Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_021806.1
Length=100418
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 114 8e-21
>seq129631
Length=630463
Score = 114 bits (126), Expect = 8e-21
Identities = 191/277 (69%), Gaps = 12/277 (4%)
Strand=Plus/Plus
Query 96122 CTTCTATAGCTTTAAAGCCTTCTTCTAGAATTTTCTGAGCTAATACTGTAGCTGTGGTTG 96181
|| ||| |||||| || ||||| | || || || ||||||| |||||||| ||||
Sbjct 61337 CTGCTACAGCTTTTAAACCTTCATTTACTATAGATTGTGCTAATAACGTAGCTGTTGTTG 61396
Query 96182 TTCCATCTCCTACTTCTGTATTAGTATTCTCAGCTACTTGTTTAATCATTTGAGCACCTA 96241
| ||||| ||| || | ||| | || || |||| ||| | ||||||||| || |
Sbjct 61397 TACCATCACCTGCTGCATCATTTGCTTTTGATGCAACTTCTTTTACCATTTGAGCTCCCA 61456
Query 96242 AGTTTTCAAATGGATCTTCTAAATGAATTTCTCTAGCCACACTTACACCATCTTTAGTAA 96301
||||||||| |||||||| | |||||| | || || ||| || ||||||||||
Sbjct 61457 TGTTTTCAAACTTATCTTCTAGTTCAATTTCACGGGCTACTGATACTCCGTCTTTAGTAA 61516
Query 96302 TGATTGG------ATTATACTGGTCTAAACCTAGTATAACATTCTTACCTGATGGTCCTA 96355
| | || | | | | |||||| || || || ||||| ||||||||
Sbjct 61517 TACTAGGTGCTCCAAAAGATTTATCTAAAACT------ACGTTTCTACCTTTTGGTCCTA 61570
Query 96356 GAGTTACTTTAACTGCATTAGCTAAAGCATCTACACC 96392
||||||||||||||||| ||||| ||| ||| ||
Sbjct 61571 AAGTTACTTTAACTGCATCTGCTAATACATTTACTCC 61607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 320628973050346
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |