Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_031924.1
Length=47564
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 107 6e-19
>seq129631
Length=630463
Score = 107 bits (118), Expect = 6e-19
Identities = 179/256 (70%), Gaps = 2/256 (1%)
Strand=Plus/Minus
Query 36521 CCATTTACGAGTACGAAGCTGGCCTTCGATGTAAACCTGCGAACCTTTTCGAAGGTATTC 36580
|||||| | ||| |||| ||||| || || || || |||||||||| | |||||
Sbjct 140918 CCATTTTCTAGTTTGAAGGGATCCTTCAATATATACTTGAGAACCTTTTCTCAAATATTC 140859
Query 36581 TCCTGCAACTTCCGCAAGTTTCCCGAATATGACAATACGATGCCACTCTGTCTGTTCTTT 36640
||| |||| ||| || | ||| || |||| || || | |||||| ||||| | |||||
Sbjct 140858 TCCAGCAATTTCAGCCAATTTTCCAAATAATACTATTCTATGCCATTCTGTTTTCTCTTT 140799
Query 36641 CTTTTCTCCTGTCTGCTTATCTTTCCACTGCTCAGATGTTGCAACGGAAATGTTGACAAT 36700
||||| || || | ||||||||||| | ||| || ||||||| | || || || |
Sbjct 140798 ATTTTCACCAGTATTTTTATCTTTCCAGTTCTCTGAAGTTGCAAGTGTCATATTTACTAC 140739
Query 36701 TGCAGAACCTGATGCTGAATATTTAACTTCAGGGTCGTTTCCGAGAGT-TCCGACAATAA 36759
|||| ||| || ||| ||||||||| || | || | ||| || | | |
Sbjct 140738 TGCATTACCATTTGGCATATAACGAACTTCAGGATCTTGGCCTA-AGTGACCAATTAAGA 140680
Query 36760 TTACTTTATTTACGCC 36775
||||||||||||| ||
Sbjct 140679 TTACTTTATTTACACC 140664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151813865785608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |