Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_023549.1
Length=56789
Score E
Sequences producing significant alignments: (Bits) Value
seq10 86.0 2e-12
seq7 86.0 2e-12
seq4 86.0 2e-12
seq3 86.0 2e-12
seq9 80.6 1e-10
>seq10
Length=712180895
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 121669721 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 121669662
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 121669661 GCTCTACTCCGC 121669650
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 692363772 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTTGTGAGCTACCAAACT 692363713
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 692363712 GCTCTACTCCGC 692363701
>seq7
Length=726427787
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 657757276 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 657757217
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 657757216 GCTCTACTCCGC 657757205
>seq4
Length=803365466
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 574008106 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 574008165
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 574008166 GCTCTACTCCGC 574008177
>seq3
Length=775183943
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 391371112 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 391371053
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 391371052 GCTCTACTCCGC 391371041
>seq9
Length=700855599
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 227033999 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 227034058
Query 50172 GCTCTACTCCGC 50183
|||||||||||
Sbjct 227034059 ACTCTACTCCGC 227034070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181281586861908
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |