Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq129631 127 2e-24 >seq129631 Length=630463 Score = 127 bits (140), Expect = 2e-24 Identities = 292/440 (66%), Gaps = 0/440 (0%) Strand=Plus/Plus Query 136355 CGTTTCTATGATGCAGTTTCTACTAAAAAGATTTCATTGCCAACACCAATTATGTCTGGT 136414 || || ||| ||||| |||| ||| || || || | || ||||| |||||||| || Sbjct 522179 CGCTTTTATAATGCAATTTCCACTTTTAAAATATCTCTACCCACACCGATTATGTCAGGA 522238 Query 136415 GTTCGTACTCCAACCCGCCAGTTCAGTTCATGCGTAGTTATTGAAGGTGGTGATAGTCTT 136474 || | || ||||| || || || ||||| || || | |||||| ||| |||| | | Sbjct 522239 GTAAGAACACCAACTCGTCAATTTAGTTCTTGTGTGTTAATTGAATGTGCAGATAATTTA 522298 Query 136475 AATTCAATTAACGAAGCCGCTGCATCAATTACGAAATACATTAGTAAGCGTGCTGGTATT 136534 || || ||||| | | || ||||| ||||| || | | || || || || Sbjct 522299 AACTCTATTAATGCTACAACTAGTGCAATTGTAAAATATGTTTCTCAACGAGCAGGAATA 522358 Query 136535 GGTATTAATGCGGGGATGATTCGTGCAGAAGGATCAAAAATTGGATTCGGTGAAGTCAAG 136594 || ||||| || || ||||| || |||| || || || |||| Sbjct 522359 GGCATTAACGCTGGTCAAATTCGAGCTTTAGGAAGTCCTATCAGAAATGGAGAAGCATTT 522418 Query 136595 CATACTGGTGTTATTCCTTTCTGGAAACACTTCCAAACCGCAGTTAAGTCATGCTCCCAA 136654 ||||| || ||||||||| | ||||||||||||| |||||| || || || || ||| Sbjct 522419 CATACCGGATGTATTCCTTTTTATAAACACTTCCAAAGCGCAGTAAAATCTTGTTCTCAA 522478 Query 136655 GGCGGAGTCCGTGGTGGTGCAGCTACACTGTATTATCCGATGTGGCACTTGGAAGTTGAA 136714 || ||||| | || || || || || | | ||| || || ||||| | ||| ||||| Sbjct 522479 GGTGGAGTTAGAGGAGGGGCCGCAACTGTTTTTTACCCAATATGGCATCTAGAAATTGAA 522538 Query 136715 AACCTCCTCGTACTTAAGAACAACAAAGGTGTAGATGAAAACCGTATTCGCCATTTAGAT 136774 || | | || | || || || | ||| | || ||||| | | || ||| | ||| Sbjct 522539 AATTTATTAGTTTTAAAAAATAATAGAGGAATTGAAGAAAATAGAGTACGTCATCTTGAT 522598 Query 136775 TATGGTGTTCAGATTAATAA 136794 |||| ||| || |||||||| Sbjct 522599 TATGCTGTACAAATTAATAA 522618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538891136391520