Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_025425.1 Length=163424 Score E Sequences producing significant alignments: (Bits) Value seq129631 156 4e-33 >seq129631 Length=630463 Score = 156 bits (172), Expect = 4e-33 Identities = 299/438 (68%), Gaps = 2/438 (0%) Strand=Plus/Minus Query 135358 TTATTAATCTGTACGCCGTAGTCAAGATGGCGAATGCGGTTATCTTCCACGCCCTTATTG 135417 |||||||| ||||| | || |||||||| || | | || ||||| | || |||| Sbjct 522618 TTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTA 522559 Query 135418 TTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAGAGTCGCC 135477 || ||||| || | | | |||||| |||| |||||| ||||||||| | | ||| || Sbjct 522558 TTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCG 522499 Query 135478 GCCCCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATGTTTCCAG 135537 ||||| || | || || ||||| || || || || || || | || || ||||| | Sbjct 522498 GCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAA 522439 Query 135538 AATGGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGATCCTTCCGCGCGA 135597 || || ||| || |||||| |||| |||| | ||| | |||| || ||| Sbjct 522438 AAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGA 522379 Query 135598 ATCATGCCAGCGTTGATACCGATACCCGCACGCTTGCTAATATACTTGATGATTGCATTT 135657 || |||||||| || || || || || || | || ||| || | |||||| | Sbjct 522378 ATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTA 522319 Query 135658 GCTGTTTCGTTGAT-GCCCTGCAATGAGTCATCACTTTCAATCACCACACACGAACTAAA 135716 | ||| | || || | | ||| | || ||| |||||| | |||||| |||||||| Sbjct 522318 GTTGTAGCATTAATAGAGTTTAAATTA-TCTGCACATTCAATTAACACACAAGAACTAAA 522260 Query 135717 TTGGCGTGTTGGGGTACGCACACCAGCCATAATCGGAGTAGGCAGAGAGATTTGCTTATT 135776 ||| || ||||| || | || || | ||||||||| || || ||||| |||| | | Sbjct 522259 TTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAAGT 522200 Query 135777 CGAAACAGCATTATAAAA 135794 |||| ||||||||||| Sbjct 522199 GGAAATTGCATTATAAAA 522182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521854155621760