Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_031946.1
Length=40443
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 118 3e-22
>seq129631
Length=630463
Score = 118 bits (130), Expect = 3e-22
Identities = 229/337 (68%), Gaps = 1/337 (0%)
Strand=Plus/Minus
Query 26646 CATTTGCATGGTTCCACCAACGCCAACGATGACTTCGGTAGTGAACCGATCCTGTCTGCT 26705
||||||||| || || |||| | ||| || | ||| || || | || || | | |
Sbjct 140987 CATTTGCATCGTACCGCCAATGTTAACTATAATTTCTGTTGTATAACGTTCAAGACCATT 140928
Query 26706 TTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAACCTTTTCG 26765
||| || ||||||||||| || | | ||||||| ||| || | |||||||||||
Sbjct 140927 TTGGTCTTGCCATTTTCTAGTTTGAAGGGATCCTTCAATATATACTTGAGAACCTTTTCT 140868
Query 26766 CAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACACGGTGCCACTCCGT 26825
|| ||| || | |||||||| |||| ||| || | ||| | | ||||| || ||
Sbjct 140867 CAAATATTCTCCAGCAATTTCAGCCAATTTTCCAAATAATACTATTCTATGCCATTCTGT 140808
Query 26826 CTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGCAACTGTAAG 26885
| ||| || | || ||||| | ||||| ||| | ||||| || |||| ||| |
Sbjct 140807 TTTCTCTTTATTTTCACCAGTATTTTTATCTTTCCAGTTCTCTGAAGTTGCAAGTGTCAT 140748
Query 26886 GTTTGCAAATGCCGTTCCTGATGGGTGAATATCTGATTTCTGGATCATGCCCAAGGCGAC 26945
||| | | || | || | | || ||| | | ||| ||||| || || | | |||
Sbjct 140747 ATTTACTACTG-CATTACCATTTGGCATATAACGAACTTCAGGATCTTGGCCTAAGTGAC 140689
Query 26946 CAATAATGATCACCTTATTTACGCCTCTGCTTGCCAT 26982
|||| | ||| || |||||||| ||||| ||||||||
Sbjct 140688 CAATTAAGATTACTTTATTTACACCTCTACTTGCCAT 140652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 129067021147740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |