Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_031928.1
Length=169936
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 156 5e-33
>seq129631
Length=630463
Score = 156 bits (172), Expect = 5e-33
Identities = 269/388 (69%), Gaps = 2/388 (1%)
Strand=Plus/Minus
Query 143390 CATAGTCCATATGACGAATACGGTTCTCATCGACACCCTTGTTGTTTTTCAGAACGAGCA 143449
|||| || | |||||| | | || || || | || | || ||||| | ||| | |
Sbjct 522602 CATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATTTTTTAAAACTAATA 522543
Query 143450 GATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGGATTC 143509
|||||||| ||| | |||||| || || ||| || |||| || || || || | | ||
Sbjct 522542 AATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGCCCCTCCTCTAACTC 522483
Query 143510 CACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCGG 143569
||||||| ||||| ||||| || || | ||||| ||||| | || |||||| ||||
Sbjct 522482 CACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAAAAAGGAATACATCCGG 522423
Query 143570 TATGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGA 143629
|||| |||| || | | ||| || ||| ||| ||||| |||| |||| |
Sbjct 522422 TATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGAATTTGACCAGCGTTAA 522363
Query 143630 TACCAATACCGGCACGTTTAGAAATGTATTCAATTATTGAGTTAGCAGTTTTGTTAATAG 143689
| || || || || |||| ||||| |||| | |||| ||| || |||||||
Sbjct 522362 TGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTAGTTGTAGCATTAATAG 522303
Query 143690 A-TTTCAGTGAGTCGCCTGCTTCAATAACCACACAAGAACTAAATTGACGGGTTGGTGTA 143748
| ||| | | | || | |||||| | ||||||||||||||||||||| ||||||||
Sbjct 522302 AGTTTAAATTA-TCTGCACATTCAATTAACACACAAGAACTAAATTGACGAGTTGGTGTT 522244
Query 143749 CGTGCTCCAGCCATAATAGGAGTTGGTA 143776
| | |||| | |||||| || || ||||
Sbjct 522243 CTTACTCCTGACATAATCGGTGTGGGTA 522216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542653709197440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |