Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_028881.1
Length=170473
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 138 1e-27
>seq129631
Length=630463
Score = 138 bits (152), Expect = 1e-27
Identities = 291/433 (67%), Gaps = 6/433 (1%)
Strand=Plus/Minus
Query 142874 TAGTCCATATGACGAATACGGTTCTCATCAACGCCTTTGTTGTTTTTCAGAACGAGCAGA 142933
|| || | |||||| | | || || |||| ||| | || ||||| | ||| | | |
Sbjct 522600 TAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATTTTTTAAAACTAATAAA 522541
Query 142934 TTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGGATTCCA 142993
||||||| ||| | |||||| || || ||| || |||| || || || || | | ||||
Sbjct 522540 TTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGCCCCTCCTCTAACTCCA 522481
Query 142994 CCTTGTGAACATGATTTAACTGCAGTCTGGAAATGCTTCCAGAATGGAATAACACCGGTA 143053
||||| ||||| ||||| ||||| | ||||| || || | || |||||| ||||||
Sbjct 522480 CCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAAAAAGGAATACATCCGGTA 522421
Query 143054 TGTTTGACTTCACCCATACCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGATA 143113
|| |||| || | | ||| || ||| ||| ||||| |||| |||| ||
Sbjct 522420 TGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGAATTTGACCAGCGTTAATG 522361
Query 143114 CCAATACCTGCACGTTTAGAAATATACTCGATTATTGAGTTAGCAGTTTTATTAATTGAT 143173
|| || ||||| |||| ||||| ||| | | |||| ||| || |||||| ||
Sbjct 522360 CCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTAGTTGTAGCATTAATAGAG 522301
Query 143174 TTCAGCGAGTCACCTGC---TTCAATAACAACGCAAGAACTAAACTGACGGGTCGGGGTA 143230
|| | | | | |||| |||||| | || ||||||||||| ||||| || || ||
Sbjct 522300 TTTA---AATTATCTGCACATTCAATTAACACACAAGAACTAAATTGACGAGTTGGTGTT 522244
Query 143231 CGAGCACCAGCCATAATAGGAGTAGGCAATGAAATCTGACGGGTGCTAACAGCATCATAA 143290
| | || | |||||| || || || | || || | | ||| || |||| ||||
Sbjct 522243 CTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAAGTGGAAATTGCATTATAA 522184
Query 143291 AAACGAATAATAT 143303
|| || |||||
Sbjct 522183 AAGCGCTGAATAT 522171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 544368905799120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |