Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_024125.2 Length=168470 Score E Sequences producing significant alignments: (Bits) Value seq129631 168 7e-37 >seq129631 Length=630463 Score = 168 bits (186), Expect = 7e-37 Identities = 308/450 (68%), Gaps = 6/450 (1%) Strand=Plus/Minus Query 140752 CATCAAATCATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCC 140811 ||| || | ||| | ||| ||| ||||||| | |||||| | | |||||||| | || Sbjct 522625 CATTAATTTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCC 522566 Query 140812 TTTGTTATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 140871 | | |||||||| ||||| | | |||||||| ||| | |||||| || || ||| || | Sbjct 522565 TCTATTATTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAAC 522506 Query 140872 AGTAGCAGCGCCGCCACGAATTCCACCCTGTGAACATGATTTAACAGCAGTCTGAAAATG 140931 ||| || || || || | || |||||| || ||||| ||||| || || | || || || Sbjct 522505 AGTTGCGGCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTG 522446 Query 140932 TTTCCAAAAAGGAATAACACCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTC 140991 ||| ||||||||||| || ||||| | |||| || | | || | ||| Sbjct 522445 TTTATAAAAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAA 522386 Query 140992 AGCACGAATCATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAAT 141051 ||| ||||| |||| ||||||| || ||||| || |||| ||| | ||||| ||||| Sbjct 522385 AGCTCGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAAT 522326 Query 141052 TG---AAGCGGAAGCCTTATTGATAGACTTCAATGAATCTCCTGCCTCAATAACAACACA 141108 || || | ||| ||| ||||| || || |||| | ||||| | ||||| Sbjct 522325 TGCACTAGTTGTAGC---ATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACA 522269 Query 141109 TGAACTAAACTGTCGAGTCGGAGTACGGCAACCAGCCATAATAGGAGTTGGCAATGAAAT 141168 |||||||| || ||||| || || | || | |||||| || || || | || || Sbjct 522268 AGAACTAAATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATAT 522209 Query 141169 CTGTCGAGTAGATACTGCTTCATAAAAACG 141198 | ||| || | ||| | |||||| || Sbjct 522208 TTTAAAAGTGGAAATTGCATTATAAAAGCG 522179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537971254415200