Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq14 114 2e-20
seq13 111 2e-19
>seq14
Length=755408349
Score = 114 bits (126), Expect = 2e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813
|| || ||||||| ||| | ||||| | ||| | || | ||||| |||| ||| ||
Sbjct 35287589 CCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAACATAGGAACAATCCCA 35287648
Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873
|| ||||| ||||||||||| |||||| || ||| ||||||||||| || |||
Sbjct 35287649 TTGGATGTTCCATTTGTTCCTCGAATATAGCTCCCAATAGCACGAATATTGTGAACAGAA 35287708
Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933
| || |||||||| || |||| || | |||||| |||| || ||||||||
Sbjct 35287709 ACACCAATTCCTCCAGCAGATTTACTTATGACAGCACATTCCTTCAGAGTATCATAGATT 35287768
Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974
||||| || || ||||| ||||| | ||| ||||||||
Sbjct 35287769 CCCTCAATGCTGTCATCTTTCATGCAGATAAGGAAACAGCT 35287809
>seq13
Length=727576108
Score = 111 bits (122), Expect = 2e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813
|| || ||||||| ||| | ||||| | ||| | || | ||||| |||| ||| ||
Sbjct 79584465 CCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAACATAGGAACAATTCCA 79584524
Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873
|| ||||| ||||||||||| || ||||| ||| |||||||| || || |||
Sbjct 79584525 TTGGATGTTCCATTTGTTCCTCGGATGTAACTCCCAGTAGCACGAATGTTGTGAACAGAG 79584584
Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933
| ||| || ||||| || ||| ||| | |||||| |||| || ||||||||
Sbjct 79584585 ACGCCAATCCCTCCAGCAGATTTGCTGATGACAGCACATTCCTTCAGAGTATCATAGATT 79584644
Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974
||||| || |||||||| ||||| | ||| ||||||||
Sbjct 79584645 CCCTCGATGCTATCATCTTTCATGCAGATAAGGAAACAGCT 79584685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 711605365514880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |