Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_028834.1
Length=48216
Score E
Sequences producing significant alignments: (Bits) Value
seq8352 80.6 8e-11
seq14 80.6 8e-11
seq12 80.6 8e-11
seq10 80.6 8e-11
seq8 80.6 8e-11
seq7 80.6 8e-11
seq6 80.6 8e-11
seq5 80.6 8e-11
seq4 80.6 8e-11
seq3 80.6 8e-11
seq2 80.6 8e-11
seq1 80.6 8e-11
>seq8352
Length=948
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 899 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 840
Query 36341 C 36341
|
Sbjct 839 C 839
>seq14
Length=755408349
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 51024998 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 51025057
Query 36341 C 36341
|
Sbjct 51025058 C 51025058
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 746330811 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 746330752
Query 36341 C 36341
|
Sbjct 746330751 C 746330751
>seq12
Length=703217322
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 155760635 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 155760694
Query 36341 C 36341
|
Sbjct 155760695 C 155760695
>seq10
Length=712180895
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 712176912 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 712176853
Query 36341 C 36341
|
Sbjct 712176852 C 712176852
>seq8
Length=673896466
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 309835486 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 309835545
Query 36341 C 36341
|
Sbjct 309835546 C 309835546
>seq7
Length=726427787
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 677823574 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 677823633
Query 36341 C 36341
|
Sbjct 677823634 C 677823634
>seq6
Length=841096276
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 100948256 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 100948197
Query 36341 C 36341
|
Sbjct 100948196 C 100948196
>seq5
Length=754274518
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 659158714 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 659158773
Query 36341 C 36341
|
Sbjct 659158774 C 659158774
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 690359043 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 690359102
Query 36341 C 36341
|
Sbjct 690359103 C 690359103
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 715322771 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 715322830
Query 36341 C 36341
|
Sbjct 715322831 C 715322831
>seq4
Length=803365466
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 27147045 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 27147104
Query 36341 C 36341
|
Sbjct 27147105 C 27147105
>seq3
Length=775183943
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 198073053 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 198072994
Query 36341 C 36341
|
Sbjct 198072993 C 198072993
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 666124383 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 666124442
Query 36341 C 36341
|
Sbjct 666124443 C 666124443
>seq2
Length=690537804
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 345735064 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 345735005
Query 36341 C 36341
|
Sbjct 345735004 C 345735004
>seq1
Length=593586810
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 45056868 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 45056809
Query 36341 C 36341
|
Sbjct 45056808 C 45056808
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 153896570841624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |