Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_024369.2
Length=41569
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 170 5e-38
>seq129631
Length=630463
Score = 170 bits (188), Expect = 5e-38
Identities = 225/312 (72%), Gaps = 0/312 (0%)
Strand=Plus/Plus
Query 38194 ATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAG 38253
|||||||| ||||||||||| || || ||||||||||||||| | || |||||||| ||
Sbjct 140652 ATGGCAAGTAGAGGTGTAAATAAAGTAATCTTAATTGGTCACTTAGGCCAAGATCCTGAA 140711
Query 38254 GTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTT 38313
|| || ||| | |||| || ||||| | ||| || ||| | ||||| || |||
Sbjct 140712 GTTCGTTATATGCCAAATGGTAATGCAGTAGTAAATATGACACTTGCAACTTCAGAGAAC 140771
Query 38314 TGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTG 38373
||| ||||| | || || | |||||||||||||| ||||| || | ||
Sbjct 140772 TGGAAAGATAAAAATACTGGTGAAAATAAAGAGAAAACAGAATGGCATAGAATAGTATTA 140831
Query 38374 TTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATT 38433
||||| || |||||||| ||||||| ||||| | ||||||| ||||| || ||||||
Sbjct 140832 TTTGGAAAATTGGCTGAAATTGCTGGAGAATATTTGAGAAAAGGTTCTCAAGTATATATT 140891
Query 38434 GAAGGCCAGCTTGAAACTAAGAAGTGGCGGGATCAAAGCGGTCAGGACCGATACACAATA 38493
||||| ||| |||||| || |||| || |||| |||| || || || |||| |
Sbjct 140892 GAAGGATCCCTTCAAACTAGAAAATGGCAAGACCAAAATGGTCTTGAACGTTATACAACA 140951
Query 38494 GGCATTGTGGTT 38505
| ||| | |||
Sbjct 140952 GAAATTATAGTT 140963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132663840002148
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |