Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq14 93.3 3e-14
>seq14
Length=755408349
Score = 93.3 bits (102), Expect = 3e-14
Identities = 162/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| |||||||| || || || || || || || | || || || ||
Sbjct 638076637 ATGCAAATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 638076696
Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| ||| | ||| |||||| || || |||||||| || | || || |
Sbjct 638076697 GACACGATCGATAAT--GTCAAAGCGAAGATCCAGGACAAAGAGGGCATCCCCCCAGACC 638076754
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTAC 27966
|||| ||||| || |||||||| || ||| | || || | ||||| |||| | ||||||
Sbjct 638076755 AGCAGCGGTTGATCTTTGCCGGCAAGCAACTTGAGGATGGACGCACTCTTG-CTGATTAC 638076813
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017
|||||||||||||| |||| |||| |||||| | ||| | ||||| |||
Sbjct 638076814 AACATCCAAAAAGAATCCACTCTGCACTTGGTTCTCCGTCTCCGTGGTGGC 638076864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355215594955218
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |