Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq14 114 2e-20 seq13 111 2e-19 >seq14 Length=755408349 Score = 114 bits (126), Expect = 2e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 || || ||||||| ||| | ||||| | ||| | || | ||||| |||| ||| || Sbjct 35287589 CCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAACATAGGAACAATCCCA 35287648 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 || ||||| ||||||||||| |||||| || ||| ||||||||||| || ||| Sbjct 35287649 TTGGATGTTCCATTTGTTCCTCGAATATAGCTCCCAATAGCACGAATATTGTGAACAGAA 35287708 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || |||||||| || |||| || | |||||| |||| || |||||||| Sbjct 35287709 ACACCAATTCCTCCAGCAGATTTACTTATGACAGCACATTCCTTCAGAGTATCATAGATT 35287768 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974 ||||| || || ||||| ||||| | ||| |||||||| Sbjct 35287769 CCCTCAATGCTGTCATCTTTCATGCAGATAAGGAAACAGCT 35287809 >seq13 Length=727576108 Score = 111 bits (122), Expect = 2e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 || || ||||||| ||| | ||||| | ||| | || | ||||| |||| ||| || Sbjct 79584465 CCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAACATAGGAACAATTCCA 79584524 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 || ||||| ||||||||||| || ||||| ||| |||||||| || || ||| Sbjct 79584525 TTGGATGTTCCATTTGTTCCTCGGATGTAACTCCCAGTAGCACGAATGTTGTGAACAGAG 79584584 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | ||| || ||||| || ||| ||| | |||||| |||| || |||||||| Sbjct 79584585 ACGCCAATCCCTCCAGCAGATTTGCTGATGACAGCACATTCCTTCAGAGTATCATAGATT 79584644 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974 ||||| || |||||||| ||||| | ||| |||||||| Sbjct 79584645 CCCTCGATGCTATCATCTTTCATGCAGATAAGGAAACAGCT 79584685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711605365514880