Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_005859.1 Length=121750 Score E Sequences producing significant alignments: (Bits) Value seq79071 136 3e-27 seq222524 84.2 2e-11 >seq79071 Length=852 Score = 136 bits (150), Expect = 3e-27 Identities = 134/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 27668 AGTAAATGTACGACTAATAACGTCGTTCTGCTGTTCACGCGTCAGTGCGTTAAAACGCAC 27727 |||||| ||||| |||| |||||| |||||| ||| ||||||||| |||||||||||| Sbjct 193 AGTAAAGGTACGGGTAATTACGTCGCGCTGCTGCTCAGGCGTCAGTGAGTTAAAACGCAC 252 Query 27728 AGCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGATGTTTCTGTGCATC 27787 || || ||||||||||||||||| | || || || |||||||||||||| |||||| Sbjct 253 GGCATAGCCTGAAACACGGATAGTCAGCTGCGGATAGTTTTCAGGATGTTTAACTGCATC 312 Query 27788 CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGTTGACCACCTTCAA 27840 ||| || |||| | || ||||| || || || || |||||||||| Sbjct 313 TTCCAGCGTTTCGCGACGCAGAACGTTGACGTTCAGATGCTGTCCACCTTCAA 365 >seq222524 Length=8439 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 27668 AGTAAATGTACGACTAATAACGTCGTTCTGCTGTTCACGCGTCAGTGCGTTAAAACGCAC 27727 |||||| ||||| |||| ||||| ||||||||| |||||| | |||||||||||| Sbjct 4037 AGTAAAGGTACGCGTAATCACGTCACGCTGCTGTTCTGGCGTCAAAGAGTTAAAACGCAC 4096 Query 27728 AGCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGATGTTTCTGTGCATC 27787 || || || ||||| || || || | || || ||||| || || || ||| || || Sbjct 4097 GGCATAACCGGAAACGCGAATGGTCAGCTGCGGATATTTCTCCGGGTGCTTCACCGCCTC 4156 Query 27788 CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGTTGACCACCTTC 27838 ||| ||||| || | || ||||| || || || ||||| || || Sbjct 4157 TTCCAGCGTTTCACGGCTCAGGACGTTGACGTTCAGATGCTGACCGCCCTC 4207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 387105533201891