Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_021529.2
Length=247511
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 93.3 7e-14
>seq129631
Length=630463
Score = 93.3 bits (102), Expect = 7e-14
Identities = 265/402 (66%), Gaps = 14/402 (3%)
Strand=Plus/Plus
Query 63672 AAACTTTCTTTACCAACCCCGATCATGGCAGGTGTTCGTACGCCAACTCGACAATTTAGC 63731
||| | ||| |||| || ||||| ||| |||| || | || |||||||| ||||||||
Sbjct 522206 AAAATATCTCTACCCACACCGATTATGTCAGGAGTAAGAACACCAACTCGTCAATTTAGT 522265
Query 63732 TCATGTGTTAAAATCGAATCTGGCGACTCT-----CTGCATTCAGTCAACAAAGTAGCCG 63786
|| ||||| ||| |||| || || | || ||| | | |||| |||
Sbjct 522266 TCTTGTGTGTTAATTGAATGTGCAGATAATTTAAACTCTATTAATGCTACAAC-TAGT-- 522322
Query 63787 AAGCAATCATCAACTATATCAGTAAACGTGCTGGTATCGGTGTTAATGGCGGTGCTATTC 63846
||||| | || ||| | | |||| || || || || |||| | ||| ||||
Sbjct 522323 --GCAATTGTAAAATATGTTTCTCAACGAGCAGGAATAGGCATTAACGCTGGTCAAATTC 522380
Query 63847 GTGCTGAAGGCTCGGTTGTTCGAGCAGGTGAA--ATTCGACACACTGGTGTAATCCCATT 63904
| ||| ||| | | || || ||| ||| | || | | |||| ||| ||
Sbjct 522381 GAGCTTTAGGAAGTCCTATCAGAAATGGAGAAGCATTTCATAC-CGGATGTATTCCTTTT 522439
Query 63905 CTGGAAACACTTTCAGACTGCTGTGAAGTCATGTTCACAAGGTGGTGTTCGTGGTGGTGC 63964
| |||||||| || | || || || || ||||| |||||||| ||| | || || ||
Sbjct 522440 -TATAAACACTTCCAAAGCGCAGTAAAATCTTGTTCTCAAGGTGGAGTTAGAGGAGGGGC 522498
Query 63965 TGCAACGCTAACTTACCCGATTTGGCATTTAGAAGTTGAAAAACTTTTGGTGCTGAAGAA 64024
||||| | |||||| || |||||| ||||| ||||||| | || || | || ||
Sbjct 522499 CGCAACTGTTTTTTACCCAATATGGCATCTAGAAATTGAAAATTTATTAGTTTTAAAAAA 522558
Query 64025 CAACAAAGGCGTTGAAGAAAACCGTATTCGTCATCTTGACTA 64066
|| | ||| |||||||||| | | ||||||||||| ||
Sbjct 522559 TAATAGAGGAATTGAAGAAAATAGAGTACGTCATCTTGATTA 522600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 790430946395440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |