Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_027331.1
Length=170341
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 150 2e-31
>seq129631
Length=630463
Score = 150 bits (166), Expect = 2e-31
Identities = 303/444 (68%), Gaps = 14/444 (3%)
Strand=Plus/Minus
Query 143127 TTGATTTGAAGACCATAGTCCAGGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTTC 143186
|| ||||| | | |||| || || ||||| | || ||||| || | ||| | || ||
Sbjct 522615 TTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATTT 522556
Query 143187 TTAAGTACGAGGAGATTCTCGACTTCAAGATGCCAAATTGGATAGTACAATGTTGCGGCA 143246
|| | || | | ||| || | ||| |||||||| ||||| || | | ||||||||
Sbjct 522555 TTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGCC 522496
Query 143247 CCACCACGAACTCCGCCTTGGGAACAGGATTTAACTGCAGTTTGGAAGTGTTTCCAGAAA 143306
|| || | |||||| ||||| ||||| ||||| ||||| ||||||||||||| | |||
Sbjct 522495 CCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAAAAA 522436
Query 143307 GGAATAACTCCAGTATGCTTGACTTCACCGTTTCCGATTTTTGAACCTTCT---GCACGC 143363
|||||| ||| ||||| |||| || |||| || | | || | || || ||
Sbjct 522435 GGAATACATCCGGTATGAAATGCTTCTCCATTTCTGA---TAGGACTTCCTAAAGCTCGA 522379
Query 143364 AACATCCCCGCGTTAATGCCAATACCTGCACGCTTACTGATATACTCAATAATGCTTGCA 143423
| || ||||||||||| || ||||| || | | | ||| | | || |||||
Sbjct 522378 ATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAA---TTGCA 522322
Query 143424 CTGGCTTT---GTTAATTGA-CTTAAGTGAGTCACCAGCTTCAATAACAACACAAGAGCT 143479
|| | | | ||||| || |||| | | || || |||||| | |||||||| ||
Sbjct 522321 CTAGTTGTAGCATTAATAGAGTTTAAATTA-TCTGCACATTCAATTAACACACAAGAACT 522263
Query 143480 AAACTGACGAGTCGGTGTACGAGCCCCGGCCATAATTGGAGTAGGCAAAGAAATTTGACG 143539
||| |||||||| ||||| | | || | |||||| || || || | ||| |||| |
Sbjct 522262 AAATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAA 522203
Query 143540 AGTAGATACGGCGTCATAAAAACG 143563
||| || | || | |||||| ||
Sbjct 522202 AGTGGAAATTGCATTATAAAAGCG 522179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543947293226640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |