Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_004629.1 Length=280334 Score E Sequences producing significant alignments: (Bits) Value seq462907 116 7e-21 seq286911 93.3 8e-14 seq189010 87.8 3e-12 >seq462907 Length=336 Score = 116 bits (128), Expect = 7e-21 Identities = 78/87 (90%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 272863 GCTAGTATATGGTGGGCCCAGCAGGACTTGAACCTGCGACCAAGCGATTATGAGTCGCCT 272922 |||| || |||||| |||||| ||||||||||| ||||||||||||||||||||||| | Sbjct 13 GCTAAAATCTGGTGGCCCCAGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCGT 72 Query 272923 GCTCTAACCAACTGAGCTATAGGCCCT 272949 |||||||||||||||||||| || ||| Sbjct 73 GCTCTAACCAACTGAGCTATGGGGCCT 99 >seq286911 Length=6367 Score = 93.3 bits (102), Expect = 8e-14 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 272869 ATATGGTGGGCCCAGCAGGACTTGAACCTGCGACCAAGCGATTATGAGTCGCCTGCTCTA 272928 || |||||| ||| || || ||||||| ||||||||||||||||||||||||||||||| Sbjct 5712 ATTTGGTGGCCCCTGCTGGGTTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTA 5771 Query 272929 ACCAACTGAGCTA 272941 ||| ||||||||| Sbjct 5772 ACC-ACTGAGCTA 5783 >seq189010 Length=996 Score = 87.8 bits (96), Expect = 3e-12 Identities = 72/85 (85%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 272875 TGGGCCCAGCAGGACTTGAACCTGCGACCAAGCGATTATGAGTCGCCTGCTCTAACCAAC 272934 ||| || || ||| ||||||| |||||||||||||||||||||||||||||| ||| || Sbjct 777 TGGCCCTTGCTGGATTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTGACC-AC 835 Query 272935 TGAGCTATAGGCCCTTTTTATTTAT 272959 ||||||| ||| || | ||||||| Sbjct 836 TGAGCTAAAGGGCC-ATATATTTAT 859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 891343653961040