Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_031030.1
Length=170788
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 174 2e-38
>seq129631
Length=630463
Score = 174 bits (192), Expect = 2e-38
Identities = 287/413 (69%), Gaps = 6/413 (1%)
Strand=Plus/Minus
Query 139466 CATCAAATCATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCC 139525
||| || | ||| | ||| ||| ||||||| | |||||| | | |||||||| | ||
Sbjct 522625 CATTAATTTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCC 522566
Query 139526 TTTGTTATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 139585
| | |||||||| ||||| | | |||||||| ||| | |||||| || || ||| || |
Sbjct 522565 TCTATTATTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAAC 522506
Query 139586 AGTAGCAGCGCCGCCACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATG 139645
||| || || || || | || |||||| || ||||| ||||| ||||| | || || ||
Sbjct 522505 AGTTGCGGCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTG 522446
Query 139646 TTTCCAAAAAGGAATAACACCAGTATGACGTACTTCACCCATGCCAATTTTAGAACCTTC 139705
||| ||||||||||| || |||||| | |||| || | | || | |||
Sbjct 522445 TTTATAAAAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAA 522386
Query 139706 AGCACGAATCATACCAACATTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAAT 139765
||| ||||| |||| | ||||| || ||||| || |||| ||| | ||||| |||||
Sbjct 522385 AGCTCGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAAT 522326
Query 139766 TG---AAGCGGAAGCCTTATTGATAGACTTCAATGAATCTCCTGCCTCAATAACGACGCA 139822
|| || | ||| ||| ||||| || || |||| | ||||| | || ||
Sbjct 522325 TGCACTAGTTGTAGC---ATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACA 522269
Query 139823 TGAACTAAACTGCCGAGTTGGAGTACGACAGCCAGCCATAATAGGAGTTGGTA 139875
|||||||| || |||||||| || | || | |||||| || || ||||
Sbjct 522268 AGAACTAAATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTA 522216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545375026710720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |