Sbjct 802223061 ATAGCATGGAAGAAAAATTCCTGCGGTGTCAGGCCTCGAAGATAAGAGTTCTCCACAAAT 802223120
Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAG 302778
||||| ||||| | ||| || || ||||| |||| || | || || |
Sbjct 802223121 CCACGGCTTTCGGGGCCGTAGTCATCTTTCGTGAAGTGGGGCAATGTACGGTCAACAAAA 802223180
Query 302779 CCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAA 302838
|| |||| || ||||| || ||||||||||||||||| | || | | |||| || |||
Sbjct 802223181 CCAAATGGAATCCGCTTGCCCTCAACGTTCTGCTGTCCGACACAAGCAGTCATTTGTGAA 802223240
Query 302839 ATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877
||||| | |||||| || ||||| ||| | ||||||
Sbjct 802223241 ATATTAATGAAACTGCCTTTTGAGCCTGCAGTGACCATA 802223279
Score = 123 bits (136), Expect = 7e-23
Identities = 174/240 (73%), Gaps = 11/240 (5%)
Strand=Plus/Plus
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
|||||||||||||| ||||||||| ||||| | |||||| | || | | || || |
Sbjct 493407055 ACCAACAGCATCAAGTTCGTCAATAAAAATGATTGACGGAGCAGCTTCTTTGGC--TTCC 493407112
Query 289089 --AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146
|||||||| |||||||||| |||||| |||||| ||||||| |||||||| |
Sbjct 493407113 TTGAATAATTCCCTTACACGGGCTGCTCCTCTTCCAACAAACATTTCGACAAATTCGCTA 493407172
Query 289147 GCGGATACTTGAATGAATG---TTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGT 289203
|| || || | ||||| || || || || ||||| |||||| ||||||| |
Sbjct 493407173 GCAGAAACAGAGAAGAATGGAATTCCA---GCCTCTCCTGCAACTGCCTTCGCCAGCAAA 493407229
Query 289204 GTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGC 289262
|| || || |||||||| || || | | ||||| ||| | |||| | |||| ||||||
Sbjct 493407230 GTTTTCCCGGTTCCAGGAGGGCCAGCAAGCAGAACACCCCTGGGTAATCTTGCTCCCAGC 493407289
>seq3
Length=775183943
Score = 147 bits (162), Expect = 6e-30
Identities = 236/339 (70%), Gaps = 0/339 (0%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
||||| ||||| |||||| | ||| ||||| |||||| ||| | | | |||
Sbjct 773387443 TTTCTCACGGTACCATCATATTTCACCATGATGTCCTCCATAGCCTTCACGAGCCTCCGC 773387502
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
|||||||| || || ||| ||||| ||||| |||||||| | ||| | | |||||||
Sbjct 773387503 TGAATATATCCTGTCTCAGAAGTTTTCACAGCAGTATCAATCAAACCTTCTCTACCACCC 773387562
Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718
|||||||||||||| | || | ||| || || | || | ||| |||| || ||
Sbjct 773387563 ATAGCATGGAAGAAAAATTCCTGTGGTGTCAGGCCTCGAAGGTAAGAGTTCTCCACAAAT 773387622
Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAG 302778
||||| ||||| | ||| || || ||||| |||| ||| | | || |
Sbjct 773387623 CCACGGCTTTCGGGGCCGTAGTCATCTTTCGTGAAGTGGGGCAAGGTACGATCAACAAAA 773387682
Query 302779 CCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAA 302838
|| |||| || ||||| || ||||||||||||||||| | || | | |||| || |||
Sbjct 773387683 CCAAATGGAATCCGCTTGCCCTCAACGTTCTGCTGTCCGACACAAGCAGTCATTTGTGAA 773387742
Query 302839 ATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877
||||| | |||||| || ||||| ||| | ||||||
Sbjct 773387743 ATATTAATGAAACTGCCTTTTGAGCCTGCAGTGACCATA 773387781
Score = 118 bits (130), Expect = 3e-21
Identities = 173/240 (72%), Gaps = 11/240 (5%)
Strand=Plus/Plus
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
|||||||||||||| ||||||||| ||||| | |||||| | || | | || || |
Sbjct 559346223 ACCAACAGCATCAAGTTCGTCAATAAAAATGATTGACGGAGCAGCTTCTTTGGC--TTCC 559346280
Query 289089 --AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146
|||||||| || || |||| |||||| |||||| ||||||| |||||||| |
Sbjct 559346281 TTGAATAATTCCCTCACGCGGGCTGCTCCTCTTCCAACAAACATTTCAACAAATTCGCTA 559346340
Query 289147 GCGGATACTTGAATGAATG---TTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGT 289203
|| || || | ||||| || || || || ||||| |||||| ||||||| |
Sbjct 559346341 GCAGAAACAGAGAAGAATGGAATTCCA---GCCTCTCCTGCAACTGCCTTCGCCAGCAAA 559346397
Query 289204 GTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGC 289262
|| || || |||||||| || || | | |||||| ||| | |||| | |||| ||||||
Sbjct 559346398 GTTTTCCCGGTTCCAGGAGGGCCAGCAAGTAGAACACCCCTGGGTAATCTTGCTCCCAGC 559346457
>seq13
Length=727576108
Score = 141 bits (156), Expect = 3e-28
Identities = 219/313 (70%), Gaps = 0/313 (0%)
Strand=Plus/Plus
Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624
||||||||| |||||| ||| | | | ||||||||||| || || || |||||
Sbjct 418518249 CATAATGTCCTCCATAGCCTTCACGAGCCTCCGCTGAATATATCCCGTCTCGGAGGTTTT 418518308
Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684
||||| |||||||| | ||| | | ||||||||||||||||||||| | |||| ||
Sbjct 418518309 CACAGCAGTATCAATCAAACCTTCTCTACCACCCATAGCATGGAAGAAAAATTCTTGTGG 418518368
Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744
| || || | || | ||| ||||||| || ||||| || || | |||
Sbjct 418518369 TGTCAGACCTCGAAGGTAAGAGTTCTCAACAAACCCACGACTTTCTGGGCCGTAGTCATC 418518428
Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804
|| || ||||| |||| || | | || | || |||| || ||||| || |||||
Sbjct 418518429 TTTCGTGAAGTGGGGCAATGTACGATCAACAAAACCAAATGGAATCCGCTTGCCCTCAAC 418518488
Query 302805 GTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864
||||||||||| | || | | |||| ||||||||||| | |||||| || |||||
Sbjct 418518489 ATTCTGCTGTCCGACACAAGCAGTCATTTGCGAAATATTAATGAAACTGCCTTTTGAGCC 418518548
Query 302865 AGCATTTACCATA 302877
||| | ||||||
Sbjct 418518549 TGCAGTGACCATA 418518561
Score = 105 bits (116), Expect = 2e-17
Identities = 155/219 (71%), Gaps = 3/219 (1%)
Strand=Plus/Plus
Query 156050 ACCATTCCTCTTGCC---ACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAG 156106
||| || |||||||| ||| ||||||||||| |||||||| | ||||||||||| ||
Sbjct 79584449 ACCCTTTCTCTTGCCTCCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAA 79584508
Query 156107 CATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCG 156166
|||||||| ||| |||||||| || ||||| ||||| || || | |||| | ||
Sbjct 79584509 CATAGGAACAATTCCATTGGATGTTCCATTTGTTCCTCGGATGTAACTCCCAGTAGCACG 79584568
Query 156167 AACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTT 156226
|| || |||| | | ||||| || || | |||| || ||| ||||||||
Sbjct 79584569 AATGTTGTGAACAGAGACGCCAATCCCTCCAGCAGATTTGCTGATGACAGCACATTCCTT 79584628
Query 156227 TACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265
| ||||| | || || || || |||||||| |||
Sbjct 79584629 CAGAGTATCATAGATTCCCTCGATGCTATCATCTTTCAT 79584667
Score = 89.7 bits (98), Expect = 2e-12
Identities = 174/257 (68%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679
||| | ||||| | |||||| | ||| | | || | |||||||||||||||| | |||
Sbjct 133022255 GTTCTCACAGCAGCATCAATCAAACCTTCTCTACTAACCATAGCATGGAAGAAAAACTCC 133022196
Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739
| ||| || || | || | || ||| ||| || ||||| || || || |
Sbjct 133022195 TGTGGTGTCAGACCTCGAAGGTACGAATTCTGAACAAACCCACGACTTTCAGGGCCATAG 133022136
Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799
|| || ||||| || || | || | | || | || | || || ||||| ||
Sbjct 133022135 TCATCTTTCGTAAATTGGGGTAATGTACGATCAACAAAACCAAACGGAATCCGCTTGCCC 133022076
Query 302800 TCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTG 302859
|||| ||||||||||| || || | |||||| ||||||||||| | |||||| ||
Sbjct 133022075 TCAATTTTCTGCTGTCCAAGACAAGCAATCATTTGCGAAATATTAATGAAACTGCCTTTT 133022016
Query 302860 GAGCCAGCATTTACCAT 302876
||||| ||| | |||||
Sbjct 133022015 GAGCCTGCAGTGACCAT 133021999
>seq10
Length=712180895
Score = 141 bits (156), Expect = 3e-28
Identities = 237/340 (70%), Gaps = 2/340 (1%)
Strand=Plus/Minus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
|| || ||||| |||||| | ||| ||||| ||||| ||| | | | |||
Sbjct 666083603 TTCCTCACGGTACCATCATATTTCACCATGATGTCCTCCATGGCCTTCACGAGCCTCCGC 666083544
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
|||||||| ||||| ||| ||||||||||| ||||| || | ||| | | |||||||
Sbjct 666083543 TGAATATATCCAGTCTCAGAAGTTTTTACAGCAGTATCGATCAAACCTTCTCTACCACCC 666083484
Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718
|||||||||||||| | || || ||| || || | || | ||| ||| |||||
Sbjct 666083483 ATAGCATGGAAGAAGAATTCCTCTGGTGTCAGGCCTCGAAGGTAAGAGTTCTGCACGAAT 666083424
Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTG-GTAAAGTGTGGCAGGGTCCTGTTCTCATA 302777
||||| ||||| | ||| | ||| | ||||| |||| || | || |
Sbjct 666083423 CCACGGCTTTCGGGACCGTTGTC-ATTTTGCGAGAAGTGGGGCAATGTACGACCAGCAAA 666083365
Query 302778 GCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGA 302837
|| ||||||| | ||| || ||||| ||||||||||| | ||| | | ||||||||||
Sbjct 666083364 TCCAAATGGGATCCTCTTGCCCTCAACATTCTGCTGTCCGACGCAAGCAGTCATCTGCGA 666083305
Query 302838 AATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877
|||||| | |||||| || ||||| ||| | ||||||
Sbjct 666083304 AATATTAATGAAACTGCCTTTTGAGCCTGCAGTAACCATA 666083265
Score = 123 bits (136), Expect = 7e-23
Identities = 233/340 (69%), Gaps = 2/340 (1%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
||||| ||||| ||| || | ||| ||||| ||||| ||| | | | |||
Sbjct 665864013 TTTCTCACGGTACCATCGTATTTCACCATGATGTCCTCCATGGCCTTCACGAGCCTCCGC 665864072
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
|||||||| ||||| || ||||| ||||| |||||||| | ||| | | |||||||
Sbjct 665864073 TGAATATATCCAGTCTCGGAAGTTTTCACAGCAGTATCAATCAAACCTTCTCTACCACCC 665864132
Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718
|||||||||||||| | || || ||| || || | || | ||| | | |||||
Sbjct 665864133 ATAGCATGGAAGAAGAATTCCTCTGGTGTCAGGCCTCGAAGGTAAGAGTTTTTCACGAAC 665864192
Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTG-GTAAAGTGTGGCAGGGTCCTGTTCTCATA 302777
||||| || || ||||| | ||| || ||||| |||| || | || |
Sbjct 665864193 CCACGGCTTTCAGGACTGTCGTC-ATTTTGCGTGAAGTGGGGCAATGTACGACCAGCAAA 665864251
Query 302778 GCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGA 302837
|| ||||||| | ||| || ||||| ||||||||||| | || | |||| |||||
Sbjct 665864252 ACCAAATGGGATCCTCTTGCCTTCAACATTCTGCTGTCCGACACAAGCGGTCATTTGCGA 665864311
Query 302838 AATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877
|||||| | |||||| || ||||| ||| | ||||||
Sbjct 665864312 AATATTAATGAAACTGCCTTTTGAGCCTGCAGTGACCATA 665864351
Score = 96.9 bits (106), Expect = 1e-14
Identities = 208/305 (68%), Gaps = 16/305 (5%)
Strand=Plus/Minus
Query 251403 GGCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAG 251462
||| || || |||||||| | ||| ||||| || ||||||||||| |||| |||
Sbjct 560192901 GGCAATGAGTCCACACTTCTCACAAACATGCACTCTGTAAGCATCGCTCTGGTCAAATAA 560192842
Query 251463 CCGACCCTTGGTGAAGCGAGATGCA---CCGTGTGAAATCATACAATCACGCTCCATTTC 251519
|| |||| ||| | ||||| || || | |||||| ||||| | |||||||||
Sbjct 560192841 CCTTTCCTTCAAGAA---AAATGCAGCTCCATGAGCAATCATGCAATCCCTCTCCATTTC 560192785
Query 251520 ACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAAC 251579
|| ||||| ||||||||||| || | | ||||| || ||||| | || || |
Sbjct 560192784 TCCAAAACGGAGACCACCATCACGTGAGCGCCCCTCTGCTGGCTGTCTGGTCAGTATCTG 560192725
Query 251580 CATAGGAC--CGA--TGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCT 251635
| ||||| ||| | || | || ||| |||| ||||||||||| || | ||
Sbjct 560192724 GACAGGACCACGACCTCTAGAGTGAATTTTG----TCATCCACCATATGCTTAAGTCTCT 560192669
Query 251636 GGTAGAATGCGGGACCGATGAAGATGCTCGAAGGC-ATTTGCTCTCCAGTTAGAGCGTTA 251694
||||| | | ||||| | ||| || | | || | |||| ||| ||||| || | ||
Sbjct 560192668 GGTAGTAAGTTGGACCTAAGAAAATCATTGCAGTCAATTTTCTC-CCAGTATGACCATTG 560192610
Query 251695 TACAT 251699
|||||
Sbjct 560192609 TACAT 560192605
>seq9
Length=700855599
Score = 141 bits (156), Expect = 3e-28
Identities = 239/341 (70%), Gaps = 4/341 (1%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
||||| ||||| |||||| | ||| ||||| ||||| ||| | | | |||
Sbjct 649091303 TTTCTCACGGTACCATCATATTTCACCATGATGTCCTCCATGGCCTTCACAAGCCTCCGC 649091362
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
|||||||| ||||| ||| ||||||||||| ||||| || | ||| | | |||||||
Sbjct 649091363 TGAATATATCCAGTCTCAGAAGTTTTTACAGCAGTATCGATCAAACCTTCTCTACCACCC 649091422
Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718
|||||||||||||| | || || ||| || || || | ||| |||| || ||
Sbjct 649091423 ATAGCATGGAAGAAGAATTCCTCTGGTGTCAGGCCTTGAAGGTAAGAGTTCTCCACAAAT 649091482
Query 302719 CCACGCGCCT-CGGGCGAATCGTCGAACTTG-GTAAAGTGTGGCAGGGTCCTGTTCTCAT 302776
||||| || | |||| | ||| | ||| | ||||| |||| || | ||
Sbjct 649091483 CCACG-GCTTCCGGGACCGTTGTC-ATTTTGCGAGAAGTGGGGCAATGTACGACCAGCAA 649091540
Query 302777 AGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCG 302836
| || ||||||| | ||| || ||||| ||||||||||| | ||| | | |||||||||
Sbjct 649091541 ATCCAAATGGGATCCTCTTGCCCTCAACATTCTGCTGTCCGACGCAAGCAGTCATCTGCG 649091600
Query 302837 AAATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877
||||||| | |||||| || ||||| ||| | ||||||
Sbjct 649091601 AAATATTAATGAAACTGCCTTTTGAGCCTGCAGTAACCATA 649091641
Score = 141 bits (156), Expect = 3e-28
Identities = 237/340 (70%), Gaps = 2/340 (1%)
Strand=Plus/Minus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
|| || ||||| |||||| | ||| ||||| ||||| ||| | | | |||
Sbjct 649317406 TTCCTCACGGTACCATCATATTTCACCATGATGTCCTCCATGGCCTTCACGAGCCTCCGC 649317347
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
|||||||| ||||| ||| ||||||||||| ||||| || | ||| | | |||||||
Sbjct 649317346 TGAATATATCCAGTCTCAGAAGTTTTTACAGCAGTATCGATCAAACCTTCTCTACCACCC 649317287
Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718
|||||||||||||| | || || ||| || || | || | ||| ||| |||||
Sbjct 649317286 ATAGCATGGAAGAAGAATTCCTCTGGTGTCAGGCCTCGAAGGTAAGAGTTCTGCACGAAT 649317227
Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTG-GTAAAGTGTGGCAGGGTCCTGTTCTCATA 302777
||||| ||||| | ||| | ||| | ||||| |||| || | || |
Sbjct 649317226 CCACGGCTTTCGGGACCGTTGTC-ATTTTGCGAGAAGTGGGGCAATGTACGACCAGCAAA 649317168
Query 302778 GCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGA 302837
|| ||||||| | ||| || ||||| ||||||||||| | ||| | | ||||||||||
Sbjct 649317167 TCCAAATGGGATCCTCTTGCCCTCAACATTCTGCTGTCCGACGCAAGCAGTCATCTGCGA 649317108
Query 302838 AATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877
|||||| | |||||| || ||||| ||| | ||||||
Sbjct 649317107 AATATTAATGAAACTGCCTTTTGAGCCTGCAGTAACCATA 649317068
Score = 96.9 bits (106), Expect = 1e-14
Identities = 208/305 (68%), Gaps = 16/305 (5%)
Strand=Plus/Minus
Query 251403 GGCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAG 251462
||| || || |||||||| | ||| ||||| || ||||||||||| |||| |||
Sbjct 568010870 GGCAATGAGTCCACACTTCTCACAAACATGCACTCTGTAAGCATCGCTCTGGTCAAATAA 568010811
Query 251463 CCGACCCTTGGTGAAGCGAGATGCA---CCGTGTGAAATCATACAATCACGCTCCATTTC 251519
|| |||| ||| | ||||| || || | |||||| ||||| | |||||||||
Sbjct 568010810 CCTTTCCTTCAAGAA---AAATGCAGCTCCATGAGCAATCATGCAATCCCTCTCCATTTC 568010754
Query 251520 ACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAAC 251579
|| ||||| ||||||||||| || | | ||||| || ||||| | || || |
Sbjct 568010753 TCCAAAACGGAGACCACCATCACGTGAGCGCCCCTCTGCTGGCTGTCTGGTCAGTATCTG 568010694
Query 251580 CATAGGAC--CGA--TGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCT 251635
| ||||| ||| | || | || ||| |||| ||||||||||| || | ||
Sbjct 568010693 GACAGGACCACGACCTCTAGAGTGAATTTTG----TCATCCACCATATGCTTAAGTCTCT 568010638
Query 251636 GGTAGAATGCGGGACCGATGAAGATGCTCGAAGGC-ATTTGCTCTCCAGTTAGAGCGTTA 251694
||||| | | ||||| | ||| || | | || | |||| ||| ||||| || | ||
Sbjct 568010637 GGTAGTAAGTTGGACCTAAGAAAATCATTGCAGTCAATTTTCTC-CCAGTATGACCATTG 568010579
Query 251695 TACAT 251699
|||||
Sbjct 568010578 TACAT 568010574
>seq14
Length=755408349
Score = 140 bits (154), Expect = 1e-27
Identities = 222/315 (70%), Gaps = 4/315 (1%)
Strand=Plus/Plus
Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624
||||||||| |||||| ||| | | | ||||||||||| || || ||| |||||
Sbjct 376695947 CATAATGTCCTCCATAGCCTTCACGAGCCTCCGCTGAATATATCCCGTCTCAGAGGTTTT 376696006
Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684
||||| |||||||| | ||| | | ||||||||||||||||||||| | |||| ||
Sbjct 376696007 CACAGCAGTATCAATCAAACCTTCTCTACCACCCATAGCATGGAAGAAAAATTCTTGTGG 376696066
Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCC--TCGGGCGAATCGTCG 302742
| || || | || | ||| ||||||| ||||| |||| | || || | |||
Sbjct 376696067 TGTCAGACCTCGAAGGTAAGAGTTCTCAAC-AAACC-CGCGACTTTCAGGGCCGTAGTCA 376696124
Query 302743 AACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCA 302802
|| || ||||| |||| || | | | | || |||| || ||||| || |||
Sbjct 376696125 TCTTTCGTGAAGTGGGGCAATGTACGATCAACGAAACCAAATGGAATCCGCTTGCCCTCA 376696184
Query 302803 ACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAG 302862
|| ||||||||||| | || | | |||| ||||||||||| | |||||| || |||
Sbjct 376696185 ACATTCTGCTGTCCGACACAAGCAGTCATTTGCGAAATATTAATGAAACTGCCTTTTGAG 376696244
Query 302863 CCAGCATTTACCATA 302877
|| ||| | ||||||
Sbjct 376696245 CCTGCAGTGACCATA 376696259
Score = 118 bits (130), Expect = 3e-21
Identities = 158/219 (72%), Gaps = 3/219 (1%)
Strand=Plus/Plus
Query 156050 ACCATTCCTCTTGCC---ACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAG 156106
||| || |||||||| ||| ||||||||||| |||||||| | ||||||||||| ||
Sbjct 35287573 ACCCTTTCTCTTGCCTCCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAA 35287632
Query 156107 CATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCG 156166
|||||||| ||| |||||||| || ||||| ||||| ||||||| ||| | ||
Sbjct 35287633 CATAGGAACAATCCCATTGGATGTTCCATTTGTTCCTCGAATATAGCTCCCAATAGCACG 35287692
Query 156167 AACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTT 156226
|| ||| |||| | | ||||| || || | ||||| || ||| ||||||||
Sbjct 35287693 AATATTGTGAACAGAAACACCAATTCCTCCAGCAGATTTACTTATGACAGCACATTCCTT 35287752
Query 156227 TACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265
| ||||| | || || ||||| ||||||| |||
Sbjct 35287753 CAGAGTATCATAGATTCCCTCAATGCTGTCATCTTTCAT 35287791
>seq11
Length=621432051
Score = 102 bits (112), Expect = 2e-16
Identities = 155/220 (70%), Gaps = 3/220 (1%)
Strand=Plus/Plus
Query 156049 TACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105
|||| ||||||||| || || ||||| ||||| || ||||| | |||||| |||| ||
Sbjct 597005693 TACCTTTCCTCTTGCCTCCGCCTTGATCAACATAGCGTGCAGTGTCATTGAAAACACGTA 597005752
Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165
|||| || | ||| ||||| ||||| ||||| ||||| ||||| | |||| | |
Sbjct 597005753 GCATGGGTACAATTCCATTAGAAGTTCCATTAGTTCCACGAATGTAACTGCCAGTAGCCC 597005812
Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225
|||| || ||||| | ||||| || || | |||| || ||||||||||
Sbjct 597005813 GAACGTTGTGAATTGAGACACCAATCCCTCCAGCAGATTTGCTTATGGAAGCGCATTCCG 597005872
Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265
| ||||| |||| || ||||| |||||||| |||
Sbjct 597005873 AGAGAGTATCATAAATTCCCTCAATGCTATCATCTTTCAT 597005912
>seq5
Length=754274518
Score = 98.7 bits (108), Expect = 3e-15
Identities = 215/317 (68%), Gaps = 4/317 (1%)
Strand=Plus/Plus
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
||||| ||||||||||| ||||| || | | || || | | || | || |
Sbjct 604884045 ACCAATTGCATCAATTTCATCAATAAATACAATACTAGGTGCACATTCCCGAGCTTCTTG 604884104
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
|||||| |||| || | ||||| ||||| ||||||| ||||||| | || || ||| |
Sbjct 604884105 AAATAAGCCTCTCACCCTGGATGGTCCAACACCAACAAACATTTCCAAGAAGTCTGAACC 604884164
Query 289149 GGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207
|||| | || | ||| | |||| | || || || || | || || || ||||
Sbjct 604884165 AGATA-TAGACAAGAACGGTACACCAGACTCTCCAGCAGTAGCTTTAGCAAGGAGAGTCT 604884223
Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCAGAC 289266
| ||||| ||||| ||||| | ||| | ||||| |||| ||| || ||||| |
Sbjct 604884224 TTCCTGTGCCAGGGGGTCCACAAAGAAGAGCACCCTTCGGTATTTTAGCTCCCAG-TGCT 604884282
Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326
| |||||| ||||| | || | || | |||| |||| | ||| | ||| || |||
Sbjct 604884283 TCATATTTGTCAGGATTTTTCAGGAAATGAACAAATTCCATGATTTCTTGTTTAGCTTCA 604884342
Query 289327 TCACATCCTGCTACATC 289343
||||| || ||||||||
Sbjct 604884343 TCACAACCAGCTACATC 604884359
>seq55813
Length=437
Score = 96.9 bits (106), Expect = 1e-14
Identities = 208/305 (68%), Gaps = 16/305 (5%)
Strand=Plus/Plus
Query 251403 GGCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAG 251462
||| || || |||||||| | ||| ||||| || ||||||||||| |||| |||
Sbjct 54 GGCAATGAGTCCACACTTCTCACAAACATGCACTCTGTAAGCATCGCTCTGGTCAAATAA 113
Query 251463 CCGACCCTTGGTGAAGCGAGATGCA---CCGTGTGAAATCATACAATCACGCTCCATTTC 251519
|| |||| ||| | ||||| || || | |||||| ||||| | |||||||||
Sbjct 114 CCTTTCCTTCAAGAA---AAATGCAGCTCCATGAGCAATCATGCAATCCCTCTCCATTTC 170
Query 251520 ACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAAC 251579
|| ||||| ||||||||||| || | | ||||| || ||||| | || || |
Sbjct 171 TCCAAAACGGAGACCACCATCACGTGAGCGCCCCTCTGCTGGCTGTCTGGTCAGTATCTG 230
Query 251580 CATAGGAC--CGA--TGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCT 251635
| ||||| ||| | || | || ||| |||| ||||||||||| || | ||
Sbjct 231 GACAGGACCACGACCTCTAGAGTGAATTTTG----TCATCCACCATATGCTTAAGTCTCT 286
Query 251636 GGTAGAATGCGGGACCGATGAAGATGCTCGAAGGC-ATTTGCTCTCCAGTTAGAGCGTTA 251694
||||| | | ||||| | ||| || | | || | |||| ||| ||||| || | ||
Sbjct 287 GGTAGTAAGTTGGACCTAAGAAAATCATTGCAGTCAATTTTCTC-CCAGTATGACCATTG 345
Query 251695 TACAT 251699
|||||
Sbjct 346 TACAT 350
>seq6
Length=841096276
Score = 84.2 bits (92), Expect = 6e-11
Identities = 212/317 (67%), Gaps = 4/317 (1%)
Strand=Plus/Plus
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
||||| ||||||||||| ||||| || | | || || | | || | || |
Sbjct 629695007 ACCAATTGCATCAATTTCATCAATAAATACAATACTGGGTGCACATTCCCGAGCTTCTTG 629695066
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
|||||| ||| || | ||||| ||||| ||||||| ||||||| | || || ||| |
Sbjct 629695067 AAATAAGCTTCTCACCCTGGATGGTCCAACACCAACAAACATTTCCAAGAAGTCTGAACC 629695126
Query 289149 GGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207
|| | | || | ||| | |||| | || || || || | || || || ||||
Sbjct 629695127 AGA-AATAGACAAGAAAGGTACACCAGACTCTCCAGCAGTAGCTTTAGCAAGGAGAGTCT 629695185
Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCAGAC 289266
| ||||| ||||| || || | ||| | ||||| |||| ||| || ||||| |
Sbjct 629695186 TTCCTGTGCCAGGGGGGCCACAAAGAAGAGCACCCTTCGGTATTTTAGCTCCCAG-TGCT 629695244
Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326
| |||||| ||||| | || | || | |||| |||| | ||| | ||| || |||
Sbjct 629695245 TCATATTTGTCAGGATTTTTCAGGAAATGAACAAATTCCATGATTTCTTGTTTAGCTTCA 629695304
Query 289327 TCACATCCTGCTACATC 289343
||||| || ||||||||
Sbjct 629695305 TCACAACCAGCTACATC 629695321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1469005281286158
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |