Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_004745.1 Length=30728 Score E Sequences producing significant alignments: (Bits) Value seq248802 753 0.0 seq129892 504 1e-138 >seq248802 Length=12257 Score = 753 bits (834), Expect = 0.0 Identities = 1233/1757 (70%), Gaps = 71/1757 (4%) Strand=Plus/Plus Query 16448 AACCACGGAGT-TAA-ACGGATGAGTGACTATCATCATGGCGTGCAGGTGCTGGAGATTA 16505 ||||||||||| ||| | |||| | | ||||| || ||||| | || | || || | Sbjct 2052 AACCACGGAGTGTAATAAAGATGGCTAATTATCACCACGGCGTACGCGTCGTTGAAATCA 2111 Query 16506 ACGACGGCACCCGCGTCATTTCCACCGTATCCACTGCCATTGTCGGCATGGTCTGCACGG 16565 | ||||| |||||| |||||||| |||||||| | |||||||||||||||||||| | Sbjct 2112 ATGACGGAACCCGCAGTATTTCCACGGTATCCACCTCTATTGTCGGCATGGTCTGCACTG 2171 Query 16566 CCAGCG-ATGCGGATGCGGAAACC---TTCCCTCTCAATAAACCGGTGCTGATTACCAAT 16621 | |||| |||| ||||| ||| ||||| ||||| | ||||||||||||||| | Sbjct 2172 C-AGCGGATGCTGATGCC---ACCGTATTCCCGCTCAACACGCCGGTGCTGATTACCGAC 2227 Query 16622 GTGCAGAGCGCAATTGCAAAGGCCGGTAAAAAAGGCACGCTGGCGGCGTCGTTACAGGCC 16681 |||||| || | | || |||||| | |||||||||||| || | ||||| Sbjct 2228 GTGCAGGCGGCGGTGGGGAAAGCCGGTGTCAGCGGCACGCTGGCGAAAGCGCTGCAGGCG 2287 Query 16682 ATCGCTGACCAGTCAAAACCGGTCACCGTTGTTGTGCGCGTGGAAGACGGCACCGGCGAC 16741 || || |||||| || ||||| || || || |||||||| || || || | ||| Sbjct 2288 ATTGCCGACCAGAGCAAGCCGGTAACGGTGGTGGTGCGCGTTGAGGAGGGT---GAAGAC 2344 Query 16742 GACGAGGAAACGAAACTCGCGCAGACTGTTTCCAATATTATCGGCACCACCGACGAAAAC 16801 || | || ||| | ||| |||||| |||||| || ||| | ||| Sbjct 2345 GAAGCGGCAACCAC-------CAG--------CAATATCATCGGCGGCAGCGATGCTAAC 2389 Query 16802 GGTCAGTACACCGGACTGAAAGCCCTGATGGGGGCTGAGTCGGTTACC--GGCGTTAAAC 16859 || | |||||||| ||||||| ||| | | ||| || | | ||| |||||||| | Sbjct 2390 GGCCGCTACACCGGGATGAAAGCGCTGCTCGCGGCGCAGACCG--ACCTTGGCGTTAAGC 2447 Query 16860 CGCGCATTCTCGGCGTACCGGGACTGGACACCAAAGAGGTCGCCGTCGCACTGGCATCGG 16919 |||| ||||||||||| ||||| ||||| | || || ||| ||| ||||| | Sbjct 2448 CGCGTATTCTCGGCGTGCCGGGGCTGGATTCGCTGGAAGTGGCCACCGCGCTGGCGGCAA 2507 Query 16920 TATGCCAGGAACTGAATGCCTTCGGGTATATCAGCGCATGGGGTTGTAAAACCATTTCCG 16979 | |||||| | ||| |||||||| |||||| || | || |||||||| | || Sbjct 2508 TCTGCCAGCAGCTGCGCGCCTTCGGCTATATCTCGGCTTACGGCTGTAAAACGGTAAGCG 2567 Query 16980 AGGTGA--AAGCCTACCGCCAGAATTTCAGCCAGCGTGAGCTGATGGTTATCTGGCCGGA 17037 | | | ||| || ||| | || ||||||||||| ||||||||||| |||||||| || Sbjct 2568 ATGCGCTCAAG--TATCGCGAAAACTTCAGCCAGCGCGAGCTGATGGTGATCTGGCCCGA 2625 Query 17038 TTTCCTCGCATGGGATACGGTTACCAGTACCACCGCCACCGCGTATGCCACCGCTCGTGC 17097 || |||| ||| | || || ||||| | | | || || ||||||||||| || || Sbjct 2626 CTTTGTCGCCTGGAACACCGTGACCAGCGCGGCGGAAACTGCCTATGCCACCGCCCGCGC 2685 Query 17098 GCTGGGTCTGCGCGCTAAAATCGACCAGGAGCAG-GGCTGGCATAAAACGCTGTCCAACG 17156 || || |||||||| |||||||| | || ||| |||||||||||||| ||||| |||| Sbjct 2686 CCTCGGCCTGCGCGCCAAAATCGATAACGA-CAGCGGCTGGCATAAAACCCTGTCGAACG 2744 Query 17157 TCGGGGTGAACGGTGTTACCGGCATCAGTGCATCCGTCTTCTGGGATTTGCAGAAGCCAG 17216 |||| || ||||| || |||||| | || || || |||||||| ||||| || | Sbjct 2745 TCGGCGTCAACGGCGTGACCGGCGTTTCCGCCTCGGTATTCTGGGACCTGCAGCAGGTGG 2804 Query 17217 GCACTGATGCTGACCTGCTGAACGAGGCAGGCGTCACAACGCTGGTTCGCCGCGACGGTT 17276 | || ||||| || |||||||| || || ||||||| |||||| | ||| ||||||| Sbjct 2805 GGACCGATGCCGATCTGCTGAATGAAGCCAGCGTCACCACGCTGATCCGCAAAGACGGTT 2864 Query 17277 TTCGTTTCTGGGGTAACCGTACCTGCTCTGATGACCCGCTGTTCCTCTTTGAAAGCTACA 17336 | || |||||||| ||||| ||||| ||||||||||||||| |||||||| || || Sbjct 2865 TCCGCTTCTGGGGCAACCGCACCTGTAGCGATGACCCGCTGTTCGCCTTTGAAAACTTCA 2924 Query 17337 CACGCACCGCGCAGGTACTGGCCGACACGATGGCTGAGGCGCACATGTGGGCTATTGATA 17396 | ||| | |||||||| | |||||||| ||||| || ||||| |||||||| | || | Sbjct 2925 CCCGCTCGGCGCAGGTGATCGCCGACACCATGGCCGATGCGCATATGTGGGCCAACGACA 2984 Query 17397 AGCCCATCACCGCAACGCTGATTCGCGACATCATTGACGGCATCAATGCCAAATTCCGTG 17456 |||| | || | |||||| | |||||||| || | ||| ||||| ||||| ||||||| Sbjct 2985 AGCCGCTGACGCCGACGCTGGTGCGCGACATTATCGCCGGGATCAACGCCAAGTTCCGTG 3044 Query 17457 AACTGAAAAACAACGGTTATATCGTGGATGGCACATGCTGGTTCAGCGAAGAATCCAACG 17516 | |||| ||| ||||||| | ||| | || ||||||| | |||| ||||| Sbjct 3045 AGCTGATCAACGCCGGTTATCTGCTGGGCGCCAACTGCTGGTACGACGAAAGCGCCAACA 3104 Query 17517 ATGCGGAAACCCTCAAGGCCGGAAAACTGTATATCGACTACGACTATACCCCGGTGCCTC 17576 ||| | ||| || ||||| || |||||||||||||||||||||||||||||||| | Sbjct 3105 GCCAGGAGAGCCTGAAAGCCGGCAAGCTGTATATCGACTACGACTATACCCCGGTGCCGC 3164 Query 17577 CTCTCGAAAACCTGACCCTGCGCCAGCGTATTACTTCCAGATACCTGGCAAGTCTGGTCA 17636 | || ||| | ||||||||||| ||||| ||||| ||| |||||||| | | | | Sbjct 3165 CGCTGGAAGATCTGACCCTGCGTCAGCGCATTACCGACAGCTACCTGGCGAACTTCGCCG 3224 Query 17637 CTTCGGTTAACAGCAATTAAGGAGCCTGACCGATGGCAATGCCGCGCAAACTCAAGTTAA 17696 |||| || |||||| ||||||| | |||||| |||| ||||| || | Sbjct 3225 CTTCTGTGAACAGC---TAAGGAGAAACCCTCATGGCACTGCCTAAGAAACTGAAATACC 3281 Query 17697 TGAACGTCTTTCTGAACGGCTACAGCTATCAGGGCGTTGCAAAGTCCGTCACGCTGCCAA 17756 |||| | ||| | | | ||||||||||||| || | | || | |||||||| | Sbjct 3282 TGAATTTGTTTAACGATGCCAACAGCTATCAGGGTGTGGTGACCTCACTGACGCTGCCGA 3341 Query 17757 AACTGACCCGTAAGCTCGAAAACTATCGCGGTGCGGGGATGAACGGCAGCGCACCGGTAG 17816 | ||| | || |||||||| || ||||| | || ||||||||| || | | | Sbjct 3342 AGCTGGCGCGCAAGCTCGACCCTTACCGCGGCGGCGGCATGAACGGCGTGGCGCATATCG 3401 Query 17817 ACCTCGGCCTTGATGATGATGCTCTGTCAATGGAGTGGTCGCTCGGTGGATTCCCGGATT 17876 | ||||| || |||||||| ||| |||||||| | || |||| | Sbjct 3402 ATAATGGCCTGGAAGATGATGCGCTGGATCTGGAGTGGAC--------CATCTCCGGCCT 3453 Query 17877 CGGTTATCTGGGAGCTTTACGCTGCAACCAGT--GCTGATGCC---GTACCGATTCGTTT 17931 || | | || | |||| | ||||| | || ||| || ||| | || || Sbjct 3454 CGACGACC-----GCGT---GCTG-AGCCAGTGGGGTGGCGCCACGGTGCCGCTGCGCTT 3504 Query 17932 TGCTGGTTCTTACCAGCGCGACGATACCGGCGAAACGGTGGCCGTCGAAGTGGTCATGCG 17991 | ||||| |||||||| ||||| |||| ||| || | || || || |||| |||| Sbjct 3505 TATGGGTTCCTACCAGCGTGACGACACCGACGAGACCATCGCGGTGGAGGTGGAGCTGCG 3564 Query 17992 TGG---GCGTCAGAAAGAAGTCGATACCGGAGAGGGTAAACAGGGAGAGGATACCGAATC 18048 || || |||| | |||| ||| ||| | || ||||| ||||| | |||| | Sbjct 3565 CGGCAAGCATCAG---CAGTTCGACTTCGGCGAGAGCAAGCAGGGTGAGGAGAACGAAAC 3621 Query 18049 GAAACTCCCGGTGATTTGTACTTATTTCAAGTTGACGATGG-ACGGTAAGGAGCTGGTCG 18107 ||| || | | || || || | |||| ||| | ||| |||| || | |||| | | Sbjct 3622 CAAAATCACCACCAAATGCACCTACTACAAGCTGA-GCTGGAACGGCAAAGCGCTGATTG 3680 Query 18108 AAATCGACACCATCAACATGATTGAGAAGGTGAACGGCGTCGACCGGCTGGAGCAACACC 18167 | ||||||||| |||||||| | |||| ||||||||| ||||||| |||| | |||| Sbjct 3681 AGATCGACACCGTCAACATGGTCGAGATCGTGAACGGCATCGACCGCCTGGCCGAGCACC 3740 Query 18168 GCCGCAATATCGGCCTG 18184 | || ||||||||| Sbjct 3741 GTAAGAACATCGGCCTG 3757 >seq129892 Length=23088 Score = 504 bits (558), Expect = 1e-138 Identities = 1140/1691 (67%), Gaps = 47/1691 (3%) Strand=Plus/Minus Query 10116 ACTGACCTTGAGCATATCAGCCAGAGTATCGGCGATATCCTGCGCACACCGGTCGGCTCA 10175 ||||| | || |||||| ||||| | |||| ||||||| || ||| ||||| Sbjct 1726 ACTGATATCGACCATATCCGCCAGTCGGTGCGCGACATCCTGCTGACCCCGCAGGGCTCG 1667 Query 10176 CGGGTGATGCGTCGTGATTACGGCTCGTTGCTGGCGTCAATGATTGACCAGCCGCAGACC 10235 ||||||||||| ||||| ||||||||| ||||| || | || | ||||||||||||| | Sbjct 1666 CGGGTGATGCGCCGTGACTACGGCTCGCTGCTGTCGGCGCTGCTCGACCAGCCGCAGAAC 1607 Query 10236 CCGGCGCTTGAGTTGCAGATTAAGGTCGCATGTTACATGGCGGTGCTGAAATGGGAACCC 10295 | |||| ||||||||| | || || ||||||||| ||||| ||||| || Sbjct 1606 GAGACGCTGCGCCTGCAGATTATGTCGGCCTGCTACATGGCGCTGCTGCGCTGGGAGCCG 1547 Query 10296 CGCGTCACGCT-GTCATCTGTCACCA-CGGCGCGCAGTTTTGACGGGCGAATGACGGTCA 10353 ||| ||||||| | || | | | | | || | | |||||||| | ||| ||| Sbjct 1546 CGCATCACGCTCGACAGCATCCGCTATCAGCCGG--GGTTTGACGGCAGCATGGAGGTAG 1489 Query 10354 CGTTAACCGGCCAGCACAACGACACCGGCCAGCCACTTTCGTTAACCATCCCTGTGAGTT 10413 || ||| |||| | |||| | | ||| || |||| || |||| || ||||||| Sbjct 1488 CGCTAAGCGGCACCCGCAACCA----GTCCA--CATTTTCCCTATCCATTCCAGTGAGTT 1435 Query 10414 GAAACC-ATGCCGATTATCGACCTGAACCAGCTACCCGCACCGGATGTGGTCGAGGAGCT 10472 | ||| ||| | | || || | | ||| ||||||| ||| | | ||||| | ||| Sbjct 1434 AACACCTATGGCCACGATTGATTTAAGTCAGTTACCCGCGCCGAACATCGTCGAAGCGCT 1375 Query 10473 GGACTTTGAAACCATTCTCGCCGAA-CGCAAG-GCGACACTGATTTCCCTTTA------- 10523 ||| ||||| ||| | | || | | ||||| ||| | |||||| | | || Sbjct 1374 GGATTTTGAGACCCTGTT-GCAGCAGCGCAAAAGCG-CGCTGATTGCGCGCTATCTCCCC 1317 Query 10524 ----CCCGGAAGACCAGCAGGAGGCGGTCGCCCGTACCCTGACGCTGGAATCTGAGCCTC 10579 ||| | || ||||||||||| | ||||| ||| | || |||| || ||||| Sbjct 1316 CCCCCCCCGCCGATAAGCAGGAGGCGATAGCCCGCACCTTAACCCTGGCGTCGGAGCCGA 1257 Query 10580 TCGTCAAACTGCTGGAGGAAAATGCTTATCGTGAGCTTATCTGGCGTCAGCGTGTGAATG 10639 ||||||| ||||||||||| || || || || ||| | ||| ||| ||||| | || | Sbjct 1256 TCGTCAAGCTGCTGGAGGAGAACGCCTACCGCGAGGTGATCCTGCGCCAGCGCATTAACG 1197 Query 10640 AGGCTGCACGGGCGGTGATGCTGGCCTGTGCAGCCGGTAATGACCTTGATGTGATTGGTG 10699 | || || || ||| |||| | || ||| | || || || | |||| | Sbjct 1196 AAGCGGCGAAAGCCACCATGGTGGCATTCGCCAGCGGCAGCGATCTCGACCAGCTTGGGG 1137 Query 10700 CCAATTACAACACCACGCGCCTGATTATCACCCCGGCAGATGATTCGACCATCCCGCCGA 10759 ||| || | ||| || ||| | | | || |||||| | || | ||||||| Sbjct 1136 TCAACAACGGCGTCACCCGTCTGGTGCTGAAACCCGCAGATAACAGCACGCTGCCGCCGA 1077 Query 10760 CACCGGCAGTGATGGAATCTGACACCGATTATCGTCTGCGTATTCAGCAGGCGTTTGAAG 10819 | ||||| | | || ||| ||| | |||||||| || ||||| ||||| | Sbjct 1076 CCCCGGCGCGGCTTGAGAGCGACGACGACTTCCGTCTGCGCATCGCCCAGGCCTTTGAGG 1017 Query 10820 GTTTAAGCGTCGCCGGGTCGGTGGGTGCCTATCAGTATCATGGCCGCAGTGCCGACGGGC 10879 | | ||||| || ||| ||| || |||||| | ||||| | |||||| ||||| || | Sbjct 1016 GGCTGAGCGTAGCGGGGCCGGGCGGGGCCTATGAATATCACGCCCGCAGCGCCGATGGTC 957 Query 10880 GTGTCGCGGATATCTCTGTCACCAGTCCGTCTCCGGCCTGCGTCACCATCTCTGTGCTGT 10939 | || |||||| || | | || ||| |||||||||||| |||||| || | ||||||| Sbjct 956 GCGTGGCGGATGTCACCGCCATCAGCCCGTCTCCGGCCGTGGTCACCGTCACCGTGCTGT 897 Query 10940 CACGTGAGAATAACGGTGTGGCATCCGAAGACCTGCTGGCTGTGGT--ACGTAACGCCCT 10997 | ||||| ||| | ||| || || |||||||| || || ||| || || Sbjct 896 CGCGTGAAGGGCGCGGCGAGGCCAGCGCTGAACTGCTGGCCGTCGTCAACG--CGGCGCT 839 Query 10998 TAATGGCGAGGATGTCAGGCCGGTGGCCGACCGCGTGACCGTGCAGTCTGCCGCCATCGT 11057 |||| |||||| || | |||||||| || ||||| | ||||||||| || ||||| Sbjct 838 GAATGACGAGGAGGTGCGCCCGGTGGCGGATCGCGTCAGCGTGCAGTCGGCAAAAATCGT 779 Query 11058 TGAATACCAGATAAACGCCACGCTTTACCTTTACCCTGGTCCCGAAAGCGAACCCATCCG 11117 || |||| | | |||||||| | || || || || || || || || ||||| Sbjct 778 CGAGTACCGCGTTGAGGCCACGCTGTTTCTCTATCCCGGGCCGGAGGCGGAGCCGATCCG 719 Query 11118 CGCGGCCGCAGTaaaaaaaCTGGAAGCGTATATCACGGCACAGCACCGGCTGGGGCGCGA 11177 ||| ||| | | | |||| || | | | || || ||| |||||||||||||| Sbjct 718 CGCCGCCTCGGCAGCCCGGCTGGCGGCCTTTGTAACCGCCCAGTCGCGGCTGGGGCGCGA 659 Query 11178 CATCCGTCTGTCTGCCATTTATGCCGCTTTGCATGTGGAAGGCGTGCAGCGTGTCGAACT 11237 ||||| ||| || | ||||| || |||| || || || || ||||| || || || Sbjct 658 TATCCGCAGGTCAGCGCTGTATGCGGCGCTGCACGTCGAGGGTGTCCAGCGCGTAGAGCT 599 Query 11238 GACTGCACCACTG--GCTGACATCGTGCTCAACAGTACGCAGGCGTCTTTCTGTACCGAA 11295 | | ||| | ||| ||||| | ||||| | | || |||||| | | ||| |||| Sbjct 598 GGC-GCAGC-CTGCTGCTGATGTGGTGCTGGATAAAACCCAGGCGGCGTACTGCACCG-C 542 Query 11296 TAC-CGCGTCGTGACCGGAGGCTCGGATGAGTGATTCGCGACTGCTGCCGACCGGCTCAT 11354 ||| | ||| | ||||| || ||||||||| || |||||||| |||||| | Sbjct 541 TACGCAGATCGCGGTAGGAGGTTCCGATGAGTGA---CCGCCTGCTGCCCGTCGGCTCGT 485 Query 11355 CACCGCTTGAAGTTGCTGCCGCAAAAGCCTGTGCGGAAATTGAAAAAACGCCGGTCAGTA 11414 ||| ||| || || || ||||| ||||||||||| | | | |||||| Sbjct 484 CACAGCTCGAGGTGGCCGCCGCCGAAGCCTGTGCGCGCCTGCAGCAGCTGCCGGTGCCGC 425 Query 11415 TTCGTGAGCTGTGGAACCCGGATACCTGTCCGGCAAATCTGCTGCCGTGGCTGGCGTGGG 11474 | || |||||||||||| | || || ||| ||||| || | || || |||| Sbjct 424 TGCGCACCCTGTGGAACCCGCAGACTTGCCCGCTGCCGCTGCTCCCCTATCTCGCCTGGG 365 Query 11475 CGTTTTCGGTCGACAGGTGGGATGAAAAGTGGCCGGAAGCGACAAAACGCGCCGTTATCC 11534 | | ||||| || | |||||| | |||||||||||| ||| || || || || Sbjct 364 CCTGGTCGGTGGATCGCTGGGATCAGGAGTGGCCGGAAGAGACCCGGCGTGCGGTGGTCG 305 Query 11535 GCGATGCGTATTTCATTCATTGTCATAAAGGCAC--TGTCGGCGCAATCCGGCGTGTGGT 11592 || || | || || || | | || ||||| | |||||| ||||| || ||||| Sbjct 304 CCGCCTCGCAGTTTATCCACCGCCGCAAGGGCACCATCTCGGCG--ATCCGCCGGGTGGT 247 Query 11593 GGAGCCGCTCGGCTATCTCATTAACGTA--AAGGAATGGTGGGAGACAAACGACCCGCCC 11650 ||||||||| || |||||||| |||| | ||||||||| ||| |||| | | || Sbjct 246 GGAGCCGCTGGGGTATCTCAT--CCGTATTACCGAATGGTGGCAGAACAACGCCGCACCT 189 Query 11651 GGAACCTTTCGCCTTGATATCGGTGTGCTGGAAAGCGGTATCACGGAGGAGATGTATCTG 11710 ||||| || | || || ||||||| ||||||| || || || ||||||||||| Sbjct 188 GGAACTTTCAGGCTGGACGTCGGTGTACTGGAAACTGGCATTACTGAGGAGATGTACAAC 129 Query 11711 GAAATGGAACGGCTGATTGCCGATGCCAAACCCGCAAGTCGCCATCTTATCGGTCTGAAC 11770 || ||||||| |||||| ||| || ||||||| || |||||||||| ||| |||| Sbjct 128 GAGCTGGAACGATTGATTGGCGACGCGAAACCCGTCAGCCGCCATCTTACCGGCCTGACA 69 Query 11771 ATTATCCAGGA 11781 || | || ||| Sbjct 68 ATCAACCTGGA 58 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97625798485380