Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_031011.1
Length=168993
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 147 2e-30
>seq129631
Length=630463
Score = 147 bits (162), Expect = 2e-30
Identities = 306/453 (68%), Gaps = 12/453 (3%)
Strand=Plus/Minus
Query 38189 CATCAAATCATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCC 38248
||| || | ||| | ||| ||| ||||||| | |||||| | | |||||||| | ||
Sbjct 522625 CATTAATTTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCC 522566
Query 38249 TTTGTTATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 38308
| | |||||||| ||||| | | |||||||| ||| | |||||| || || ||| || |
Sbjct 522565 TCTATTATTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAAC 522506
Query 38309 AGTAGCAGCGCCGCCACGAATTCCGCCCTGTGAACATGAGTTAACTGCAGCCTGAAAATG 38368
||| || || || || | || ||| || || ||||| || || ||||| || || ||
Sbjct 522505 AGTTGCGGCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTG 522446
Query 38369 TTTCCAAAAAGGAATAACACCAGGATGGCATACATCACCCATGCCAATCTCAGAACCTTC 38428
||| ||||||||||| || | ||| || | || || | | || | |||
Sbjct 522445 TTTATAAAAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAA 522386
Query 38429 GGCACGAATCATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAAT 38488
|| ||||| |||| ||||||| || ||||| || |||| ||| | ||||| |||||
Sbjct 522385 AGCTCGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAAT 522326
Query 38489 TG---AAGCGGAAGCCTTATTGATAGACTTCAATGAATCACCTGC---CTCAATAACAAC 38542
|| || | ||| ||| ||||| || | ||| | |||| ||||| | ||
Sbjct 522325 TGCACTAGTTGTAGC---ATTAATAGAGTT---TAAATTATCTGCACATTCAATTAACAC 522272
Query 38543 ACATGAACTAAACTGTCGAGTCGGAGTACGGCAACCAGCCATAATAGGAGTTGGCAATGA 38602
||| |||||||| || ||||| || || | || | |||||| || || || | ||
Sbjct 522271 ACAAGAACTAAATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGA 522212
Query 38603 AATCTGTCGAGTAGATACTGCTTCATAAAAACG 38635
|| | ||| || | ||| | |||||| ||
Sbjct 522211 TATTTTAAAAGTGGAAATTGCATTATAAAAGCG 522179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 539641734531920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |