Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_031934.1
Length=168929
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 152 6e-32
>seq129631
Length=630463
Score = 152 bits (168), Expect = 6e-32
Identities = 240/344 (70%), Gaps = 0/344 (0%)
Strand=Plus/Minus
Query 142512 TTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTA 142571
|| ||||| | ||| | | |||||||| ||| | |||||| || || ||| || ||||
Sbjct 522561 TTATTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTT 522502
Query 142572 GCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTC 142631
|| || || || | | ||||||||| ||||| ||||| || || | ||||| |||||
Sbjct 522501 GCGGCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTA 522442
Query 142632 CAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGCA 142691
| || |||||| |||||||| |||| || | | ||| || ||| |||
Sbjct 522441 TAAAAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCT 522382
Query 142692 CGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTATTGAG 142751
||||| |||| |||| || || || ||||| |||| ||||| |||| | ||||
Sbjct 522381 CGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCA 522322
Query 142752 TTAGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCGGCTTCAATAACCACACAAGAACTA 142811
||| || |||||||| || | || | |||||| | |||||||||||||
Sbjct 522321 CTAGTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTA 522262
Query 142812 AATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTAGG 142855
|||||||| |||||||| | | |||| | |||||| || || ||
Sbjct 522261 AATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGG 522218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 539437316314960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |