Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_031924.1 Length=47564 Score E Sequences producing significant alignments: (Bits) Value seq129631 107 6e-19 >seq129631 Length=630463 Score = 107 bits (118), Expect = 6e-19 Identities = 179/256 (70%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 36521 CCATTTACGAGTACGAAGCTGGCCTTCGATGTAAACCTGCGAACCTTTTCGAAGGTATTC 36580 |||||| | ||| |||| ||||| || || || || |||||||||| | ||||| Sbjct 140918 CCATTTTCTAGTTTGAAGGGATCCTTCAATATATACTTGAGAACCTTTTCTCAAATATTC 140859 Query 36581 TCCTGCAACTTCCGCAAGTTTCCCGAATATGACAATACGATGCCACTCTGTCTGTTCTTT 36640 ||| |||| ||| || | ||| || |||| || || | |||||| ||||| | ||||| Sbjct 140858 TCCAGCAATTTCAGCCAATTTTCCAAATAATACTATTCTATGCCATTCTGTTTTCTCTTT 140799 Query 36641 CTTTTCTCCTGTCTGCTTATCTTTCCACTGCTCAGATGTTGCAACGGAAATGTTGACAAT 36700 ||||| || || | ||||||||||| | ||| || ||||||| | || || || | Sbjct 140798 ATTTTCACCAGTATTTTTATCTTTCCAGTTCTCTGAAGTTGCAAGTGTCATATTTACTAC 140739 Query 36701 TGCAGAACCTGATGCTGAATATTTAACTTCAGGGTCGTTTCCGAGAGT-TCCGACAATAA 36759 |||| ||| || ||| ||||||||| || | || | ||| || | | | Sbjct 140738 TGCATTACCATTTGGCATATAACGAACTTCAGGATCTTGGCCTA-AGTGACCAATTAAGA 140680 Query 36760 TTACTTTATTTACGCC 36775 ||||||||||||| || Sbjct 140679 TTACTTTATTTACACC 140664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151813865785608