Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_028829.1
Length=248088
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 140 5e-28
>seq129631
Length=630463
Score = 140 bits (154), Expect = 5e-28
Identities = 292/426 (69%), Gaps = 12/426 (3%)
Strand=Plus/Minus
Query 236266 TAGTCAAGATGACGAATACGGTTTTCTTCAACACCTTTGTTGTTCTTCAGAACTAACAGT 236325
|| ||||||||||| | | |||||||||| ||| | || || || | |||||| |
Sbjct 522600 TAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATTTTTTAAAACTAATAAA 522541
Query 236326 TTTTCAACTTCTAAGTGCCAAATCGGGTAAGTTAGAGTCGCAGCACCACCACGTACACCA 236385
||||||| ||||| ||||| || |||||| | ||| || || || || | || |||
Sbjct 522540 TTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGCCCCTCCTCTAACTCCA 522481
Query 236386 CCTTGAGAACACGATTTAACCGCAGTTTGAAAGTGTTTCCAGAATGGAATTACA-CCAGT 236444
||||||||||| ||||| || || |||| |||||||| | || |||| |||| || ||
Sbjct 522480 CCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAAAAAGGAA-TACATCCGGT 522422
Query 236445 GTG--ACGAATCTCACCTGAACGA-ACGACTGCCCCTTCAGCACGAATCGCACCGCCATT 236501
|| | | |||| | | || | |||| ||| ||| ||||| ||| | ||
Sbjct 522421 ATGAAATGCTTCTC-CATTTCTGATAGGACT--TCCTAAAGCTCGAATTTGACCAGCGTT 522365
Query 236502 CACACCGATACCTGCACGCTTACTAATGTAACTTACAATTGATTTAGCCACTTCATTGAT 236561
| || || ||||| || | | || || ||||||||| ||| |||| ||
Sbjct 522364 AATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTAGTTGTAGCATTAAT 522305
Query 236562 TGAATGCAAAGAGTCGCCTGATTCAATCTTAACACAC--GAACTAAACTGGCGTGTCGGG 236619
|| | ||| || | |||||| ||||||||| |||||||| || || || ||
Sbjct 522304 AGAGTTTAAATTATCTGCACATTCAA--TTAACACACAAGAACTAAATTGACGAGTTGGT 522247
Query 236620 GTACGAACGCCTGCCATAATCGGTGTCGGTAATGAAAGTTTGTGAGTCGAAACTGCATTG 236679
|| | || |||| |||||||||||| |||| || | ||| ||| |||| ||||||
Sbjct 522246 GTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAAGTGGAAATTGCATTA 522187
Query 236680 TAGAAG 236685
|| |||
Sbjct 522186 TAAAAG 522181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 792273904382720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |