Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_025437.1
Length=169062
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 138 1e-27
>seq129631
Length=630463
Score = 138 bits (152), Expect = 1e-27
Identities = 287/425 (68%), Gaps = 12/425 (3%)
Strand=Plus/Minus
Query 142406 TTTTCATCCACGCCTTTGTTATTTTTCAGAACCAACAGGTTCTCTACTTCTAAGTGCCAC 142465
||||| || | ||| | |||||||| | ||| || | || || | ||||| |||||
Sbjct 522579 TTTTCTTCAATTCCTCTATTATTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCAT 522520
Query 142466 ATCGGATAATACGCTGTAGCAGCACCACCACGAATACCACCTTGAGAACAAGATTTTACT 142525
|| || ||| | | || || || || || | || ||||||||||||||||||||||||
Sbjct 522519 ATTGGGTAAAAAACAGTTGCGGCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACT 522460
Query 142526 GCAGTTTGGAAATGTTTCCAGAATGGAATAACACCCGTATGTCGAACTTCACCCATACCA 142585
|| ||||||| ||||| | || |||||| || ||||| |||| || | |
Sbjct 522459 GCGCTTTGGAAGTGTTTATAAAAAGGAATACATCCGGTATGAAATGCTTCTCCATTTC-- 522402
Query 142586 ATCTTAGAACCTTCT---GCACGAAGCATACCAACGTTGATACCGATACCAGCTCGTTTA 142642
| ||| || | || || |||| |||| |||| || || || || ||||||| |
Sbjct 522401 -TGATAGGACTTCCTAAAGCTCGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGA 522343
Query 142643 GAAATATATTCAATAATTGATGCTGAAGTTTT---GTTAATAGATTTTAACGAATCACCG 142699
|||| ||||| | ||| ||| |||| | |||||||| ||||| ||| |
Sbjct 522342 GAAACATATTTTACAAT---TGCACTAGTTGTAGCATTAATAGAGTTTAAATTATCTGCA 522286
Query 142700 GCTTCAATAACTACACAACTAGAGAACTGGCGAGTTGGAGTACGAGCACCTGCCATAATT 142759
|||||| | |||||| | || || |||||||| || | | |||| ||||||
Sbjct 522285 CATTCAATTAACACACAAGAACTAAATTGACGAGTTGGTGTTCTTACTCCTGACATAATC 522226
Query 142760 GGGGTTGGCAATGAAACTTGATGAGTAGAAACGGCATCATAAAAACGAATAATATGTTTC 142819
|| || || | || | || | ||| |||| |||| |||||| || ||||| |||
Sbjct 522225 GGTGTGGGTAGAGATATTTTAAAAGTGGAAATTGCATTATAAAAGCGCTGAATATAATTC 522166
Query 142820 AAACG 142824
| |||
Sbjct 522165 ATACG 522161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 539862122922080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |