Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_028683.1
Length=177643
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 102 9e-17
>seq129631
Length=630463
Score = 102 bits (112), Expect = 9e-17
Identities = 272/412 (66%), Gaps = 8/412 (2%)
Strand=Plus/Minus
Query 147783 ATTAATCTGGACGCCATAATCTAAGTGACGAATACGGTTCTCGTCTACACCTTTATTGTT 147842
|||||| || || ||||||| | ||||| | | || || || | ||| |||| ||
Sbjct 522616 ATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATT 522557
Query 147843 TTTCAGAACGAGAAGGTTTTCGACTTCTAAATGCCAAATTGGATAGTACAATGTTGCTGC 147902
||| | ||| | | ||||| | ||||| |||||| ||||| || | | ||||| ||
Sbjct 522556 TTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGC 522497
Query 147903 ACCACCACGTACACCACCTTGGGAACATGATTTAACAGAAGCTTGAATAGT-TTTCCAGA 147961
|| || | || |||||||| ||||| ||||| || | ||| | ||| ||| | |
Sbjct 522496 CCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGA-AGTGTTTATAAA 522438
Query 147962 ATGGAATCACGCCTGTGTGCTTAACTTCACCATGTCCAATCTTAGAACCTTCT---GCAC 148018
| ||||| || || || |||| |||| || || || || | || || |
Sbjct 522437 AAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGAT---AGGACTTCCTAAAGCTC 522381
Query 148019 GAATCATACCAGCGTTAACACCAATACCAGCTCGTTTACTGATGTACTTAATGATTGAAG 148078
|||| ||||||||||| || || || ||||||| | | || || | |||| |
Sbjct 522380 GAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCAC 522321
Query 148079 CATTTGTGGTATTAATCGAATCCAGTGAATCACCACCTTCAATAACAACACAACTCGAGA 148138
| |||| | |||||| || | | ||| ||| |||||| | |||||| |
Sbjct 522320 TAGTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTAA 522261
Query 148139 ATTGACGAGTCGGAGTACGAACACCTGCCATAATTGGAGTTGGCAGTGAAAT 148190
|||||||||| || || | || |||| |||||| || || || || || ||
Sbjct 522260 ATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATAT 522209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 567270134167920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |