Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_031090.1
Length=169621
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 150 2e-31
>seq129631
Length=630463
Score = 150 bits (166), Expect = 2e-31
Identities = 290/425 (68%), Gaps = 12/425 (3%)
Strand=Plus/Plus
Query 61678 CGTTTGAAACATATTATTCGTTTTTATGATGCCGTTTCTACTCATCAAGTTTCATTGCCT 61737
||| |||| ||||| || |||||| |||| |||| ||| | || | || | ||
Sbjct 522161 CGTATGAATTATATTCAGCGCTTTTATAATGCAATTTCCACTTTTAAAATATCTCTACCC 522220
Query 61738 ACTCCAATTATGGCAGGTGCTCGTACTCCGACTCGCCAGTTCTCTAGTTGTGTAGTTATT 61797
|| || |||||| |||| | | || || ||||| || || | |||||| | |||
Sbjct 522221 ACACCGATTATGTCAGGAGTAAGAACACCAACTCGTCAATTTAGTTCTTGTGTGTTAATT 522280
Query 61798 GAAGCCGGTGATTCGTTAAAATCTATTAAC---AAAACTTCAGCATCAATTATTGAATAT 61854
||| | ||| ||||| |||||||| | |||| ||| ||| | |||||
Sbjct 522281 GAATGTGCAGATAATTTAAACTCTATTAATGCTACAACTAGTGCA---ATTGTAAAATAT 522337
Query 61855 ATTTCTAAACGAGCTGGTATAGGTATCAACGTTGGTATGCTTCGTGC---AGAAGGTTCT 61911
||||| ||||||| || ||||| || |||| |||| |||| || || | || ||
Sbjct 522338 GTTTCTCAACGAGCAGGAATAGGCATTAACGCTGGTCAAATTCGAGCTTTAGGAAGTCCT 522397
Query 61912 AAGATCGGTATGGGCGAAGTTCGACATACGGGTGTTATTCCATTCTGGAAACATTTCCAA 61971
| || | | || |||| ||||| || |||||| || | ||||| ||||||
Sbjct 522398 A---TCAGAAATGGAGAAGCATTTCATACCGGATGTATTCCTTTTTATAAACACTTCCAA 522454
Query 61972 ACTGCAGTAAAATCTTGTTCTCAAGGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTAT 62031
| |||||||||||||||||||||||||| || | || || || || || | | |||
Sbjct 522455 AGCGCAGTAAAATCTTGTTCTCAAGGTGGAGTTAGAGGAGGGGCCGCAACTGTTTTTTAC 522514
Query 62032 CCGATGTGGCACTTAGAAGTAGAGAACCTATTAGTTCTGAAAAATAACAAAGGCGTGGAT 62091
|| || ||||| ||||| | || || |||||||| | |||||||| | ||| | ||
Sbjct 522515 CCAATATGGCATCTAGAAATTGAAAATTTATTAGTTTTAAAAAATAATAGAGGAATTGAA 522574
Query 62092 GAAAA 62096
|||||
Sbjct 522575 GAAAA 522579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541647588285840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |