Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq129631 131 1e-24 seq10 122 6e-22 seq9 118 8e-21 seq7 116 3e-20 seq8 114 1e-19 seq11 107 1e-17 seq12 95.1 9e-14 seq4 91.5 1e-12 seq1 86.0 5e-11 >seq129631 Length=630463 Score = 131 bits (144), Expect = 1e-24 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393 |||||| | |||||| |||| || ||||| || ||||| ||||||||||| || | Sbjct 551629 TTTATCTAAACCATAAGCAAGCGCTGCAGCTGTAGGTTCGTTAATAATTCTTTTGACTTC 551570 Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 | || |||||||| || ||||| ||||| |||||||| || | ||| |||||||| || Sbjct 551569 TAATCCTGCAATTCTACCAGCATCCTTAGTTGCTTGTCTCTGAGCATCATTAAAATAGGC 551510 Query 282454 AGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTT 282513 |||||| |||||||| || ||| | ||| || ||| | || | ||| |||| ||| Sbjct 551509 AGGAACTGTAATAACTGCTTCTTTCACTGATTCTCCTAAGTAGTCTTCTGCAGTTTTTTT 551450 Query 282514 CATTTTACTTAAAATCATTGATGAAATTTG 282543 |||||| |||| | || |||||||| Sbjct 551449 CATTTTTTTTAACACTTCTGCAGAAATTTG 551420 Score = 118 bits (130), Expect = 8e-21 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 86114 CTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAAC 86173 ||||||| || ||||| ||||| || || ||||| ||||| ||| | || ||||| | Sbjct 551624 CTAAACCATAAGCAAGCGCTGCAGCTGTAGGTTCGTTAATAATTCTTTTGACTTCTAATC 551565 Query 86174 CCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTA 86233 | |||||| || ||| ||| ||||||||||||||| || ||||||||||| || || | Sbjct 551564 CTGCAATTCTACCAGCATCCTTAGTTGCTTGTCTCTGAGCATCATTAAAATAGGCAGGAA 551505 Query 86234 CAGTAATAACTGCTT 86248 | ||||||||||||| Sbjct 551504 CTGTAATAACTGCTT 551490 Score = 104 bits (114), Expect = 2e-16 Identities = 303/458 (66%), Gaps = 24/458 (5%) Strand=Plus/Minus Query 281385 TAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATTAAGAA 281441 |||||||||| || ||| || ||| ||| |||||| |||| |||| | | Sbjct 552584 TAATAGTAATTTT-TTG--TTCCTTTCCAGTTTTTTTATCTTTTGCAGATACATGTAATA 552528 Query 281442 TACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTG 281501 |||||| || ||| | ||||||||| ||||||||||| | ||||| | || || Sbjct 552527 TACCATCGGAATCAATATCAAATGTAACTTCAATTTGTGCTGTTCCTCTTGGTGCTGGCT 552468 Query 281502 GGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTG--AATTTTCGTTC 281559 || || || | ||||||| || ||| || ||||| ||||| ||||| ||| Sbjct 552467 CAATTCCGTCTAGATTAAATTGACCTAGAGATTTGTTATC--TAGTGCTCTTTTTCTTTC 552410 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 ||| | | ||| || || || || | | |||||||||| |||| ||| ||| | Sbjct 552409 ACCTTGAAGAATATGTATTGTTACAGCGGATTGATTATCTTCTGCTGTTGAAAAAACT-T 552351 Query 281620 GGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAG 281678 | | | |||| |||||| ||||||||| ||| || | ||||| ||||| || Sbjct 552350 GACTATGTTTAGTAGGAATAGTTGTGTTTTTATTTATCAGTGAAGTCATTATACCCCCCA 552291 Query 281679 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 281738 || || | || | || | ||||| ||||||| | | || || || || Sbjct 552290 TAGTCTCAATTCCTAATGACAATGGAGTTACATCAAGCAATAAAACATCTTTAA------ 552237 Query 281739 CATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 281798 |||| | ||| ||| | | || |||||| ||||||||| |||||| ||||||| Sbjct 552236 CATC-GCCTGA-----AAGTACACCTCCTTGAACTGCAGCACCAACTGCAACCGCTTCAT 552183 Query 281799 CAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 | ||||||||| || | ||| ||||||| |||| Sbjct 552182 CTGGATTAACATCTTTTCTAGGTTCTTTACCAAAGAAA 552145 >seq10 Length=712180895 Score = 122 bits (134), Expect = 6e-22 Identities = 305/462 (66%), Gaps = 6/462 (1%) Strand=Plus/Minus Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077 |||||| ||| ||||| | ||||| | ||||| || ||||| | | ||||| || | Sbjct 660586230 AATCAACTCCCTCGAAGAGTGAATCGATCTCAATGGTGGTTTGGGCAGTGGAAGAAAGGG 660586171 Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCA 282137 | || || | ||||| | ||||| || |||| || | | | | | | | Sbjct 660586170 TCCTCTTCGCCCTCTCACAAGAAGTCCTGAGCCTTCTCAAAGACCTGGGGTTTCCACTGA 660586111 Query 282138 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 282197 ||| | || | || |||||||| |||| ||| | | || | ||| || |||| Sbjct 660586110 TATCCTTCTTGTGCTTCCTCTTGAACTCTTGGACAAAGTGGTTCACCATACGGTTGTCAA 660586051 Query 282198 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 282257 | || || || || | | ||| | || | ||| || | || | |||| || || | Sbjct 660586050 AGTCCTCCCCACCAAGGTGAGTGTCACCAGCCGTGGCCTTCACCTCAAAAATACCCTCCT 660585991 Query 282258 CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 282317 ||| | | |||| |||||| || |||||||| | ||||| ||||| |||||| Sbjct 660585990 CAATGGCAAGGAGAGAGACATCAAAAGTGCCACCACCAAGGTCAAAGATAAGCACATTCT 660585931 Query 282318 TTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371 | || | | |||| | || ||||||||||| |||| ||||| || ||||| | Sbjct 660585930 TCTCACCGACGCTGGTAGCCTTCTTGTCAAGACCATAAGCAATTGCAGCTGCTGTTGGCT 660585871 Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 282431 | || || || | || ||||||||||||||||| || ||||| || || || || | Sbjct 660585870 CGTTGATGATACGCATCACATTAAGACCAGCAATAACACCGGCATCCTTGGTTGCCTGCC 660585811 Query 282432 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 | || ||||| || || || ||||| || || | ||| |||| Sbjct 660585810 TCTGGGAATCATTGAAGTAAGCAGGCACGGTGACAACAGCAT 660585769 Score = 111 bits (122), Expect = 1e-18 Identities = 533/829 (64%), Gaps = 30/829 (4%) Strand=Plus/Plus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | ||| |||||||| || | |||||||||||||||||||||||| | || | Sbjct 116644261 GTCATCACACCCCCAGCTGTCTCCAGACCAAGAGAAAGAGGAGTGACATCCAATAACAGC 116644320 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACC 281781 | | || | || || | | || ||||| | || || || | |||||| || Sbjct 116644321 AGGTCCTGGACCTTCTCGTTGCCCTCTCCGCTCAAGA-TGGCAGCCTGGACAGCAGCCCC 116644379 Query 281782 ATATGCAACAGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAA 281839 || |||||||| |||||||| || | | || || || | || || ||||| || Sbjct 116644380 GTAGGCAACAGCCTCATCAGGGTTGATGCTCTTGCAC--AGCTCCTTGCCGTTGAAGAAG 116644437 Query 281840 TTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 281899 | ||||| || || || ||||| | || || || ||||| | |||| || Sbjct 116644438 TCCTGGAGAAGCTGCTGCACTTTGGGAATCCTAGTGGAACCACCAACAAGGACAACATCG 116644497 Query 281900 TGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 281958 ||||| ||| | || |||| |||| |||| | | || || || || || | || Sbjct 116644498 TGCACG-GTGCTCTTGTCCATCTTTGCATCCCTGAGACACTTCTCCACAGGCTCCATACA 116644556 Query 281959 AGCTCTAAACAAGTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTA 282016 || |||| || || || || || || | || | || | ||| | || Sbjct 116644557 CTTCCTGAACAGATCCATGTTCATC--TCCTCAAACCTGGCCCGGGTGATGGTGG-AGTA 116644613 Query 282017 TAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG---AGTCGAAGAAGA 282072 || ||||| || || |||| || |||| ||||| || || || ||| || || || Sbjct 116644614 GAAGTCAATGCCCTCAAACAGCGAGTCAATCTCAATGGTGGTCTGTGCAGTGGAGGA-GA 116644672 Query 282073 TAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG 282132 ||| | | || || | ||||| | |||||| || || || | ||| | | | ||| Sbjct 116644673 GAGTCCTCTTT--GCCCTCTCACAGGATGTCCTCAGCCTCCGAAGAGCTCTCG--GGTTG 116644728 Query 282133 --ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGA 282190 | | | || | || | || |||||||| || | || | | || | | Sbjct 116644729 CCACTGATGTCCTTCTTGTTCTTCCTCTTGAACTCCTGGACGAAGTGGTTGACCATCCTG 116644788 Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 |||||||| || ||||| || | | ||| | || | || ||| | || | || | Sbjct 116644789 TTATCAAAGTCCTCACCACCAAGATGAGTGTCACCAGCTGTGGCTTTAACCTCAAAGATG 116644848 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || || |||| | | ||||| |||||| ||| ||||| || | |||||| || || Sbjct 116644849 CCCTCCTCAATGGTGAGAAGAGAGACATCAAAGGTACCACCTCCAAGATCAAAGATGAGG 116644908 Query 282311 ACATTCATTTCTTTGTCT-TGG-----TTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 |||||| | || | ||| || || ||||||||||| |||| |||||||| Sbjct 116644909 ACATTCTTCTCACCAACACTGGAAGCCTTCTTGTCAAGACCATAAGCAATGGCAGCAGCT 116644968 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 ||||| || || || || | | ||||| | |||||||| || ||||| || || Sbjct 116644969 GTTGGCTCGTTGATGATACGAAGGACATTGATGCCAGCAATGACACCAGCATCCTTGGTA 116645028 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 || || || || || || || || |||||||| ||||| | ||| |||| Sbjct 116645029 GCCTGCCTCTGCGAGTCATTGAAGTATGCAGGTACAGTGACAACAGCAT 116645077 Score = 87.8 bits (96), Expect = 1e-11 Identities = 142/203 (70%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 |||||| || || ||||||| ||||| | || | || |||| |||| || | Sbjct 192542969 ACATCAAAAGTACCGCCACCCAAGTCAAACACTAGAA---TCGTTTCGTTGTTTT---TC 192542916 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 || |||| |||||| |||| || ||||||||||| ||||| ||||| | | ||| | Sbjct 192542915 TTCTCAAAACCATAAGCAAGAGATGCAGCAGTTGGCTCATTTATAATGCGGAGAACTTCC 192542856 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 || || ||||| | || ||||| || || ||| ||| || || || || || || || Sbjct 192542855 AGCCCTGCAATACGGCCAGCATCCTTTGTTGCTGTTCTCTGCGAGTCATTGAAGTACGCT 192542796 Query 282455 GGAACAGTAATAACGGCATCTGT 282477 ||||| |||| || || | ||| Sbjct 192542795 GGAACGGTAACCACCGCTTTTGT 192542773 >seq9 Length=700855599 Score = 118 bits (130), Expect = 8e-21 Identities = 304/462 (66%), Gaps = 6/462 (1%) Strand=Plus/Minus Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077 |||||| ||| ||||| | ||||||| || || || ||||| | | ||||| || | Sbjct 644718427 AATCAACTCCCTCGAAGAGTGAATCAATCTCGATGGTGGTTTGGGCAGTGGAAGAAAGGG 644718368 Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCA 282137 | || || | ||||||| ||||| || || | || | | | | | | | Sbjct 644718367 TCCTCTTCGCCCTCTCACATGAAGTCCTGAGCCTCCTCAAAGACCTGGGGTTTCCACTGA 644718308 Query 282138 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 282197 ||| | || | || |||||||| |||| ||| | | || | ||| || |||| Sbjct 644718307 TATCCTTCTTGTGCTTCCTCTTGAACTCTTGGACAAAGTGGTTCACCATACGGTTGTCAA 644718248 Query 282198 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 282257 | || || || || | | ||| | || | || || | || | |||| || || | Sbjct 644718247 AGTCCTCCCCACCAAGGTGAGTGTCACCAGCTGTGGCCTTGACCTCAAAAATACCCTCCT 644718188 Query 282258 CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 282317 ||| | | |||| |||||| || |||||||| | ||||| ||||| || ||| Sbjct 644718187 CAATGGTAAGGAGAGAGACATCAAAAGTGCCACCACCGAGGTCAAAGATAAGCACGTTCT 644718128 Query 282318 TTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371 | || | | |||| | || ||||||||||| |||| ||||| || ||||| | Sbjct 644718127 TCTCACCGACACTGGTAGCCTTCTTGTCAAGACCATAGGCAATTGCAGCTGCTGTTGGCT 644718068 Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 282431 | || || || | || ||||||||||||||||| || ||||| || || || || | Sbjct 644718067 CGTTGATGATACGCATCACATTAAGACCAGCAATAACACCAGCATCCTTGGTTGCCTGCC 644718008 Query 282432 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 | || ||||| || || || ||||| ||||| | ||| |||| Sbjct 644718007 TCTGGGAATCATTGAAGTAAGCAGGCACAGTGACAACAGCAT 644717966 Score = 98.7 bits (108), Expect = 7e-15 Identities = 196/289 (68%), Gaps = 6/289 (2%) Strand=Plus/Plus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || ||||| || ||||| || | | ||| | || | || ||| | || | || | Sbjct 103793275 TTGTCAAAGTCCTCACCACCAAGATGAGTGTCACCAGCTGTGGCTTTAACCTCAAAGATA 103793334 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || || |||| | | ||||| |||||| ||| ||||| || | |||||| || || Sbjct 103793335 CCCTCCTCAATGGTGAGAAGAGAGACATCAAAGGTACCACCTCCAAGATCAAAGATGAGG 103793394 Query 282311 ACATTCATTTCTTTGTCT-TGG-----TTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 |||||| | || | ||| || || ||||||||||| |||| |||||||| Sbjct 103793395 ACATTCTTCTCACCAACACTGGAAGCCTTCTTGTCAAGACCATAAGCAATGGCAGCAGCT 103793454 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 ||||| || || || || | | ||||| | |||||||| || ||||| || || Sbjct 103793455 GTTGGCTCGTTGATGATACGAAGGACATTGATGCCAGCAATGACACCAGCATCCTTGGTA 103793514 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 || || || || || || || || |||||||| ||||| | ||| |||| Sbjct 103793515 GCCTGCCTCTGCGAGTCATTGAAGTATGCAGGTACAGTGACAACAGCAT 103793563 Score = 93.3 bits (102), Expect = 3e-13 Identities = 143/203 (70%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 |||||| || || ||||||| ||||| | || | || |||| |||| || | Sbjct 172664565 ACATCAAAAGTACCGCCACCCAAGTCAAACACTAGAA---TCGTTTCATTGTTTT---TC 172664512 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 || |||| |||||| |||| || ||||||||||| ||||| ||||| | || ||| | Sbjct 172664511 TTCTCAAAACCATAAGCAAGAGATGCAGCAGTTGGCTCATTTATAATGCGCAGAACTTCC 172664452 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 || || ||||| | || ||||| || || ||| ||| || || || || || || || Sbjct 172664451 AGCCCTGCAATACGGCCAGCATCCTTTGTTGCTGTTCTCTGCGAGTCATTGAAGTACGCT 172664392 Query 282455 GGAACAGTAATAACGGCATCTGT 282477 ||||| |||| || || | ||| Sbjct 172664391 GGAACGGTAACCACCGCTTTTGT 172664369 >seq7 Length=726427787 Score = 116 bits (128), Expect = 3e-20 Identities = 150/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCT----T 282329 ||||||| ||| |||||||| | ||||| || || |||||| | || | | Sbjct 441266755 AACATCAAAGGTGCCACCACCAAGGTCAAAGATGAGAACATTCTTCTCACCAACACTGGT 441266696 Query 282330 GG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 282387 || || |||||||||||||| |||| |||||||||| |||| || || ||||| | || Sbjct 441266695 GGCCTTCTTATCAAGACCATAAGCAATAGCAGCAGCAATTGGCTCGTTGATAATGCGCAT 441266636 Query 282388 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 282447 |||||| || || ||||| ||| ||||| || ||||| || || | || || || || Sbjct 441266635 AACATTCAGGCCTGCAATCACTCCAGCATCCTTGGTGGCCTGCCTCTAAGAGTCATTGAA 441266576 Query 282448 ATATGCAGGAACAGTAATAACGGCAT 282473 || ||||| ||||| | ||| |||| Sbjct 441266575 GTAGGCAGGGACAGTGACAACAGCAT 441266550 >seq8 Length=673896466 Score = 114 bits (126), Expect = 1e-19 Identities = 547/855 (64%), Gaps = 22/855 (3%) Strand=Plus/Plus Query 281633 GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCA 281692 || || || ||||| || ||| | | |||||| | ||| ||||| || || | |||| Sbjct 185072558 GGGATGGTGGTGTTCCTTGGAATCAAAACGGTCATGACACCTCCAGCAGTCTCCAGACCA 185072617 Query 281693 AGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCA 281752 ||||||||||| |||||||||| || | | | || | || || | | ||| Sbjct 185072618 AGAGAAAGAGGCGTGACATCAAGCAGCAGGAGGTCCTGGACCTTCTCGTTGCCCTCTCCA 185072677 Query 281753 A-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGT 281811 ||||| | ||||| || | ||||||||||| |||||||| ||||| || || | | Sbjct 185072678 CTCAAGA-TGGCTGCCTGGACTGCAGCACCATAGGCAACAGCCTCATCCGGGTTGATGTT 185072736 Query 281812 TTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACG 281871 | || | || |||||||| || | ||| || || ||| | || || | Sbjct 185072737 CTTGCACAGCTCCTTGCCATTGAAGAAGTCCTGAAGCAGCTGCTGCACCCTTGGGATCCT 185072796 Query 281872 AGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAATCCA 281930 | || || ||||| | |||| ||||| || ||| | || |||| || | |||| Sbjct 185072797 GGTGGAGCCACCAACAAGGACAACATCATGGACA-GTGCTCTTGTCCATCTTAGCATCCC 185072855 Query 281931 ATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTC--TGAACAAAGTTCTTC 281988 | || ||||| || || | | || || | ||| || ||| || || Sbjct 185072856 TCAGGCACTTCTCAACAGGCTCCATGCACTTCCTGAAGAGGTCCATGTTCAAC--TCCTC 185072913 Query 281989 GAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACT 282046 || | || | || | || | | || || || || || || |||| || |||| Sbjct 185072914 AAACCTGGCACGGGTGATGGT--CGTGTAGAAGTCGATGCCCTCATACAACGAGTCAATC 185072971 Query 282047 TCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTT 282106 ||||| || || || | | || || || | | || || || ||||| |||||||| Sbjct 185072972 TCAATGGTGGTCTGCGCAGTGGAGGAGAGGGTCCTCTTCGCCCGCTCACAAGCTGTCCTC 185073031 Query 282107 AGTCTTCGTAAGGCTTTTGCTGATTGATTC--AAATCTGTTTTATATTTTCTCTTGAAAT 282164 || || || | || | | ||||| | | ||| | || | || |||||||| | Sbjct 185073032 AGCCTACGGAGAGCCCTGG--GATTGCCGCTGATATCCTTCTTGTTCTTCCTCTTGAATT 185073089 Query 282165 CTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTC 282224 ||| ||| | | || | | || ||||| || ||||| || | | ||| | | Sbjct 185073090 CTTGGACAAAGTGGTTGACCATCCTGTTGTCAAAGTCCTCACCACCAAGGTGAGTGTCAC 185073149 Query 282225 CTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGG 282284 | | || | | || | || | || ||||||| | | ||||| |||||| || Sbjct 