Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq129631 136 1e-27 >seq129631 Length=630463 Score = 136 bits (150), Expect = 1e-27 Identities = 217/309 (70%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 33163 ATTATGGCATCTCGAGGAATCAACAAAGTAATCATT-TTGGGCACTCTCGGACAAGACCC 33221 ||||||||| | |||| | || ||||||||| | |||| |||| | || ||||| || Sbjct 140649 ATTATGGCAAGTAGAGGTGTAAATAAAGTAATCTTAATTGGTCACT-TAGGCCAAGATCC 140707 Query 33222 GGAAGTTAAATATATGCCTTCTGGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGA 33281 |||||| |||||||| ||| || || ||| || | || ||||| ||||| Sbjct 140708 TGAAGTTCGTTATATGCCAAATGGTAATGCAGTAGTAAATATGACACTTGCAACTTCAGA 140767 Query 33282 GCAGTGGAACGATAAAGCAACAGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGT 33341 | | ||||| |||||| || || ||||| |||||| | |||||||||||| | | || Sbjct 140768 GAACTGGAAAGATAAAAATACTGGTGAAAATAAAGAGAAAACAGAATGGCATAGAATAGT 140827 Query 33342 TATCTTCGGAAAGCTGGCAGAGGTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTA 33401 | || ||||| |||| || | ||||| ||||| || | ||||| ||||| || || Sbjct 140828 ATTATTTGGAAAATTGGCTGAAATTGCTGGAGAATATTTGAGAAAAGGTTCTCAAGTATA 140887 Query 33402 TGTAGAAGGAAAATTACGTACTCGCAAATGGACAGATCAAAGCGGTGTTGAAAAATACAC 33461 | | |||||| | | ||| | |||||| ||| |||| ||| ||||| || || Sbjct 140888 TATTGAAGGATCCCTTCAAACTAGAAAATGGCAAGACCAAAATGGTCTTGAACGTTATAC 140947 Query 33462 TACTGAAAT 33470 || ||||| Sbjct 140948 AACAGAAAT 140956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151775533790712