Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_028847.1
Length=170527
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 156 5e-33
>seq129631
Length=630463
Score = 156 bits (172), Expect = 5e-33
Identities = 248/353 (70%), Gaps = 2/353 (1%)
Strand=Plus/Minus
Query 143969 CCTTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAA 144028
||| | || ||||| | ||| | | |||||||| ||| | |||||| || || ||| ||
Sbjct 522567 CCTCTATTATTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAA 522508
Query 144029 GCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAA 144088
|||| || || || || | | ||||||||| ||||| ||||| || || | |||||
Sbjct 522507 ACAGTTGCGGCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAG 522448
Query 144089 TGTTTCCAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCT 144148
||||| | || |||||| |||||||| |||| || | | ||| || |||
Sbjct 522447 TGTTTATAAAAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCT 522388
Query 144149 TCAGCACGAATCATACCAACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAATT 144208
||| ||||| |||| |||| || || || || || |||| ||||| |||| |
Sbjct 522387 AAAGCTCGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACA 522328
Query 144209 ATTGAGTTAGCAGTTTTGTTAATAGA-TTTCAGTGAGTCGCCTGCTTCAATAACCACACA 144267
|||| ||| || |||||||| ||| | | | || | |||||| | ||||||
Sbjct 522327 ATTGCACTAGTTGTAGCATTAATAGAGTTTAAATTA-TCTGCACATTCAATTAACACACA 522269
Query 144268 AGAACTAAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTTGGTA 144320
||||||||||||||| |||||||| | | |||| | |||||| || || ||||
Sbjct 522268 AGAACTAAATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTA 522216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 544541383669680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |