Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq129631 143 3e-29 >seq129631 Length=630463 Score = 143 bits (158), Expect = 3e-29 Identities = 300/447 (67%), Gaps = 0/447 (0%) Strand=Plus/Plus Query 151964 CGTTTTTATGAAGCAGTATCTACTCGACAGATTTCATTGCCAACTCCTATTATGGCTGGT 152023 || |||||| | ||| | || ||| | || || | || || || |||||| | || Sbjct 522179 CGCTTTTATAATGCAATTTCCACTTTTAAAATATCTCTACCCACACCGATTATGTCAGGA 522238 Query 152024 TGTCGTACTCCTACTCGACAGTTCAGTTCATGCGTTGTTATTGAGGCAGGAGATTCGCTG 152083 | || || ||||| || || ||||| || || | ||||| | |||| | Sbjct 522239 GTAAGAACACCAACTCGTCAATTTAGTTCTTGTGTGTTAATTGAATGTGCAGATAATTTA 522298 Query 152084 AAGTCTATCAATAAGGCTTCTGCTTCAATTGTTGAATATATCTCCAAACGAGCTGGAATC 152143 || ||||| ||| | || | ||||||| ||||| | || ||||||| ||||| Sbjct 522299 AACTCTATTAATGCTACAACTAGTGCAATTGTAAAATATGTTTCTCAACGAGCAGGAATA 522358 Query 152144 GGCATTAACGTTGGTATGATTCGTGCCGAAGGTTCTAAGATTGGCATGGGTGAAGTACGC 152203 |||||||||| |||| ||||| || ||| | || | | || |||| | Sbjct 522359 GGCATTAACGCTGGTCAAATTCGAGCTTTAGGAAGTCCTATCAGAAATGGAGAAGCATTT 522418 Query 152204 CATACTGGTGTTATTCCTTTTTGGAAACATTTTCAGACTGCTGTTAAATCATGCTCACAG 152263 ||||| || ||||||||||| ||||| || || | || || ||||| || || || Sbjct 522419 CATACCGGATGTATTCCTTTTTATAAACACTTCCAAAGCGCAGTAAAATCTTGTTCTCAA 522478 Query 152264 GGTGGAATTCGTGGCGGCGCTGCTACTGCTTATTATCCTATTTGGCATTTGGAAGTTGAA 152323 |||||| || | || || || || |||| || ||| || || |||||| | ||| ||||| Sbjct 522479 GGTGGAGTTAGAGGAGGGGCCGCAACTGTTTTTTACCCAATATGGCATCTAGAAATTGAA 522538 Query 152324 AATCTTCTCGTTTTGAAAAATAACAAAGGCGTAGAAGAAAACCGCATCCGTCATATGGAT 152383 ||| | | ||||| |||||||| | ||| | |||||||| | | |||||| | ||| Sbjct 522539 AATTTATTAGTTTTAAAAAATAATAGAGGAATTGAAGAAAATAGAGTACGTCATCTTGAT 522598 Query 152384 TATAGTGTTCAGCTGAATGATTTGATG 152410 ||| ||| || | ||| | || ||| Sbjct 522599 TATGCTGTACAAATTAATAAATTAATG 522625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545317534087200