Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_028894.1 Length=170336 Score E Sequences producing significant alignments: (Bits) Value seq129631 120 3e-22 >seq129631 Length=630463 Score = 120 bits (132), Expect = 3e-22 Identities = 267/401 (67%), Gaps = 0/401 (0%) Strand=Plus/Minus Query 140766 TTATTCAACTGGACACCATAGTCCATATGCCTGATACGGTTTTCTTCAACGCCTTTGTTG 140825 ||||| | || ||| |||| || | ||| | | | |||||||||| ||| | || Sbjct 522618 TTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTA 522559 Query 140826 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCA 140885 || || | ||| | ||||||||||| ||| | |||||| || || ||| || |||| || Sbjct 522558 TTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCG 522499 Query 140886 GCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATGTTTCCAG 140945 || || || | | ||||||||| ||||| ||||| || || ||||||| ||||| | Sbjct 522498 GCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAA 522439 Query 140946 AACGGAATAACACCAGTATGCTTGACTTCACCCATACCGATTTTCGAACCTTCAGCACGA 141005 || |||||| || ||||| |||| || | | ||| ||| ||| ||| Sbjct 522438 AAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGA 522379 Query 141006 ATCATGCCAACGTTGATACCGATACCTGCACGCTTACTGATATATTCGATGATTGAATTA 141065 || ||| |||| || || || ||||| || | | | ||||| | |||| | || Sbjct 522378 ATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTA 522319 Query 141066 GCAGTCTTATTGATTGACTTCAGGGAGTCAGCCGCTTCGATAACCACGCAGGAACTGAAC 141125 | || ||| || || || | || || ||| || | ||| || ||||| || Sbjct 522318 GTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTAAAT 522259 Query 141126 TGTCTTGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGG 141166 || | || |||||||| | || | ||| || |||||||| Sbjct 522258 TGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGG 522218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543931323053440