Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_031934.1 Length=168929 Score E Sequences producing significant alignments: (Bits) Value seq129631 152 6e-32 >seq129631 Length=630463 Score = 152 bits (168), Expect = 6e-32 Identities = 240/344 (70%), Gaps = 0/344 (0%) Strand=Plus/Minus Query 142512 TTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTA 142571 || ||||| | ||| | | |||||||| ||| | |||||| || || ||| || |||| Sbjct 522561 TTATTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTT 522502 Query 142572 GCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTC 142631 || || || || | | ||||||||| ||||| ||||| || || | ||||| ||||| Sbjct 522501 GCGGCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTA 522442 Query 142632 CAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGCA 142691 | || |||||| |||||||| |||| || | | ||| || ||| ||| Sbjct 522441 TAAAAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCT 522382 Query 142692 CGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTATTGAG 142751 ||||| |||| |||| || || || ||||| |||| ||||| |||| | |||| Sbjct 522381 CGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCA 522322 Query 142752 TTAGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCGGCTTCAATAACCACACAAGAACTA 142811 ||| || |||||||| || | || | |||||| | ||||||||||||| Sbjct 522321 CTAGTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTA 522262 Query 142812 AATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTAGG 142855 |||||||| |||||||| | | |||| | |||||| || || || Sbjct 522261 AATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGG 522218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539437316314960