Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq88878 105 3e-18 seq247266 104 1e-17 seq190223 104 1e-17 seq156148 102 4e-17 seq60424 96.9 2e-15 seq49687 96.9 2e-15 seq106163 95.1 6e-15 seq46872 95.1 6e-15 seq26364 95.1 6e-15 seq192199 91.5 8e-14 seq208229 87.8 9e-13 seq167855 87.8 9e-13 seq4635 87.8 9e-13 >seq88878 Length=31467 Score = 105 bits (116), Expect = 3e-18 Identities = 78/92 (85%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||| || || ||||||||| | | |||||||| ||||||| ||||||||||||| Sbjct 5997 AAAAAAAGATTAATATGGCCCATGCAGGTCTCGAACCTGCGACCTTGGCGTTATTAGCAC 6056 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 ||||||| |||||||||||||||||||| || Sbjct 6057 CACGCTCTAACCAACTGAGCTAATGGGCCATC 6088 >seq247266 Length=17219 Score = 104 bits (114), Expect = 1e-17 Identities = 76/89 (85%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| ||||||||||||| | | |||||||| |||||||||||||||||||| Sbjct 8569 AAGAAAAAAACAAATTGGCCCATACATGTCTCGAACCTGTGACCTTCGCGTTATTAGCAC 8510 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||| |||| |||||||||| |||| Sbjct 8509 GACGATCTAACCAGCTGAGCTAATAGGCC 8481 >seq190223 Length=22535 Score = 104 bits (114), Expect = 1e-17 Identities = 76/89 (85%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||| |||| |||||||| ||| |||||||| |||||||||||||||||||| Sbjct 4750 AAGAAAAACTCAATTTGGCCCAAACAAGTCTCGAACCTGTGACCTTCGCGTTATTAGCAC 4809 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| || ||||||||||||||| |||| Sbjct 4810 GACGCCCTAACCAACTGAGCTAATAGGCC 4838 >seq156148 Length=140420 Score = 102 bits (112), Expect = 4e-17 Identities = 75/87 (86%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 11444 AAAAAATCAA-ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| | | ||||||||| | | |||||||| ||||||||||||||||||||||| Sbjct 92554 AAAAAATTAGTAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGA 92495 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||| |||||||||| |||| Sbjct 92494 CGCTCTAACCAGCTGAGCTAATAGGCC 92468 Score = 96.9 bits (106), Expect = 2e-15 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 11444 AAAAAATCAA-ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| | | ||||||||| | | |||||||| |||||||||||||||||||||| Sbjct 75211 AAAAAATTAGTAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGC 75152 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||| |||||||||| |||| Sbjct 75151 CGCTCTAACCAGCTGAGCTAATAGGCC 75125 >seq60424 Length=77390 Score = 96.9 bits (106), Expect = 2e-15 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 || |||| ||| |||||||| | | |||||||| |||||||||||||||||||||| Sbjct 19414 TAGAAAAAGAAAATGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGA 19355 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 ||| || ||||||||||||||| |||| Sbjct 19354 CGCCCTAACCAACTGAGCTAATAGGCC 19328 >seq49687 Length=108894 Score = 96.9 bits (106), Expect = 2e-15 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| |||||||||||||||||||||| |||||| |||| Sbjct 61949 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGCCGCTCTAACCAG 61890 Query 11515 CTGAGCTAATGGGCC 11529 |||||||||| |||| Sbjct 61889 CTGAGCTAATAGGCC 61875 >seq106163 Length=26370 Score = 95.1 bits (104), Expect = 6e-15 Identities = 73/86 (85%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| | | ||||||||| | | |||||||| ||||||||||||||||||||||| Sbjct 7084 AAAAAAACGA-TTGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGAC 7142 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||| |||||||||| |||| Sbjct 7143 GCTCTAACCAGCTGAGCTAATAGGCC 7168 >seq46872 Length=149310 Score = 95.1 bits (104), Expect = 6e-15 Identities = 71/83 (86%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || | ||||||||| | | ||||| || |||||||||||||||||||| Sbjct 134587 AATAAAAATTCCA--TGGCCCATGCAGGCCTCGAAGCTGCGACCTTCGCGTTATTAGCAT 134644 Query 11501 GACGCTCTRACCAACTGAGCTAA 11523 |||||||| |||||||||||||| Sbjct 134645 GACGCTCTAACCAACTGAGCTAA 134667 >seq26364 Length=9848 Score = 95.1 bits (104), Expect = 6e-15 Identities = 75/90 (83%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 11445 AAAAATCAAATT--GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||| | ||| ||||||| | | |||||||| |||||||||||||||||||||| Sbjct 7057 AAAAATGATATTTTGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGA 6998 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 ||| || ||||||||||||||| |||| || Sbjct 6997 CGCACTAACCAACTGAGCTAATAGGCCTTC 6968 >seq192199 Length=89806 Score = 91.5 bits (100), Expect = 8e-14 Identities = 72/86 (84%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| | | |||||||| | | |||||||| ||||||||||||||||||||||| Sbjct 76099 AAAAAAACTA--TGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGAC 76156 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||| |||||||||| |||| Sbjct 76157 GCTCTAACCAGCTGAGCTAATAGGCC 76182 >seq208229 Length=81347 Score = 87.8 bits (96), Expect = 9e-13 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||| | | |||||||| |||||||||||||||||| | ||||||| |||||| Sbjct 8106 TGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCCC-ACGCTCTAACCAAC 8048 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 8047 TGAGCTAATGGGCC 8034 >seq167855 Length=224350 Score = 87.8 bits (96), Expect = 9e-13 Identities = 73/89 (82%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||| || || |||||||| | | |||||||| |||||||||||||||||||| Sbjct 193299 AAAAAAAGATTAA--TGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCAC 193242 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||| |||||||||| |||| Sbjct 193241 TACGCTCTAACCAGCTGAGCTAATAGGCC 193213 Score = 84.2 bits (92), Expect = 1e-11 Identities = 74/91 (81%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||||||| | ||| |||||||| | | |||||||| |||||||||||||||||| Sbjct 201466 AATAAAAGAAAAAAGAATGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGC 201407 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||| |||| |||||||||| |||| Sbjct 201406 ACGA-GCTCTAACCAGCTGAGCTAATAGGCC 201377 >seq4635 Length=62942 Score = 87.8 bits (96), Expect = 9e-13 Identities = 73/89 (82%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||| |||||| || ||||||||| | | ||||| || ||||||| || ||||||| || Sbjct 9301 AATCAAAAATTAA--TGGCCCATGCAGGTCTCGAATCTGCGACCTTGGCCTTATTAGGAC 9244 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| ||||||||||||||| |||| Sbjct 9243 CACGCTCTAACCAACTGAGCTAATAGGCC 9215 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 259900220613796