185073150 CAGCAGTGGACTTGACCTCAAAGATGCCCTCTTCAATGGTGAGAAGAGAGACATCAAAGG 185073209 Query 282285 TTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCT----TGG--TTTTTAT 282338 | |||||||| | ||||| || || |||||| | || | ||| || || | Sbjct 185073210 TGCCACCACCAAGGTCAAAGATGAGAACATTCTTCTCACCAACACTGGTGGCCTTCTTGT 185073269 Query 282339 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 282398 |||||||||| |||| ||||||||| ||||| || || || || | || |||||| || | Sbjct 185073270 CAAGACCATAAGCAATAGCAGCAGCGGTTGGCTCGTTGATGATGCGCATAACATTTAGGC 185073329 Query 282399 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 282458 | ||||| ||| ||||| || ||||| || || || || || || || || || || | Sbjct 185073330 CTGCAATCACTCCAGCATCCTTGGTGGCCTGCCTCTGGGAGTCATTGAAGTAGGCGGGGA 185073389 Query 282459 CAGTAATAACGGCAT 282473 |||| | || |||| Sbjct 185073390 CAGTGACCACAGCAT 185073404 Score = 86.0 bits (94), Expect = 5e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 282355 AGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGC 282414 ||||||||||||||||||||| || || || |||| ||| |||||||| | || || Sbjct 670853167 AGCAGCAGCAGTTGGTTCATTGATGATCCTTTGGACATCAAGTCCAGCAATACGGCCAGC 670853108 Query 282415 ATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 ||| || ||||| || || || | ||| || || || || ||||| ||||| || || Sbjct 670853107 ATCCTTGGTGGCCTGCCTCTGAGCATCATTGAAGTAAGCTGGAACGGTAATGACAGC 670853051 >seq11 Length=621432051 Score = 107 bits (118), Expect = 1e-17 Identities = 532/829 (64%), Gaps = 30/829 (4%) Strand=Plus/Plus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | ||| || || || || | |||||||||||||||||||||||| | || | Sbjct 570752667 GTCATCACACCCCCGGCCGTCTCCAGACCAAGAGAAAGAGGAGTGACATCCAACAGCAGC 570752726 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACC 281781 | | || | || || | | ||| ||||| | || || || | |||||| || Sbjct 570752727 AGGTCCTGGACCTTCTCGTTGCCCTCTCCACTCAAGA-TGGCAGCCTGGACAGCAGCTCC 570752785 Query 281782 ATATGCAACAGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAA 281839 ||| |||||||| |||||||| || | | || || || | ||| || ||||| || Sbjct 570752786 ATAGGCAACAGCCTCATCAGGGTTGATGCTCTTGCAG--AGCTCTTTGCCGTTGAAGAAG 570752843 Query 281840 TTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 281899 | ||||| || || | ||||| | || || || ||||| | |||| || Sbjct 570752844 TCCTGGAGAAGCTGCTGCACTCTGGGAATCCTAGTGGAACCACCAACAAGGACAACATCG 570752903 Query 281900 TGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 281958 ||||| ||| | || |||| |||| ||| ||| || || || || || | || Sbjct 570752904 TGCACG-GTGCTCTTGTCCATCTTTGCGTCCCTCAAACACTTCTCCACAGGCTCCATACA 570752962 Query 281959 AGCTCTAAACAAGTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTA 282016 || |||| || || || || || || | || | || | ||| | || Sbjct 570752963 CTTCCTGAACAGATCCATGTTCATC--TCCTCAAACCTGGCACGGGTGATGGTGG-AGTA 570753019 Query 282017 TAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG---AGTCGAAGAAGA 282072 || ||||| || || |||| || |||| ||||| || || || ||| || || || Sbjct 570753020 GAAGTCAATGCCCTCAAACAGCGAGTCAATCTCAATGGTGGTCTGGGCAGTGGAGGA-GA 570753078 Query 282073 TAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG 282132 ||| | | || || | ||||| | |||||| || || || | ||| ||| | ||| Sbjct 570753079 GAGTTCTCTTT--GCCCTCTCACAGGATGTCCTCAGCCTCCGCAGAGCTCTTG--GGTTG 570753134 Query 282133 --ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGA 282190 | | | || | || | || |||||||| || | || | | || | | Sbjct 570753135 CCACTGATGTCCTTCTTGTTCTTCCTCTTGAACTCCTGGACGAAGTGGTTGACCATCCTG 570753194 Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || ||||| || ||||| || | | ||| | || | || ||| | || | ||| | Sbjct 570753195 TTGTCAAAGTCCTCACCACCAAGATGAGTGTCACCAGCTGTGGCTTTAACCTCGAAGATA 570753254 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || || |||| | | ||||| |||||| ||| ||||| || | ||||| || || Sbjct 570753255 CCCTCCTCAATGGTGAGAAGAGAGACATCAAAGGTACCACCTCCAAGGTCAAAGATGAGG 570753314 Query 282311 ACATTCATTTCTTTGTCT-TGG-----TTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 || ||| | || | ||| || || ||||||||||| |||| |||||||| Sbjct 570753315 ACGTTCTTCTCACCAACACTGGAAGCCTTCTTGTCAAGACCATAAGCAATGGCAGCAGCT 570753374 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 ||||| || || || || | | ||||| | |||||||| || ||||| || || Sbjct 570753375 GTTGGCTCGTTGATGATACGGAGGACATTGATGCCAGCAATGACACCAGCATCCTTGGTA 570753434 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 || || || || || || || || |||||||| ||||| | ||| |||| Sbjct 570753435 GCCTGCCTCTGCGAGTCATTGAAGTATGCAGGTACAGTGACAACAGCAT 570753483 >seq12 Length=703217322 Score = 95.1 bits (104), Expect = 9e-14 Identities = 195/289 (67%), Gaps = 6/289 (2%) Strand=Plus/Plus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || ||||| || ||||| || | | ||| | || | || ||| | || | ||| | Sbjct 627009528 TTGTCAAAGTCCTCACCACCAAGATGAGTGTCACCAGCTGTGGCTTTAACCTCGAAGATA 627009587 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || || |||| | | ||||| |||||| ||| ||||| || | ||||| || || Sbjct 627009588 CCCTCCTCAATGGTGAGAAGAGAGACATCAAAGGTACCACCTCCAAGGTCAAAGATGAGG 627009647 Query 282311 ACATTCATTTCTTTGTCT-TGG-----TTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 || ||| | || | ||| || || ||||||||||| |||| |||||||| Sbjct 627009648 ACGTTCTTCTCACCAACACTGGAAGCCTTCTTGTCAAGACCATAAGCAATGGCAGCAGCT 627009707 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 ||||| || || || || | | ||||| | |||||||| || ||||| || || Sbjct 627009708 GTTGGCTCGTTGATGATACGGAGGACATTGATGCCAGCAATGACACCAGCATCCTTGGTA 627009767 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 || || || || || || || || |||||||| ||||| | ||| |||| Sbjct 627009768 GCCTGCCTCTGCGAGTCATTGAAGTATGCAGGTACAGTGACAACAGCAT 627009816 >seq4 Length=803365466 Score = 91.5 bits (100), Expect = 1e-12 Identities = 548/861 (64%), Gaps = 34/861 (4%) Strand=Plus/Minus Query 281633 GGAATTGTTGTGTTTCT----ATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAA 281688 || || |||||||| || ||||| | | ||||| | ||| || ||||| || | Sbjct 535551613 GGGATGGTTGTGTTCCTTGGGATCAAGACT----GTCATCACACCCCCGGCTGTCTCCAG 535551558 Query 281689 ACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTG 281748 |||||| ||||||||||||||||| | || | | | || | || || | | Sbjct 535551557 ACCAAGGGAAAGAGGAGTGACATCCAACAGCAGCAGGTCCTGGACCTTCTCGTTGCCCTC 535551498 Query 281749 ACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAA 281807 || ||||| | || || || | ||| || ||||| |||||||| |||||||| || | Sbjct 535551497 TCCGCTCAAGA-TGGCAGCCTGGACAGCTGCTCCATAGGCAACAGCCTCATCAGGGTTGA 535551439 Query 281808 --CAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGG 281865 | || || || | || |||||||| || | ||||| || || | || Sbjct 535551438 TGCTCTTGCAA--AGCTCCTTGCCATTGAAGAAGTCCTGGAGAAGCTGCTGCACTCTGGG 535551381 Query 281866 AATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTG 281924 ||| | || || || ||||| | |||| || ||||| ||| | || |||| |||| Sbjct 535551380 AATCCTAGTGGAACCACCAACAAGGACAACATCGTGCACA-GTGCTCTTGTCCATCTTTG 535551322 Query 281925 AATCCAATAAA-ACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTC--TGAACAAA 281981 ||| ||| |||| | || || | || | | | || |||| || || || Sbjct 535551321 CGTCCCTCAAACACTTCTCCACAGGCTCCATGCACTTC-CTGAACAGATCCATGTTCATC 535551263 Query 281982 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAACAAAGAA 282040 || || || | || | || | ||| | || || ||||| || || |||| || Sbjct 535551262 --TCCTCAAACCTGGCACGGGTGATGGTGG-AGTAGAAGTCAATGCCCTCAAACAGCGAG 535551206 Query 282041 TCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCT 282100 |||| ||||| || || || | | || || || | | || || | ||||| | | Sbjct 535551205 TCAATCTCAATGGTGGTCTGGGCAGTGGAGGAGAGGGTTCTCTTTGCCCTCTCACAGGAT 535551146 Query 282101 GTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTCTCT 282158 ||||| || || || | ||| ||| | ||| | | | || | || | || |||| Sbjct 535551145 GTCCTCAGCCTCCGAAGAGCTCTTG--GGTTGCCACTGATGTCCTTCTTGTTCTTCCTCT 535551088 Query 282159 TGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAG 282218 | || || | ||| | | || | | || ||||| || ||||| || | | || Sbjct 535551087 TAAACTCCTGGACAAAGTGGTTGACCATCCTGTTGTCAAAGTCCTCACCACCAAGATGAG 535551028 Query 282219 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACAT 282278 | | || | || ||| | || | || | || || |||| | | ||||| |||| Sbjct 535551027 TGTCACCAGCTGTGGCTTTGACCTCAAAGATACCCTCCTCAATGGTGAGAAGAGAGACAT 535550968 Query 282279 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCT-TGG-----T 282332 || ||| ||||| || | ||||| || || || ||| | || | ||| | Sbjct 535550967 CAAAGGTACCACCTCCAAGGTCAAAGATGAGGACGTTCTTCTCACCAACACTGGAAGCCT 535550908 Query 282333 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 282392 | || ||||||||||| |||| ||||| || ||||| ||||| || || | | |||| Sbjct 535550907 TCTTGTCAAGACCATAAGCAATGGCAGCGGCTGTTGGCTCATTGATGATACGGAGGACAT 535550848 Query 282393 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 282452 | | |||||||| || ||||| || || || || || || || || || || |||| Sbjct 535550847 TGATGCCAGCAATGACACCAGCATCCTTGGTAGCCTGCCTCTGCGAGTCATTGAAGTATG 535550788 Query 282453 CAGGAACAGTAATAACGGCAT 282473 |||| ||||| | ||| |||| Sbjct 535550787 CAGGTACAGTGACAACAGCAT 535550767 >seq1 Length=593586810 Score = 86.0 bits (94), Expect = 5e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 282355 AGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGC 282414 ||||||||||||||||||||| || || || |||| ||| |||||||| | || || Sbjct 492971009 AGCAGCAGCAGTTGGTTCATTGATGATCCTTTGGACATCAAGCCCAGCAATACGGCCAGC 492971068 Query 282415 ATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 ||| || ||||| || || || | ||| || || || || ||||| ||||| || || Sbjct 492971069 ATCCTTGGTGGCCTGCCTCTGAGCATCATTGAAGTAAGCTGGAACGGTAATGACAGC 492971125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3733308550840284