Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq13 136 3e-27
seq12 136 3e-27
seq14 132 4e-26
seq11 131 1e-25
seq2 91.5 1e-13
>seq13
Length=727576108
Score = 136 bits (150), Expect = 3e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| |||||||| || || || || || || |||||||| |||||||||| |||||| |
Sbjct 658880800 CGGAGCACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCCGCAAGAGTGCGACCA 658880859
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| || ||||||||| | |||| | ||||| ||||| || || |||||||||
Sbjct 658880860 TCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCTTTG 658880919
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
||||| | || || || | || | ||||| ||| ||| || || || || ||
Sbjct 658880920 TCTTGGATCTTCGCCTTCACGTTGTCAATGGTGTCCGAAGATTCCACCTCCAGGGTGATG 658880979
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||||||| | ||| || || || ||||||||
Sbjct 658880980 GTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 658881014
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|||||||| || | || || || || |||||||| |||||||||| |||||| |||
Sbjct 658874562 AGCACCAAGTGTACAGTAGACTCCTTCTGAATGTTGTAATCCGCAAGAGTGCGACCATCC 658874621
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
||||| || ||||||||| | |||| | ||||| ||||| || || |||||||||||
Sbjct 658874622 TCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCTTTGTCC 658874681
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | || || ||| | || | ||||| ||| ||| || || || || || ||
Sbjct 658874682 TGGATCTTCGCCTTCACATTGTCAATGGTGTCCGAAGATTCCACCTCCAGGGTGATGGTC 658874741
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||||||| | ||| || || || ||||||||
Sbjct 658874742 TTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 658874773
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||| ||||| || || || || |||||||| || ||||| | ||||||
Sbjct 643789415 ACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCCGCCAAGGTGCGGCC 643789474
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || |||||| | || | | ||||| ||||| ||||| ||||| ||
Sbjct 643789475 ATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT 643789534
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || || || | || | |||||||| || || || || || ||
Sbjct 643789535 GTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACCTCCAGGGTGAT 643789594
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || | ||| || ||||||||||||||
Sbjct 643789595 GGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCAT 643789630
Score = 114 bits (126), Expect = 1e-20
Identities = 155/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| ||||||| || || || || || || || ||||||||||| || | |||||| |
Sbjct 658881028 CGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTATAATCAGCTAGGGTGCGGCCA 658881087
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || |||||||| | || | | ||||| |||||||| |||||||| ||
Sbjct 658881088 TCTTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGCGGGATACCCTCCTTA 658881147
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || |||||| | || | ||||||| | ||||| ||||| || ||
Sbjct 658881148 TCCTGGATCTTCGCCTTGACATTGTCGATCGTGTCAGGA--CTCTACCTCAAGTGTGATG 658881205
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || | ||| || ||||| ||||||||
Sbjct 658881206 GTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 658881240
Score = 113 bits (124), Expect = 3e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| |||||||||||||| ||||| || || || ||||||||||| || | |||||| |
Sbjct 643772564 CGGAGCACCAAATGAAGGGTGGACTCCTTCTGGATGTTATAATCAGCCAGGGTGCGGCCA 643772623
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || || |||||| | || | | ||||| || || || || ||||| |||
Sbjct 643772624 TCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTG 643772683
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || || ||| | || | ||||| ||| || || || ||||| ||
Sbjct 643772684 TCCTGGATCTTCGCCTTCACATTGTCGATCGTGTCCGAAGACTCAACCTCCAGAGTGATG 643772743
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || | ||| || ||||| || |||||
Sbjct 643772744 GTCTTGCCCGTGAGGGTCTTCACAAAGATTTGCAT 643772778
Score = 87.8 bits (96), Expect = 1e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| ||||| | | ||| |||||||| ||||| || ||||| |||||||| ||||| ||
Sbjct 689948018 TCCACCCCTAAGCCTCAGGACCAAATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGC 689947959
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| || || ||| || | || || || ||| | || | ||||||||||| || ||
Sbjct 689947958 TAATGTTCGCCCATCTTCCAACTGCTTTCCGGCAAAAATTAGCCTTTGCTGATCTGGAGG 689947899
Query 29679 AATACCCTCTTTGTCTTG 29696
||| ||||| ||||| ||
Sbjct 689947898 AATGCCCTCCTTGTCCTG 689947881
>seq12
Length=703217322
Score = 136 bits (150), Expect = 3e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
||||| || | |||||| |||||||||||||| ||||||||||| || | ||| || |
Sbjct 511296271 CGCAGGACAAGATGAAGAGTGGATTCTTTTTGGATGTTATAATCTGCCAAGGTACGCCCA 511296330
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || || || ||| | || | || |||||||| || ||||| ||||| |||
Sbjct 511296331 TCCTCCAGCTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAGGAATTCCCTCCTTG 511296390
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | ||| || ||| | || | ||||| || || || |||||||| ||
Sbjct 511296391 TCCTGGATCTTTGCCTTCACATTATCGATGGTGTCGGAGCTCTCCACCTCAAGAGTAATG 511296450
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || |||||||| || || ||||| ||||||||
Sbjct 511296451 GTCTTTCCAGTTAACGTCTTGACAAAAATCTGCAT 511296485
Score = 109 bits (120), Expect = 4e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || ||||| ||||| || || || || || || || |||||||| | || || |
Sbjct 511296499 CGGAGAACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAATCCGCCAATGTACGCCCA 511296558
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| || || |||||| | || | || ||||| || ||||| ||||| || ||
Sbjct 511296559 TCCTCGAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATACCTTCCTTA 511296618
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || || ||| | || | ||||| || || ||||||||||| ||
Sbjct 511296619 TCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCCACTTCAAGAGTGATG 511296678
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||||| || || ||||||||||||||
Sbjct 511296679 GTCTTTCCAGTTAGTGTCTTGACAAATATCTGCAT 511296713
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || |||| ||||| || || || || || ||||| || || || | ||||||
Sbjct 96648704 CGGAGTACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCG 96648645
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| || ||||| || | |||| | ||||| ||||| ||||||||||| |||
Sbjct 96648644 TCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTG 96648585
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | ||| || || | || | ||||| || || || || | || ||
Sbjct 96648584 TCCTGGATCTTTGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTGATG 96648525
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || | ||| || || || ||||||||
Sbjct 96648524 GTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 96648490
Score = 86.0 bits (94), Expect = 5e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| ||||||| || || |||||||| || ||||||||||| || || | |||||||
Sbjct 176469327 CGGAGCACCAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGCGAGGGTGCGACCG 176469386
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || |||||||| | || | | ||||| ||||| ||||| ||||| |||
Sbjct 176469387 TCCTCCAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 176469446
Query 29692 TC 29693
||
Sbjct 176469447 TC 176469448
Score = 86.0 bits (94), Expect = 5e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||||| | ||| ||||||||||| || || ||||| |||||||| ||||| ||
Sbjct 196921664 CCACCCCTCAGCCTCAGGACCAAATGAAGTGTCGACTCTTTCTGAATGTTGTAATCAGCT 196921723
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| || || || || |||||| | |||| ||||| || || || ||
Sbjct 196921724 AATGTCCGTCCATCTTCCAGCTGCTTTCCAGCAAAAATCAGCCTTTGTTGGTCTGGTGGG 196921783
Query 29680 ATACCCTCTTTGTCTTG 29696
|| || || ||||| ||
Sbjct 196921784 ATGCCTTCCTTGTCCTG 196921800
>seq14
Length=755408349
Score = 132 bits (146), Expect = 4e-26
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || ||||| || || |||||||||||||| ||||| ||||| |||| |||||
Sbjct 638076852 ACGGAGAACCAAGTGCAGAGTGGATTCTTTTTGGATGTTGTAATCAGCAAGAGTGCGTCC 638076793
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || ||||| ||||| ||| | ||||| | ||||| || || || || ||||||||
Sbjct 638076792 ATCCTCAAGTTGCTTGCCGGCAAAGATCAACCGCTGCTGGTCTGGGGGGATGCCCTCTTT 638076733
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || ||||||| | || | ||||| ||| || || || || || ||
Sbjct 638076732 GTCCTGGATCTTCGCTTTGACATTATCGATCGTGTCGGAAGACTCAACCTCGAGGGTGAT 638076673
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || | ||| || ||||| || |||||
Sbjct 638076672 GGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 638076637
Score = 127 bits (140), Expect = 2e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| ||||||||||| || || || || || |||||||| |||||||| | |||||| |
Sbjct 655249809 CGGAGCACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAATCCGCCAGAGTGCGACCA 655249868
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || ||||| ||| | ||||| || ||||| || || || || ||||| |||
Sbjct 655249869 TCCTCAAGCTGCTTGCCCGCAAAGATCAACCTCTGCTGGTCTGGAGGGATGCCCTCCTTG 655249928
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || || ||| | || | || || ||| || || || ||||| ||
Sbjct 655249929 TCCTGGATCTTCGCCTTCACATTGTCGATTGTATCCGAAGACTCGACCTCTAGAGTGATG 655249988
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||||||| | |||||| || || ||||||||
Sbjct 655249989 GTCTTGCCAGTGAGGGTTTTCACGAAGATCTGCAT 655250023
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||||||||| || ||||| || || || ||||| || || |||| |||||| |||
Sbjct 620971662 AGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCC 620971721
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
||||| || ||||||||| | || | | ||||| ||||| ||||| ||||| |||||
Sbjct 620971722 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 620971781
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | ||| || ||| | || | |||||||| || || ||||| || || ||
Sbjct 620971782 TGGATCTTTGCCTTCACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGTGTGATGGTC 620971841
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || | ||| || || || ||||||||
Sbjct 620971842 TTGCCGGTAAGGGTCTTCACGAAGATCTGCAT 620971873
Score = 118 bits (130), Expect = 8e-22
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| ||||||| || || || || || |||||||| || ||||| || | |||||| |
Sbjct 643860042 CGGAGCACCAGGTGCAGAGTAGACTCCTTTTGAATATTGTAATCAGCCAAAGTGCGACCA 643860101
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| || || ||||| | |||| | ||||| ||||| ||||||||||| |||
Sbjct 643860102 TCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTG 643860161
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || || || | || | ||||| ||| || ||||| | || |||
Sbjct 643860162 TCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCCGAAGACTCCACTTCCAAGGTGATA 643860221
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||||||| | ||| || ||||| ||||||||
Sbjct 643860222 GTCTTGCCAGTAAGGGTCTTGACAAAAATCTGCAT 643860256
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||| ||||| ||||| || || || ||||| || ||||| | ||||||
Sbjct 620970908 ACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCC 620970967
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || |||||| | |||| | ||||| ||||| || || ||||| ||
Sbjct 620970968 ATCCTCAAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTT 620971027
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || || || | || | |||||||| || || || || || ||
Sbjct 620971028 GTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCAGATGACTCCACCTCCAGGGTGAT 620971087
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || | ||| || ||||||||||||||
Sbjct 620971088 GGTCTTGCCCGTGAGGGTCTTCACAAATATCTGCAT 620971123
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||||| ||| || ||||| || || || || || ||||| |||| || || |||
Sbjct 655250040 AGCACCAGATGGAGTGTGGACTCCTTCTGGATATTGTAATCAGCAAGCGTCCGGCCATCC 655250099
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
||||| |||||||||||| | || | | ||||| || ||||| || ||||| |||||
Sbjct 655250100 TCGAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCC 655250159
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | ||| |||||| | || | |||||||| || || ||||| || || ||
Sbjct 655250160 TGGATCTTTGCCTTGACATTGTCAATTGTGTCAGAGGACTCGACCTCAAGTGTGATGGTC 655250219
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || | || || ||||| ||||||||
Sbjct 655250220 TTCCCGGTGAGAGTCTTCACAAAGATCTGCAT 655250251
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||| ||||| ||||| || || || ||||| || ||||| | ||||||
Sbjct 621203587 ACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAAGGTGCGGCC 621203646
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || || ||| | || | | ||||| ||||| || || ||||| ||
Sbjct 621203647 ATCCTCAAGCTGCTTACCGGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTT 621203706
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || || || | || | |||||||| || || || || || ||
Sbjct 621203707 GTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCAGACGACTCCACCTCCAGGGTGAT 621203766
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||||||| | ||| || ||||||||||||||
Sbjct 621203767 GGTCTTGCCAGTGAGGGTCTTCACAAATATCTGCAT 621203802
Score = 107 bits (118), Expect = 1e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| ||||||| ||| | |||||||| || || || || ||||| |||| |||| | |
Sbjct 638077079 CGGAGCACCAGATGCAATGTGGATTCCTTCTGGATATTGTAATCAGCAAGGGTGTGTCCA 638077020
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || ||||| ||| | ||||| | ||||| ||||| || | ||||| ||
Sbjct 638077019 TCCTCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCCGGGGGGGTGCCCTCCTTA 638076960
Query 29692 TCTTGTAATTTTTGTT-TGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| || ||| || | | ||| | || | ||||| ||| || || || || || ||
Sbjct 638076959 TCCTG-AATCTTCGCCGTCACATTGTCGATTGTGTCTGAAGACTCAACCTCCAGGGTAAT 638076901
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || ||||| || ||||||||||||||
Sbjct 638076900 GGTCTTGCCGGTCAAGGTCTTGACAAATATCTGCAT 638076865
Score = 91.5 bits (100), Expect = 1e-13
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| ||||| | | ||| |||||||| ||||| || ||||| |||||||| ||||| ||
Sbjct 689731217 TCCACCCCTGAGCCTCAGGACCAAATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGC 689731158
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| || || ||| || | || || |||||| | || | ||||||||||| || ||
Sbjct 689731157 TAATGTTCGCCCATCTTCCAACTGCTTTCCAGCAAAAATTAGCCTTTGCTGATCTGGGGG 689731098
Query 29679 AATACCCTCTTTGTCTTG 29696
||| ||||| ||||| ||
Sbjct 689731097 AATGCCCTCCTTGTCCTG 689731080
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||| | || || ||||| || || || ||||| || || || | ||||| |||
Sbjct 620715572 AGCACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGCGTGCGGCCATCC 620715631
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
||||| || |||||||| | || | | ||||||||||| || || ||||| |||||
Sbjct 620715632 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCCTCCTTGTCC 620715691
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | || ||||| | || | ||||| || || || || || || || ||
Sbjct 620715692 TGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAGGACTCAACCTCCAGGGTGATGGTC 620715751
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || | ||| || ||||| ||||||||
Sbjct 620715752 TTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 620715783
Score = 84.2 bits (92), Expect = 2e-11
Identities = 120/169 (71%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 29618 CAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCG 29677
||| |||||| ||| || || || ||||| ||| | || | | ||||||||||| |
Sbjct 621204536 CAAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCCGGTG 621204595
Query 29678 GAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737
| |||||||| ||||| || | || || ||| | || | ||||| || || |
Sbjct 621204596 GGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCCGAGGACTCAA 621204655
Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || || || || |||||||| | ||| || ||||||||||||||
Sbjct 621204656 CCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAATATCTGCAT 621204704
>seq11
Length=621432051
Score = 131 bits (144), Expect = 1e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
||||| || | |||||| |||||||||||||| ||||||||||| || | ||| || |
Sbjct 492790279 CGCAGGACAAGATGAAGAGTGGATTCTTTTTGGATGTTATAATCTGCCAAGGTACGCCCA 492790338
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || ||||| || || ||| | || | || |||||||| || ||||| ||||| |||
Sbjct 492790339 TCCTCCAGTTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAGGAATTCCCTCCTTG 492790398
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || || ||| | || | ||||| || || || |||||||| ||
Sbjct 492790399 TCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCCACCTCAAGAGTGATG 492790458
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || |||||||| || || ||||| ||||| ||
Sbjct 492790459 GTCTTTCCAGTTAATGTCTTGACAAAAATCTGTAT 492790493
Score = 100 bits (110), Expect = 2e-16
Identities = 150/212 (71%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|| |||| ||||| || || || || ||||| || ||||| || | ||||| |||
Sbjct 492790738 AGGACCAGGTGAAGGGTAGACTCCTTCTGAATATTGTAATCTGCCAAAGTGCGCTCATCC 492790797
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
||||| || || |||||| | || | || ||||| || ||||| ||||| ||||| ||
Sbjct 492790798 TCGAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTG-TCAGGCGGGATACCTTCTTTATCC 492790856
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | || || ||| | || | ||||| || || || |||||||| || ||
Sbjct 492790857 TGGATCTTAGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACGTCAAGAGTGATGGTC 492790916
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || |||| || || ||||||||||||||
Sbjct 492790917 TTTCCGGTTAGTGTCTTGACAAATATCTGCAT 492790948
Score = 89.7 bits (98), Expect = 4e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | | ||| ||||||||||| || || |||||||||||||| || || ||
Sbjct 126977310 CCACCCCTGAGCCTCAGGACCAAATGAAGTGTTGACTCTTTTTGAATGTTGTAGTCAGCT 126977251
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| || || || || |||||| | || || |||||||| || |||||
Sbjct 126977250 AATGTCCGTCCATCTTCCAGCTGCTTTCCAGCAAAAATTAACCTTTGCTGGTCTGGCGGG 126977191
Query 29680 ATACCCTCTTTGTCTTG 29696
|| || || ||||| ||
Sbjct 126977190 ATGCCTTCCTTGTCCTG 126977174
>seq2
Length=690537804
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| ||||||| ||||||||||| || || || ||||| || || || | ||||||
Sbjct 654623986 CGGAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCG 654624045
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| || ||||| || | || | | ||||| |||||||| || ||||| |||
Sbjct 654624046 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTG 654624105
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || || || | || | ||||| || || || || || || ||
Sbjct 654624106 TCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATG 654624165
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || | ||| || || || ||||||||
Sbjct 654624166 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 654624200
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| ||||||| ||||||||||| || || || ||||| || || || | ||||||
Sbjct 654627031 CGGAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCG 654627090
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| || ||||| || | || | | ||||| |||||||| || ||||| |||
Sbjct 654627091 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTG 654627150
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || || || | || | ||||| || || || || || || ||
Sbjct 654627151 TCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATG 654627210
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || | ||| || || || ||||||||
Sbjct 654627211 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 654627245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 384519036897894
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |