Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_031095.1
Length=168758
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 127 2e-24
>seq129631
Length=630463
Score = 127 bits (140), Expect = 2e-24
Identities = 292/440 (66%), Gaps = 0/440 (0%)
Strand=Plus/Plus
Query 136355 CGTTTCTATGATGCAGTTTCTACTAAAAAGATTTCATTGCCAACACCAATTATGTCTGGT 136414
|| || ||| ||||| |||| ||| || || || | || ||||| |||||||| ||
Sbjct 522179 CGCTTTTATAATGCAATTTCCACTTTTAAAATATCTCTACCCACACCGATTATGTCAGGA 522238
Query 136415 GTTCGTACTCCAACCCGCCAGTTCAGTTCATGCGTAGTTATTGAAGGTGGTGATAGTCTT 136474
|| | || ||||| || || || ||||| || || | |||||| ||| |||| | |
Sbjct 522239 GTAAGAACACCAACTCGTCAATTTAGTTCTTGTGTGTTAATTGAATGTGCAGATAATTTA 522298
Query 136475 AATTCAATTAACGAAGCCGCTGCATCAATTACGAAATACATTAGTAAGCGTGCTGGTATT 136534
|| || ||||| | | || ||||| ||||| || | | || || || ||
Sbjct 522299 AACTCTATTAATGCTACAACTAGTGCAATTGTAAAATATGTTTCTCAACGAGCAGGAATA 522358
Query 136535 GGTATTAATGCGGGGATGATTCGTGCAGAAGGATCAAAAATTGGATTCGGTGAAGTCAAG 136594
|| ||||| || || ||||| || |||| || || || ||||
Sbjct 522359 GGCATTAACGCTGGTCAAATTCGAGCTTTAGGAAGTCCTATCAGAAATGGAGAAGCATTT 522418
Query 136595 CATACTGGTGTTATTCCTTTCTGGAAACACTTCCAAACCGCAGTTAAGTCATGCTCCCAA 136654
||||| || ||||||||| | ||||||||||||| |||||| || || || || |||
Sbjct 522419 CATACCGGATGTATTCCTTTTTATAAACACTTCCAAAGCGCAGTAAAATCTTGTTCTCAA 522478
Query 136655 GGCGGAGTCCGTGGTGGTGCAGCTACACTGTATTATCCGATGTGGCACTTGGAAGTTGAA 136714
|| ||||| | || || || || || | | ||| || || ||||| | ||| |||||
Sbjct 522479 GGTGGAGTTAGAGGAGGGGCCGCAACTGTTTTTTACCCAATATGGCATCTAGAAATTGAA 522538
Query 136715 AACCTCCTCGTACTTAAGAACAACAAAGGTGTAGATGAAAACCGTATTCGCCATTTAGAT 136774
|| | | || | || || || | ||| | || ||||| | | || ||| | |||
Sbjct 522539 AATTTATTAGTTTTAAAAAATAATAGAGGAATTGAAGAAAATAGAGTACGTCATCTTGAT 522598
Query 136775 TATGGTGTTCAGATTAATAA 136794
|||| ||| || ||||||||
Sbjct 522599 TATGCTGTACAAATTAATAA 522618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 538891136391520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |