Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_027331.1 Length=170341 Score E Sequences producing significant alignments: (Bits) Value seq129631 150 2e-31 >seq129631 Length=630463 Score = 150 bits (166), Expect = 2e-31 Identities = 303/444 (68%), Gaps = 14/444 (3%) Strand=Plus/Minus Query 143127 TTGATTTGAAGACCATAGTCCAGGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTTC 143186 || ||||| | | |||| || || ||||| | || ||||| || | ||| | || || Sbjct 522615 TTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATTT 522556 Query 143187 TTAAGTACGAGGAGATTCTCGACTTCAAGATGCCAAATTGGATAGTACAATGTTGCGGCA 143246 || | || | | ||| || | ||| |||||||| ||||| || | | |||||||| Sbjct 522555 TTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGCC 522496 Query 143247 CCACCACGAACTCCGCCTTGGGAACAGGATTTAACTGCAGTTTGGAAGTGTTTCCAGAAA 143306 || || | |||||| ||||| ||||| ||||| ||||| ||||||||||||| | ||| Sbjct 522495 CCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAAAAA 522436 Query 143307 GGAATAACTCCAGTATGCTTGACTTCACCGTTTCCGATTTTTGAACCTTCT---GCACGC 143363 |||||| ||| ||||| |||| || |||| || | | || | || || || Sbjct 522435 GGAATACATCCGGTATGAAATGCTTCTCCATTTCTGA---TAGGACTTCCTAAAGCTCGA 522379 Query 143364 AACATCCCCGCGTTAATGCCAATACCTGCACGCTTACTGATATACTCAATAATGCTTGCA 143423 | || ||||||||||| || ||||| || | | | ||| | | || ||||| Sbjct 522378 ATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAA---TTGCA 522322 Query 143424 CTGGCTTT---GTTAATTGA-CTTAAGTGAGTCACCAGCTTCAATAACAACACAAGAGCT 143479 || | | | ||||| || |||| | | || || |||||| | |||||||| || Sbjct 522321 CTAGTTGTAGCATTAATAGAGTTTAAATTA-TCTGCACATTCAATTAACACACAAGAACT 522263 Query 143480 AAACTGACGAGTCGGTGTACGAGCCCCGGCCATAATTGGAGTAGGCAAAGAAATTTGACG 143539 ||| |||||||| ||||| | | || | |||||| || || || | ||| |||| | Sbjct 522262 AAATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAA 522203 Query 143540 AGTAGATACGGCGTCATAAAAACG 143563 ||| || | || | |||||| || Sbjct 522202 AGTGGAAATTGCATTATAAAAGCG 522179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543947293226640