Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_031946.1 Length=40443 Score E Sequences producing significant alignments: (Bits) Value seq129631 118 3e-22 >seq129631 Length=630463 Score = 118 bits (130), Expect = 3e-22 Identities = 229/337 (68%), Gaps = 1/337 (0%) Strand=Plus/Minus Query 26646 CATTTGCATGGTTCCACCAACGCCAACGATGACTTCGGTAGTGAACCGATCCTGTCTGCT 26705 ||||||||| || || |||| | ||| || | ||| || || | || || | | | Sbjct 140987 CATTTGCATCGTACCGCCAATGTTAACTATAATTTCTGTTGTATAACGTTCAAGACCATT 140928 Query 26706 TTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAACCTTTTCG 26765 ||| || ||||||||||| || | | ||||||| ||| || | ||||||||||| Sbjct 140927 TTGGTCTTGCCATTTTCTAGTTTGAAGGGATCCTTCAATATATACTTGAGAACCTTTTCT 140868 Query 26766 CAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACACGGTGCCACTCCGT 26825 || ||| || | |||||||| |||| ||| || | ||| | | ||||| || || Sbjct 140867 CAAATATTCTCCAGCAATTTCAGCCAATTTTCCAAATAATACTATTCTATGCCATTCTGT 140808 Query 26826 CTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGCAACTGTAAG 26885 | ||| || | || ||||| | ||||| ||| | ||||| || |||| ||| | Sbjct 140807 TTTCTCTTTATTTTCACCAGTATTTTTATCTTTCCAGTTCTCTGAAGTTGCAAGTGTCAT 140748 Query 26886 GTTTGCAAATGCCGTTCCTGATGGGTGAATATCTGATTTCTGGATCATGCCCAAGGCGAC 26945 ||| | | || | || | | || ||| | | ||| ||||| || || | | ||| Sbjct 140747 ATTTACTACTG-CATTACCATTTGGCATATAACGAACTTCAGGATCTTGGCCTAAGTGAC 140689 Query 26946 CAATAATGATCACCTTATTTACGCCTCTGCTTGCCAT 26982 |||| | ||| || |||||||| ||||| |||||||| Sbjct 140688 CAATTAAGATTACTTTATTTACACCTCTACTTGCCAT 140652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129067021147740