Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq129631 134 2e-26 >seq129631 Length=630463 Score = 134 bits (148), Expect = 2e-26 Identities = 238/347 (69%), Gaps = 0/347 (0%) Strand=Plus/Plus Query 71371 TTCGAAAAGCTGATTGAGAAACAACTTTCATTCTTCTGGCGACCTGAAGAGGTGGATGTT 71430 || ||||| || ||||| |||||||||||||| || ||| |||| ||||| | ||| | Sbjct 524287 TTTGAAAAACTAATTGAAAAACAACTTTCATTTTTTTGGAGACCAGAAGAAATAGATTTA 524346 Query 71431 TCGCAAGACCGTATCGACTTCCAGGGGTTGCCAGATCATGAAAAACACATCTTCGTTTCT 71490 || |||| | || || || || || || | | |||||||| || || | | Sbjct 524347 TCTAAAGATAGAATAGATTTTCAAAATTTACCTTCTAACGAAAAACATATTTTTATAAGT 524406 Query 71491 AACCTGAAATACCAAACCCTGCTGGACTCGATTCAGGGTCGTAGCCCGAACGTGGCCTTG 71550 || | ||||| ||||| | || || || ||||| || | || || ||| | || || Sbjct 524407 AATTTAAAATATCAAACTTTACTTGATTCTATTCAAGGAAGAAGTCCTAACATCGCTTTT 524466 Query 71551 CTGCCGATCTGTTCTATCCCGGAACTCGAAACCTGGATTGAAACCTGGGCGTTCTCTGAA 71610 | || || |||||| || ||| | ||||| ||||||||||| ||| | || || || Sbjct 524467 TTACCTATAGTTTCTATTCCCGAATTAGAAACATGGATTGAAACATGGTCTTTTTCAGAG 524526 Query 71611 ACGATTCACTCGCGCTCATACACCCACATCATCCGTAATATCTTTACTGACCCCTCCATC 71670 || ||||| || || ||||| || || || || | ||||| ||| | | || || || Sbjct 524527 ACAATTCATTCACGTTCATATACACATATAATTAGAAATATTATTAATCATCCATCTGTC 524586 Query 71671 GTGTTTGATGACATCGTGACCAACGAACACATCAAAGCGCGTGCTGA 71717 || |||||||| || | | || || |||| || | ||||| || Sbjct 524587 GTATTTGATGATATTATTTCTAATAAAAACATTAATGATCGTGCAGA 524633 Score = 86.0 bits (94), Expect = 1e-11 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 165188 TATTGGTCTATAGTTCAGTCGGTAGAACAGCGGACTGTTAATCCGTAGGTCGCTGGTTCG 165247 |||| ||| ||||||||| |||||||| |||||||||||||||||| ||| |||||||| Sbjct 130279 TATTCCTCTGTAGTTCAGTTGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCG 130338 Query 165248 AATCCAG 165254 | ||||| Sbjct 130339 AGTCCAG 130345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 865723924964160