Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq14 125 5e-24
seq13 122 6e-23
seq11 98.7 7e-16
seq12 95.1 8e-15
>seq14
Length=755408349
Score = 125 bits (138), Expect = 5e-24
Identities = 156/211 (74%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || |||||||| || || || ||||| ||||| ||||| || |
Sbjct 638076637 ATGCAAATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 638076696
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | ||| | || | | |||||||| || | || ||||| ||
Sbjct 638076697 GACACGATCGATAATGTCAAAGCGAAGA-TCCAGGACAAAGAGGGCATCCCCCCAGACCA 638076755
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| || || ||||||||||| ||||| || || | ||||||| | | ||||||||
Sbjct 638076756 GCAGCGGTTGATCTTTGCCGGCAAGCAACTTGAGGATGGACGCACTCTTGCTGATTACAA 638076815
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820
||| |||||||| ||||| | || || |||
Sbjct 638076816 CATCCAAAAAGAATCCACTCTGCACTTGGTT 638076846
Score = 107 bits (118), Expect = 1e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || || ||||| || || || ||||| || || || || ||| |
Sbjct 638037707 ATGCAGATTTTTGTGAAGACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGTCCTCT 638037766
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | ||| || || || || ||| | ||||| || ||
Sbjct 638037767 GACACAATTGACAATGTCAAGGC-AAAGATCCAGGATAAGGAGGGTATCCCGCCGGACCA 638037825
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || ||||| ||||| ||||| || || | || || ||| ||||||||
Sbjct 638037826 GCAGCGACTCATCTTTGCTGGCAAGCAACTCGAGGATGGGCGGACACTAGCTGATTACAA 638037885
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820
||| || ||||||||||| | || || |||
Sbjct 638037886 CATCCAGAAAGAGTCCACCCTCCACTTGGTT 638037916
Score = 102 bits (112), Expect = 5e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| ||||||||||| || || || |||||||| || || || || ||
Sbjct 655250023 ATGCAGATCTTCGTGAAAACCCTCACTGGCAAGACCATCACTCTAGAGGTCGAGTCTTCG 655249964
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || ||| | || | || | | ||||| || || | || ||||| ||
Sbjct 655249963 GATACAATCGACAATGTGAAGGCGAAGA-TCCAGGACAAGGAGGGCATCCCTCCAGACCA 655249905
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| ||||| || || || || | |||||| | | ||||||||
Sbjct 655249904 GCAGAGGTTGATCTTTGCGGGCAAGCAGCTTGAGGATGGTCGCACTCTGGCGGATTACAA 655249845
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
||| || || ||||| || | ||||| ||
Sbjct 655249844 CATTCAGAAGGAGTCTACTCTCCATTTGGT 655249815
Score = 93.3 bits (102), Expect = 3e-14
Identities = 121/165 (73%), Gaps = 2/165 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || |||||||| || || || ||||| || || ||||| ||| ||
Sbjct 621204704 ATGCAGATATTTGTCAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGTCCTCG 621204645
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || | | ||||| || ||| | || || |||||
Sbjct 621204644 GACACCATTGACAATGTGAAGGCCAAGA-TCCAGGACAAGGAGGGTATCCCACCGGATCA 621204586
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC 23774
|||||| | || ||||||||||| || || || || | |||||
Sbjct 621204585 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCAC 621204541
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||||| || || || || ||||| || || ||||| || |
Sbjct 637986922 ATGCAGATTTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTGGAGGTTGAATCGTCA 637986981
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || | | ||||| || ||| | || || || ||
Sbjct 637986982 GACACCATTGACAATGTGAAGGCGAAGA-TCCAGGACAAGGAGGGTATCCCCCCGGACCA 637987040
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| || || || || || || || || || || | |||||| | | ||||||||
Sbjct 637987041 GCAGCGCTTGATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGCACTCTGGCTGATTACAA 637987100
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 637987101 CATTCAGAAGGAGTCTAC 637987118
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || ||||| || || || || ||||| | ||||| || || ||
Sbjct 643860256 ATGCAGATTTTTGTCAAGACCCTTACTGGCAAGACTATCACCTTGGAAGTGGAGTCTTCG 643860197
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || || ||||| || ||| | || || || ||
Sbjct 643860196 GACACCATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 643860137
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || || || || || || || || | |||||||| | ||||||||
Sbjct 643860136 CAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGTCGCACTTTGGCTGATTACAAT 643860077
Query 23791 ATACAAAAAGAGTCCAC 23807
|| ||||| ||||| ||
Sbjct 643860076 ATTCAAAAGGAGTCTAC 643860060
Score = 84.2 bits (92), Expect = 1e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || ||||| || || || || ||||| || || || || || |
Sbjct 620934009 ATGCAGATTTTTGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTCGAGTCGTCT 620933950
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || | | ||||| || || | || || || ||
Sbjct 620933949 GACACCATTGACAATGTGAAGGCCAAGA-TCCAGGACAAGGAGGGCATTCCCCCGGACCA 620933891
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || || || ||||| || || || || | ||||| | | ||||||||
Sbjct 620933890 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTTGCGGATTACAA 620933831
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 620933830 CATCCAGAAGGAGTCCAC 620933813
>seq13
Length=727576108
Score = 122 bits (134), Expect = 6e-23
Identities = 146/196 (74%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || |||||||| || || || ||||| ||||| ||||| || |
Sbjct 657438098 ATGCAAATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 657438157
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| | ||| | || | | ||||| || || | || ||||| ||
Sbjct 657438158 GATACGATTGACAATGTCAAAGCGAAGA-TCCAAGACAAGGAGGGCATCCCCCCAGACCA 657438216
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| || |||||||||||||| ||||| || || | || |||||| | ||||||||
Sbjct 657438217 GCAGCGGTTGATATTTGCCGGCAAGCAACTTGAGGATGGACACACTTTTGCTGATTACAA 657438276
Query 23790 CATACAAAAAGAGTCC 23805
||| || |||||||||
Sbjct 657438277 CATTCAGAAAGAGTCC 657438292
Score = 102 bits (112), Expect = 5e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || |||||||| || || || ||||| || || || || ||| ||
Sbjct 643167940 ATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACCATCACACTTGAGGTCGAGTCCTCG 643167881
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || || ||||| ||||| | || || || ||
Sbjct 643167880 GACACAATTGACAATGTGAAGGC-TAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCA 643167822
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| ||| | || ||||| ||||| || ||||| || | ||||| | | || |||||
Sbjct 643167821 GCAACGTCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGGCTGACTACAA 643167762
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 643167761 CATCCAGAAGGAGTCCAC 643167744
Score = 102 bits (112), Expect = 5e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || | || |||||||| || || || ||||| ||||| || || ||| |
Sbjct 657250243 ATGCAGATCTTTGCGAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCCTCC 657250302
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| |||| | || | || ||||| || || | ||||| || ||
Sbjct 657250303 GACACCATCGACAATGTTAAGGCGAAGA-TTCAAGACAAGGAGGGCATCCCGCCGGACCA 657250361
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | ||||| | ||||| || || || |||||||| ||| | | ||||||||
Sbjct 657250362 GTAGCATCTGATATTCACAGGCAAGCAGCTCGAGGACGAACGTACTCTTGCTGATTACAA 657250421
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 657250422 CATTCAGAAGGAGTCCAC 657250439
Score = 98.7 bits (108), Expect = 7e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || |||||||| || || || ||||| || || ||||| ||| |
Sbjct 643789858 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCCTCA 643789799
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || | | ||||| || || | || || || ||
Sbjct 643789798 GACACCATTGACAATGTGAAGGCCAAGA-TCCAGGACAAGGAGGGCATCCCCCCGGACCA 643789740
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || ||||||||||| || || || || | ||||| | | ||||||||
Sbjct 643789739 GCAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCGGATTACAA 643789680
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 643789679 CATCCAGAAGGAGTCCAC 643789662
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || || ||||| || || || || || ||
Sbjct 658874773 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTGGAGGTGGAATCTTCG 658874714
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || | | |||||||| || | || || || ||
Sbjct 658874713 GACACCATTGACAATGTGAAGGCGAAGA-TCCAGGACAAAGAGGGCATCCCCCCGGACCA 658874655
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || ||||| ||||| || || || || | |||||| | | ||||||||
Sbjct 658874654 GCAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTGCGGATTACAA 658874595
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
||| || || ||||| || |||| || ||
Sbjct 658874594 CATTCAGAAGGAGTCTACTGTACACTTGGT 658874565
Score = 93.3 bits (102), Expect = 3e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || ||||||||||| || || |||||||| || ||||| || ||
Sbjct 643772778 ATGCAAATCTTTGTGAAGACCCTCACGGGCAAGACCATCACTCTGGAGGTTGAGTCTTCG 643772719
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || || ||||| || || | || ||||| ||
Sbjct 643772718 GACACGATCGACAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGCATCCCACCAGACCA 643772660
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || ||||| || || || || || || | ||||| | | ||||| ||
Sbjct 643772659 GCAGCGCCTCATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGGCTGATTATAA 643772600
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
||| || || |||||||| | ||||| ||
Sbjct 643772599 CATCCAGAAGGAGTCCACCCTTCATTTGGT 643772570
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || || ||||| || || || || || ||
Sbjct 658881014 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTGGAGGTGGAATCTTCG 658880955
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || || |||||||| || | || || || ||
Sbjct 658880954 GACACCATTGACAACGTGAAGGCGAAGATCCAAGACAAAGAGGGCATCCCCCCGGACCAG 658880895
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || ||||| ||||| || || || || | |||||| | | |||||||||
Sbjct 658880894 CAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTGCGGATTACAAC 658880835
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||| ||
Sbjct 658880834 ATTCAGAAGGAGTCTAC 658880818
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||||||||| || || ||||| || || || || ||| |
Sbjct 643773234 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTTG 643773175
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| | || | | || || || ||||| || || | || || || ||
Sbjct 643773174 GACACTATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 643773115
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || || || ||||| || || || || | ||||| | | || ||||||
Sbjct 643773114 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGGCTGACTACAAC 643773055
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 643773054 ATCCAGAAGGAGTCCAC 643773038
>seq11
Length=621432051
Score = 98.7 bits (108), Expect = 7e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || ||||| || || || ||||| || || || || ||| ||
Sbjct 54897293 ATGCAGATTTTCGTCAAGACGCTCACCGGCAAGACCATCACCCTGGAGGTGGAGTCCTCG 54897234
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || || ||||| || || | || || || ||
Sbjct 54897233 GACACCATTGACAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 54897175
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||||||||| || || || || | ||||| | | || |||||
Sbjct 54897174 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCAGACTACAA 54897115
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 54897114 CATCCAGAAGGAGTCTAC 54897097
Score = 93.3 bits (102), Expect = 3e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763
||||| ||||| | |||||||| || || | ||||| ||||| || || || ||||||
Sbjct 126977177 GACAAGGAAGGCATCCCGCCAGACCAGCAAAGGTTAATTTTTGCTGGAAAGCAGCTGGAA 126977236
Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGT 23819
|| | ||| || |||| || |||||||| ||||||||||| ||| | ||||| ||
Sbjct 126977237 GATGGACGGACATTAGCTGACTACAACATTCAAAAAGAGTCAACACTTCATTTGGT 126977292
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| ||||| || || ||||| || || || || ||| ||
Sbjct 54715553 ATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACGCTGGAGGTGGAGTCCTCG 54715612
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || || ||||| || || | || || || ||
Sbjct 54715613 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 54715672
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || ||||||||||| || || || || | |||||| | | || ||||||
Sbjct 54715673 CAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTGGCAGACTACAAC 54715732
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||| ||
Sbjct 54715733 ATCCAGAAGGAGTCTAC 54715749
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || |||||||| || || || ||||| || || || || ||| |
Sbjct 90159990 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACACTTGAGGTGGAGTCCTCC 90160049
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || || ||||| || || || || || || ||
Sbjct 90160050 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCGTCCCACCGGACCAG 90160109
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || |||||||| || || || || | ||||| | | ||||||||||
Sbjct 90160110 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTTGCCGATTACAAC 90160169
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 90160170 ATCCAGAAGGAGTCCAC 90160186
Score = 89.7 bits (98), Expect = 3e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || ||||| || || || || || || ||||| |||||||| ||
Sbjct 492791176 ATGCAGATCTTTGTGAAAACTCTTACCGGGAAGACCATAACTCTAGAAGTTGAGAGTTCG 492791117
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || |||| | | ||||| || ||| | || ||||||||
Sbjct 492791116 GACACCATCGACAATGTCAAGGCAAAGA-TCCAGGACAAGGAGGGTATCCCACCAGATCA 492791058
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | | || || || ||||| || || || || | || || || | ||||||||
Sbjct 492791057 ACAGAGGCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGTACATTGGCTGATTACAA 492790998
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 492790997 CATTCAGAAGGAGTCTAC 492790980
Score = 87.8 bits (96), Expect = 1e-12
Identities = 133/187 (71%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || |||||||| || || || |||||||| || || || |
Sbjct 492791711 ATGCAGATCTTTGTCAAGACCCTCACAGGCAAGACTATCACTCTTGAGGTCGAGAGTTCA 492791652
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| ||||| | || | || ||||| || || | || || || ||
Sbjct 492791651 GATACCATTGACAATGTTAAAGCCAAGA-TTCAGGACAAGGAGGGCATTCCTCCGGACCA 492791593
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | | |||||||| ||||| || || || || | || || || | |||||||||
Sbjct 492791592 ACAGAGGCTCATATTTGCTGGCAAGCAGCTAGAGGATGGCCGGACATTGGCCGATTACAA 492791533
Query 23790 CATACAA 23796
||| |||
Sbjct 492791532 CATCCAA 492791526
Score = 84.2 bits (92), Expect = 1e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || |||||||| || || || ||||| || || || || || |
Sbjct 54897979 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCT 54897920
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | | ||||| || || | || || || ||
Sbjct 54897919 GACACGATCGACAATGTGAAGGCCAAGA-TCCAGGACAAGGAGGGAATCCCCCCGGACCA 54897861
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || ||||||||||| || || || || | ||||| | | || |||||
Sbjct 54897860 GCAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGGCTGACTACAA 54897801
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 54897800 CATCCAGAAGGAGTCCAC 54897783
>seq12
Length=703217322
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || |||||||| || || || ||||| || || || || ||| |
Sbjct 153870840 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTTGAGGTGGAATCCTCT 153870899
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || || ||||| || || | || || || ||
Sbjct 153870900 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCACCGGACCAG 153870959
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || ||||||||||| || ||||| || | ||||| | | |||||||||
Sbjct 153870960 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTTGCGGATTACAAC 153871019
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 153871020 ATCCAGAAGGAGTCCAC 153871036
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || |||||||| || || || |||||||| || || || |
Sbjct 511297169 ATGCAGATCTTTGTCAAGACCCTCACAGGCAAGACTATCACTCTTGAGGTCGAGAGTTCA 511297110
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| ||||| | || | || ||||| || || | || || || ||
Sbjct 511297109 GATACCATTGACAATGTTAAAGCCAAGA-TTCAGGACAAGGAGGGCATTCCTCCGGACCA 511297051
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | | |||||||| ||||| || || || || | || || || | ||||||||
Sbjct 511297050 ACAGAGGCTCATATTTGCTGGCAAGCAGCTAGAGGATGGCCGAACATTGGCTGATTACAA 511296991
Query 23790 CATACAAAAAGAGTCCAC 23807
||| ||||| ||||| ||
Sbjct 511296990 CATCCAAAAGGAGTCTAC 511296973
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || |||||||| || || || ||||| || || ||||| | |
Sbjct 176515299 ATGCAGATTTTCGTGAAGACCCTCACCGGCAAGACTATCACCCTTGAGGTTGAGAGCTCT 176515240
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || || ||||| || || | || || || ||
Sbjct 176515239 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 176515180
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || |||||||| || ||||| || | ||||| | | || ||||||
Sbjct 176515179 CAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTTGCGGACTACAAC 176515120
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 176515119 ATCCAGAAGGAGTCCAC 176515103
Score = 84.2 bits (92), Expect = 1e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763
||||| ||||| | || ||||| ||||| | | || ||||| || || || ||||||
Sbjct 196921797 GACAAGGAAGGCATCCCACCAGACCAACAAAGGCTGATTTTTGCTGGAAAGCAGCTGGAA 196921738
Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823
|| | ||| || |||| ||||||||||| || |||||||| ||| | ||||| || |
Sbjct 196921737 GATGGACGGACATTAGCTGATTACAACATTCAGAAAGAGTCGACACTTCATTTGGTCCTG 196921678
Query 23824 AGGTTGCGAGGAGG 23837
||| || | || ||
Sbjct 196921677 AGGCTGAGGGGTGG 196921664
Score = 84.2 bits (92), Expect = 1e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || ||||| || || || || || || ||||| || ||||| ||
Sbjct 511296941 ATGCAGATCTTTGTGAAAACTCTTACCGGGAAGACCATAACTCTAGAGGTTGAGAGTTCG 511296882
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || ||| | || |||| | | ||||| || || | || ||||| ||
Sbjct 511296881 GACACTATCGACAATGTCAAGGCAAAGA-TCCAGGACAAGGAGGGCATCCCACCAGACCA 511296823
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | | || || || ||||| || || || || | ||||| || | ||||||||
Sbjct 511296822 ACAGAGGCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGCACATTGGCTGATTACAA 511296763
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 511296762 CATTCAGAAGGAGTCTAC 511296745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337395243680072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |