Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq75855 174 6e-39 >seq75855 Length=31220 Score = 174 bits (192), Expect = 6e-39 Identities = 321/468 (69%), Gaps = 2/468 (0%) Strand=Plus/Plus Query 10604 CATGCATCTGTCGATTGATTCGCTTAAAGAAGCTGGCGCCTTCACTGGGGCTCCTATCGA 10663 |||| | ||| | | ||||| || ||| || | ||||| ||||| || |||| | || Sbjct 6163 CATGAAACTGACACTCGATTCACTAAAAAAATCCGGCGCATTCACAGGTCGTCCTGTGGA 6222 Query 10664 GAAAGAGATCACCTGGAAACAGGGCGATAAGGAACTGACTGCAACCGTGTACGTCCGGCC 10723 ||| | ||||||||||| ||| | || | ||| | | || || |||| | |||| || Sbjct 6223 AAAACAAATCACCTGGAAGCAGCGTAATGAAGAATTAAGAGCCACGGTGTTCATCCGACC 6282 Query 10724 CTTGTCGTACAGCACAGCTGTTTCTGACCTTCTGG-CCATGAATGGCAAGGTGGATGGGG 10782 ||| ||| || || |||||| | |||| ||||| |||||||| || || Sbjct 6283 GTTGGGTTACCACAGCGCCACATCTGACGTACTGGCCCATG-TGGGCAAGGTTGACGGCA 6341 Query 10783 TAGCGGGTCGGATAGCCGCGTCAATCGTGGATGAAGAGGGTAAGCCGGTATTCACGCCGG 10842 | || || || || || || ||| |||||||| || | ||||| |||||||| Sbjct 6342 TTGCCGGGCGTATCGCAGCCAGCATCTGTGATGAAGATGGCCACCCGGTCTTCACGCCTC 6401 Query 10843 CAGATATCACCGGCGAGGCCGATCCCGGTCGCGGCGCGCTGGATGGAAACCTGACCATCG 10902 ||||| || |||||||| || |||| |||||||||||| ||||| ||||| |||| Sbjct 6402 AGGATATTACTGGCGAGGCTGACCCCGATCGCGGCGCGCTTGATGGCGCACTGACTATCG 6461 Query 10903 CCCTGCTCACCGTGATCGCCGAGGTGAACAACCTGGGAAAGACGACCAGCTCAGCGAACT 10962 | || || | || ||||||||| | ||||||||||| |||| ||||||| Sbjct 6462 CGCTCCTGGTTGCCATTCAGGAGGTGAACGATCTGGGAAAGACCACCAACTCAGCGCCGA 6521 Query 10963 AGATGAGGTGTGGCATGAGCTGGTGATGTGCGGGATTGGCGGCAGAACCATCGCAGAAGC 11022 ||| || | ||| ||||| || | || || ||||| ||||||||||| ||||| Sbjct 6522 AGACGAATTCTGGTGCGAGCTCGTCCTCAATGGAATCGGCGGAAGAACCATCGCCGAAGC 6581 Query 11023 CAAGTCGCGTCTCACCTACCGGGAGTTCCTGAGCTGGTGCAAGTTCCG 11070 || |||| || |||||||| || | |||| |||| ||| Sbjct 6582 CAGAGAAAACCTCAGCTTCCGGGAGTACCAGCTCTGGGTTAAGTACCG 6629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179371897197576