Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_023561.1
Length=173276
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 152 6e-32
>seq129631
Length=630463
Score = 152 bits (168), Expect = 6e-32
Identities = 303/447 (68%), Gaps = 20/447 (4%)
Strand=Plus/Minus
Query 145943 TTGATTTGAACACCGTAATCCAAGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTTC 146002
|| ||||| ||| | ||||| | ||||| | || ||||| || | ||| | || ||
Sbjct 522615 TTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATTT 522556
Query 146003 TTGAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAATGTCGCCGCG 146062
|| | || | | ||||||| ||| | ||||| ||||| || | | || || ||
Sbjct 522555 TTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGCC 522496
Query 146063 CCACCGCGAACTCCACCTTGGGAGCAAGACTTAACTGCTGTTTGGATGTGTTTCCAGAAA 146122
|| || | |||||||||||| || ||||| || ||||| |||||| |||||| | |||
Sbjct 522495 CCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAAAAA 522436
Query 146123 GGAATAACTCCAGTATGCTTGACTTCTCCGAAGCCGATTTTTGA----ACCTTCT---GC 146175
|||||| ||| ||||| ||||||| |||| ||| || | || ||
Sbjct 522435 GGAATACATCCGGTATGAAATGCTTCTCC-------ATTTCTGATAGGACTTCCTAAAGC 522383
Query 146176 ACGAATCATACCTGCGTTAATGCCGATACCAGCACGTTTAGAGATGTACTCTACAATTGA 146235
||||| ||| ||||||||||| || || || |||| ||| | || | ||||||||
Sbjct 522382 TCGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTG- 522324
Query 146236 TTCAGCAGATTT---GTTAATTGATTTCAGTGAATCACCAGCTTCAATAACAACGCAAGA 146292
|| || | | ||||| || || | ||| || |||||| | || |||||
Sbjct 522323 --CACTAGTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGA 522266
Query 146293 ACTGAATTGACGAGTAGGAGTACGAGCACCTGCCATAATAGGAGTAGGCAGAGAAATTTT 146352
||| ||||||||||| || || | | |||| |||||| || || || ||||| |||||
Sbjct 522265 ACTAAATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTT 522206
Query 146353 CTTAGTTGACACAGCATCGTAAAAACG 146379
||| || | |||| ||||| ||
Sbjct 522205 AAAAGTGGAAATTGCATTATAAAAGCG 522179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 553321784895040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |