Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_028894.1
Length=170336
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 120 3e-22
>seq129631
Length=630463
Score = 120 bits (132), Expect = 3e-22
Identities = 267/401 (67%), Gaps = 0/401 (0%)
Strand=Plus/Minus
Query 140766 TTATTCAACTGGACACCATAGTCCATATGCCTGATACGGTTTTCTTCAACGCCTTTGTTG 140825
||||| | || ||| |||| || | ||| | | | |||||||||| ||| | ||
Sbjct 522618 TTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTA 522559
Query 140826 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCA 140885
|| || | ||| | ||||||||||| ||| | |||||| || || ||| || |||| ||
Sbjct 522558 TTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCG 522499
Query 140886 GCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATGTTTCCAG 140945
|| || || | | ||||||||| ||||| ||||| || || ||||||| ||||| |
Sbjct 522498 GCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAA 522439
Query 140946 AACGGAATAACACCAGTATGCTTGACTTCACCCATACCGATTTTCGAACCTTCAGCACGA 141005
|| |||||| || ||||| |||| || | | ||| ||| ||| |||
Sbjct 522438 AAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGA 522379
Query 141006 ATCATGCCAACGTTGATACCGATACCTGCACGCTTACTGATATATTCGATGATTGAATTA 141065
|| ||| |||| || || || ||||| || | | | ||||| | |||| | ||
Sbjct 522378 ATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTA 522319
Query 141066 GCAGTCTTATTGATTGACTTCAGGGAGTCAGCCGCTTCGATAACCACGCAGGAACTGAAC 141125
| || ||| || || || | || || ||| || | ||| || ||||| ||
Sbjct 522318 GTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTAAAT 522259
Query 141126 TGTCTTGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGG 141166
|| | || |||||||| | || | ||| || ||||||||
Sbjct 522258 TGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGG 522218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543931323053440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |