Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq129631 102 9e-17 >seq129631 Length=630463 Score = 102 bits (112), Expect = 9e-17 Identities = 272/412 (66%), Gaps = 8/412 (2%) Strand=Plus/Minus Query 147783 ATTAATCTGGACGCCATAATCTAAGTGACGAATACGGTTCTCGTCTACACCTTTATTGTT 147842 |||||| || || ||||||| | ||||| | | || || || | ||| |||| || Sbjct 522616 ATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATT 522557 Query 147843 TTTCAGAACGAGAAGGTTTTCGACTTCTAAATGCCAAATTGGATAGTACAATGTTGCTGC 147902 ||| | ||| | | ||||| | ||||| |||||| ||||| || | | ||||| || Sbjct 522556 TTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGC 522497 Query 147903 ACCACCACGTACACCACCTTGGGAACATGATTTAACAGAAGCTTGAATAGT-TTTCCAGA 147961 || || | || |||||||| ||||| ||||| || | ||| | ||| ||| | | Sbjct 522496 CCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGA-AGTGTTTATAAA 522438 Query 147962 ATGGAATCACGCCTGTGTGCTTAACTTCACCATGTCCAATCTTAGAACCTTCT---GCAC 148018 | ||||| || || || |||| |||| || || || || | || || | Sbjct 522437 AAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGAT---AGGACTTCCTAAAGCTC 522381 Query 148019 GAATCATACCAGCGTTAACACCAATACCAGCTCGTTTACTGATGTACTTAATGATTGAAG 148078 |||| ||||||||||| || || || ||||||| | | || || | |||| | Sbjct 522380 GAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCAC 522321 Query 148079 CATTTGTGGTATTAATCGAATCCAGTGAATCACCACCTTCAATAACAACACAACTCGAGA 148138 | |||| | |||||| || | | ||| ||| |||||| | |||||| | Sbjct 522320 TAGTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTAA 522261 Query 148139 ATTGACGAGTCGGAGTACGAACACCTGCCATAATTGGAGTTGGCAGTGAAAT 148190 |||||||||| || || | || |||| |||||| || || || || || || Sbjct 522260 ATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATAT 522209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567270134167920