Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_021534.1
Length=47552
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 136 1e-27
>seq129631
Length=630463
Score = 136 bits (150), Expect = 1e-27
Identities = 217/309 (70%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 33163 ATTATGGCATCTCGAGGAATCAACAAAGTAATCATT-TTGGGCACTCTCGGACAAGACCC 33221
||||||||| | |||| | || ||||||||| | |||| |||| | || ||||| ||
Sbjct 140649 ATTATGGCAAGTAGAGGTGTAAATAAAGTAATCTTAATTGGTCACT-TAGGCCAAGATCC 140707
Query 33222 GGAAGTTAAATATATGCCTTCTGGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGA 33281
|||||| |||||||| ||| || || ||| || | || ||||| |||||
Sbjct 140708 TGAAGTTCGTTATATGCCAAATGGTAATGCAGTAGTAAATATGACACTTGCAACTTCAGA 140767
Query 33282 GCAGTGGAACGATAAAGCAACAGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGT 33341
| | ||||| |||||| || || ||||| |||||| | |||||||||||| | | ||
Sbjct 140768 GAACTGGAAAGATAAAAATACTGGTGAAAATAAAGAGAAAACAGAATGGCATAGAATAGT 140827
Query 33342 TATCTTCGGAAAGCTGGCAGAGGTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTA 33401
| || ||||| |||| || | ||||| ||||| || | ||||| ||||| || ||
Sbjct 140828 ATTATTTGGAAAATTGGCTGAAATTGCTGGAGAATATTTGAGAAAAGGTTCTCAAGTATA 140887
Query 33402 TGTAGAAGGAAAATTACGTACTCGCAAATGGACAGATCAAAGCGGTGTTGAAAAATACAC 33461
| | |||||| | | ||| | |||||| ||| |||| ||| ||||| || ||
Sbjct 140888 TATTGAAGGATCCCTTCAAACTAGAAAATGGCAAGACCAAAATGGTCTTGAACGTTATAC 140947
Query 33462 TACTGAAAT 33470
|| |||||
Sbjct 140948 AACAGAAAT 140956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151775533790712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |