Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq129631 170 5e-38 >seq129631 Length=630463 Score = 170 bits (188), Expect = 5e-38 Identities = 225/312 (72%), Gaps = 0/312 (0%) Strand=Plus/Plus Query 38194 ATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAG 38253 |||||||| ||||||||||| || || ||||||||||||||| | || |||||||| || Sbjct 140652 ATGGCAAGTAGAGGTGTAAATAAAGTAATCTTAATTGGTCACTTAGGCCAAGATCCTGAA 140711 Query 38254 GTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTT 38313 || || ||| | |||| || ||||| | ||| || ||| | ||||| || ||| Sbjct 140712 GTTCGTTATATGCCAAATGGTAATGCAGTAGTAAATATGACACTTGCAACTTCAGAGAAC 140771 Query 38314 TGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTG 38373 ||| ||||| | || || | |||||||||||||| ||||| || | || Sbjct 140772 TGGAAAGATAAAAATACTGGTGAAAATAAAGAGAAAACAGAATGGCATAGAATAGTATTA 140831 Query 38374 TTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATT 38433 ||||| || |||||||| ||||||| ||||| | ||||||| ||||| || |||||| Sbjct 140832 TTTGGAAAATTGGCTGAAATTGCTGGAGAATATTTGAGAAAAGGTTCTCAAGTATATATT 140891 Query 38434 GAAGGCCAGCTTGAAACTAAGAAGTGGCGGGATCAAAGCGGTCAGGACCGATACACAATA 38493 ||||| ||| |||||| || |||| || |||| |||| || || || |||| | Sbjct 140892 GAAGGATCCCTTCAAACTAGAAAATGGCAAGACCAAAATGGTCTTGAACGTTATACAACA 140951 Query 38494 GGCATTGTGGTT 38505 | ||| | ||| Sbjct 140952 GAAATTATAGTT 140963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132663840002148