Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_028925.1 Length=170822 Score E Sequences producing significant alignments: (Bits) Value seq129631 131 2e-25 >seq129631 Length=630463 Score = 131 bits (144), Expect = 2e-25 Identities = 293/440 (67%), Gaps = 0/440 (0%) Strand=Plus/Minus Query 143094 TTATTAAGCTGGACACCATAGTCCATATGTCTGATACGGTTTTCTTCAACGCCCTTGTTG 143153 ||||||| || ||| |||| || | ||| | | | |||||||||| || | || Sbjct 522618 TTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTA 522559 Query 143154 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCA 143213 || || | ||| | ||||||||||| ||| | |||||||| || ||| || |||| || Sbjct 522558 TTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCG 522499 Query 143214 GCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAG 143273 || || || | | ||||||||| ||||| ||||| || || ||||||| ||||| | Sbjct 522498 GCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAA 522439 Query 143274 AACGGAATAACACCAGTATGGCGAACTTCACCCATACCGATTTTCGAACCTTCAGCACGA 143333 || |||||| || ||||| |||| || | | ||| ||| ||| ||| Sbjct 522438 AAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGA 522379 Query 143334 ATCATACCAACGTTGATGCCGATACCCGCACGCTTACTGATATATTCGATGATTGAATTG 143393 || |||| |||| ||||| || || || || | | | ||||| | |||| | | Sbjct 522378 ATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTA 522319 Query 143394 GCCGTCTTATTAATTGACTTCAGGGAGTCAGCAGCTTCGATAACCACACAGGAACTGAAC 143453 | || |||||| || || | || ||| ||| || | |||||| ||||| || Sbjct 522318 GTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTAAAT 522259 Query 143454 TGCCTGGTAGGTGTTCTGGCGCCCGCCATGATGGGCGTGGGCAACGAAACCTGTCTTGTG 143513 || | || |||||||| | || | ||| || || ||||| | || | | ||| Sbjct 522258 TGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAAGTG 522199 Query 143514 GATACTGCATCATAAAAACG 143533 || | ||||| |||||| || Sbjct 522198 GAAATTGCATTATAAAAGCG 522179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545483623888480