Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_023568.1
Length=246964
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 149 1e-30
>seq129631
Length=630463
Score = 149 bits (164), Expect = 1e-30
Identities = 294/426 (69%), Gaps = 12/426 (3%)
Strand=Plus/Plus
Query 78627 CTTCTACAATGCAGTTTCGACTCACAAACTTTCATTACCGACACCGATTATGGCAGGCGT 78686
||| || |||||| |||| ||| ||| | || |||| |||||||||||| |||| ||
Sbjct 522181 CTTTTATAATGCAATTTCCACTTTTAAAATATCTCTACCCACACCGATTATGTCAGGAGT 522240
Query 78687 TCGTACCCCGACACGCCAGTTTAGTTC--GTGTGTTAAGATTGAATCAGGCGACTCTTTG 78744
| || || || || || |||||||| |||||||| ||||||| | || |||
Sbjct 522241 AAGAACACCAACTCGTCAATTTAGTTCTTGTGTGTTA--ATTGAATGTGCAGATAATTTA 522298
Query 78745 CATTCAATCAATGAAGTGGCTAAATCAATTGTAAGTTACATTAGTAAGCGTGCAGGTATC 78804
| || || |||| ||| ||||||||| || || | | || ||||| ||
Sbjct 522299 AACTCTATTAATGCTACAACTAGTGCAATTGTAAAATATGTTTCTCAACGAGCAGGAATA 522358
Query 78805 GGTGTTAACGGCGGTGCGATTCGTGCTGAAGGGGCAGTCGT-TCGTTCAGGTGAGATTC- 78862
|| |||||| ||| ||||| ||| | || |||| | || | | |||| |
Sbjct 522359 GGCATTAACGCTGGTCAAATTCGAGCTTTA--GGAAGTCCTATCAGAAATG-GAGAAGCA 522415
Query 78863 -GTCACACTGG-TGTAATTCCATTCTGGAAACACTTTCAAACTGCGGTTAAATCGTGTTC 78920
||| || || ||| ||||| || | |||||||| |||| || || ||||| |||||
Sbjct 522416 TTTCATACCGGATGT-ATTCCTTTTTATAAACACTTCCAAAGCGCAGTAAAATCTTGTTC 522474
Query 78921 TCAAGGTGGTGTACGTGGGGGTGCTGCGACTCTAACTTACCCGATTTGGCACTTAGAAGT 78980
||||||||| || | || || || || ||| | |||||| || ||||| ||||| |
Sbjct 522475 TCAAGGTGGAGTTAGAGGAGGGGCCGCAACTGTTTTTTACCCAATATGGCATCTAGAAAT 522534
Query 78981 TGAAAAACTGTTAGTTCTGAAGAACAACAAAGGTGTTGAAGAAAACCGTATTCGTCATCT 79040
|||||| | |||||| | || || || | ||| |||||||||| | | ||||||||
Sbjct 522535 TGAAAATTTATTAGTTTTAAAAAATAATAGAGGAATTGAAGAAAATAGAGTACGTCATCT 522594
Query 79041 TGACTA 79046
||| ||
Sbjct 522595 TGATTA 522600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 788683809447360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |