Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_021806.1 Length=100418 Score E Sequences producing significant alignments: (Bits) Value seq129631 114 8e-21 >seq129631 Length=630463 Score = 114 bits (126), Expect = 8e-21 Identities = 191/277 (69%), Gaps = 12/277 (4%) Strand=Plus/Plus Query 96122 CTTCTATAGCTTTAAAGCCTTCTTCTAGAATTTTCTGAGCTAATACTGTAGCTGTGGTTG 96181 || ||| |||||| || ||||| | || || || ||||||| |||||||| |||| Sbjct 61337 CTGCTACAGCTTTTAAACCTTCATTTACTATAGATTGTGCTAATAACGTAGCTGTTGTTG 61396 Query 96182 TTCCATCTCCTACTTCTGTATTAGTATTCTCAGCTACTTGTTTAATCATTTGAGCACCTA 96241 | ||||| ||| || | ||| | || || |||| ||| | ||||||||| || | Sbjct 61397 TACCATCACCTGCTGCATCATTTGCTTTTGATGCAACTTCTTTTACCATTTGAGCTCCCA 61456 Query 96242 AGTTTTCAAATGGATCTTCTAAATGAATTTCTCTAGCCACACTTACACCATCTTTAGTAA 96301 ||||||||| |||||||| | |||||| | || || ||| || |||||||||| Sbjct 61457 TGTTTTCAAACTTATCTTCTAGTTCAATTTCACGGGCTACTGATACTCCGTCTTTAGTAA 61516 Query 96302 TGATTGG------ATTATACTGGTCTAAACCTAGTATAACATTCTTACCTGATGGTCCTA 96355 | | || | | | | |||||| || || || ||||| |||||||| Sbjct 61517 TACTAGGTGCTCCAAAAGATTTATCTAAAACT------ACGTTTCTACCTTTTGGTCCTA 61570 Query 96356 GAGTTACTTTAACTGCATTAGCTAAAGCATCTACACC 96392 ||||||||||||||||| ||||| ||| ||| || Sbjct 61571 AAGTTACTTTAACTGCATCTGCTAATACATTTACTCC 61607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 320628973050346