Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_021529.2 Length=247511 Score E Sequences producing significant alignments: (Bits) Value seq129631 93.3 7e-14 >seq129631 Length=630463 Score = 93.3 bits (102), Expect = 7e-14 Identities = 265/402 (66%), Gaps = 14/402 (3%) Strand=Plus/Plus Query 63672 AAACTTTCTTTACCAACCCCGATCATGGCAGGTGTTCGTACGCCAACTCGACAATTTAGC 63731 ||| | ||| |||| || ||||| ||| |||| || | || |||||||| |||||||| Sbjct 522206 AAAATATCTCTACCCACACCGATTATGTCAGGAGTAAGAACACCAACTCGTCAATTTAGT 522265 Query 63732 TCATGTGTTAAAATCGAATCTGGCGACTCT-----CTGCATTCAGTCAACAAAGTAGCCG 63786 || ||||| ||| |||| || || | || ||| | | |||| ||| Sbjct 522266 TCTTGTGTGTTAATTGAATGTGCAGATAATTTAAACTCTATTAATGCTACAAC-TAGT-- 522322 Query 63787 AAGCAATCATCAACTATATCAGTAAACGTGCTGGTATCGGTGTTAATGGCGGTGCTATTC 63846 ||||| | || ||| | | |||| || || || || |||| | ||| |||| Sbjct 522323 --GCAATTGTAAAATATGTTTCTCAACGAGCAGGAATAGGCATTAACGCTGGTCAAATTC 522380 Query 63847 GTGCTGAAGGCTCGGTTGTTCGAGCAGGTGAA--ATTCGACACACTGGTGTAATCCCATT 63904 | ||| ||| | | || || ||| ||| | || | | |||| ||| || Sbjct 522381 GAGCTTTAGGAAGTCCTATCAGAAATGGAGAAGCATTTCATAC-CGGATGTATTCCTTTT 522439 Query 63905 CTGGAAACACTTTCAGACTGCTGTGAAGTCATGTTCACAAGGTGGTGTTCGTGGTGGTGC 63964 | |||||||| || | || || || || ||||| |||||||| ||| | || || || Sbjct 522440 -TATAAACACTTCCAAAGCGCAGTAAAATCTTGTTCTCAAGGTGGAGTTAGAGGAGGGGC 522498 Query 63965 TGCAACGCTAACTTACCCGATTTGGCATTTAGAAGTTGAAAAACTTTTGGTGCTGAAGAA 64024 ||||| | |||||| || |||||| ||||| ||||||| | || || | || || Sbjct 522499 CGCAACTGTTTTTTACCCAATATGGCATCTAGAAATTGAAAATTTATTAGTTTTAAAAAA 522558 Query 64025 CAACAAAGGCGTTGAAGAAAACCGTATTCGTCATCTTGACTA 64066 || | ||| |||||||||| | | ||||||||||| || Sbjct 522559 TAATAGAGGAATTGAAGAAAATAGAGTACGTCATCTTGATTA 522600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 790430946395440