Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02]
499,221 sequences; 3,747,047,519 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq248630 86.0 5e-12
seq189152 82.4 6e-11
seq70284 82.4 6e-11
>seq248630
Length=92124
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| || | | ||||| |||| ||| ||| || || | |||||||| |
Sbjct 18043 CCACCACGGAGACGGAGAACCAAGTGGAGGGTGGACTCTTTCTGAATGTTGTAATCAGCA 18102
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || || | || || | ||| ||||||||||| ||||| ||||| || || | ||
Sbjct 18103 AGAGTGTGTCCATCCTCAAGTTGCTTGCCGGCAAATATCAACCGCTGCTGGTCTGGGGGG 18162
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| || || || || |||| | ||||||| || ||| || ||| || ||| ||
Sbjct 18163 ATGCCCTCCTTGTCTTGGATCTTCACTTTGACATTGTCAATCGTATCGGAAGACTCAACC 18222
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || || || || |||| || || |||||||| ||||||||
Sbjct 18223 TCGAGGGTGATGGTCTTGTCGGTGAGGGTCTTCACAAAGATTTGCAT 18269
>seq189152
Length=79535
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
||| ||||| || | | || | ||| | ||| |||||| || | |||||||| |
Sbjct 37546 GCCACCACGGAGACGGAGGACTAGATGAAAAGTAGACTCCTTCTGAATGTTGTAATCAGC 37605
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
||||||||| | || || | || ||||| || || || | | ||||||||| | ||
Sbjct 37606 CAATGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGCCTCTGTTGATCTGGTGG 37665
Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| ||| || || || |||| | ||||| || | | ||| | | ||| ||
Sbjct 37666 GATACCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCGATGGTGCCCGAACTCTCAAC 37725
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||| ||||| || || ||||| |||||||||||||| || |||||
Sbjct 37726 CTCTAGAGTTATGGTCTTCCCGGTAAGAGTTTTCACAAAGATCTGCAT 37773
>seq70284
Length=100422
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
||| |||||||| | | ||| | |||| ||| |||||| || | |||||| ||||
Sbjct 35670 GCCACCACGCAGGCGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGC 35729
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
| ||||| | || |||| || ||||| ||||| |||| ||||| || || | ||
Sbjct 35730 GAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGG 35789
Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060
| || || || || |||| | ||||| || | | |||||| ||| ||| |
Sbjct 35790 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATTGTGTCAG-AGCTCTCAA 35848
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| || | || || || || ||||| || || ||||||||||| |||||
Sbjct 35849 CCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 35897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379049249746818
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |