Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_007023.1 Length=180500 Score E Sequences producing significant alignments: (Bits) Value seq260686 217 2e-51 seq1462 201 1e-46 seq79071 174 2e-38 seq494847 116 4e-21 seq498467 107 2e-18 seq15764 96.9 4e-15 seq93888 91.5 2e-13 >seq260686 Length=13603 Score = 217 bits (240), Expect = 2e-51 Identities = 426/624 (68%), Gaps = 18/624 (3%) Strand=Plus/Plus Query 41787 TAAGCTGTCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTC 41846 |||| | ||| | || ||||| |||||| | || ||||| || || ||||| ||||| Sbjct 5174 TAAGATTTCGCTGCCGACGCCAATTATGTCCGGCGTGCGCACCCCGACGCGCCAGTTCAG 5233 Query 41847 CAGTTGCGTAGTGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTAACCTCT-- 41904 | |||||| ||||||| | || || || | ||| | || || ||||| Sbjct 5234 CTCCTGCGTACTGATTGAGTGCGGCGACAGCCTTGATTCCATTAACGCC---ACCTCCAG 5290 Query 41905 -GCGATCGTGAAGTATATTTCACAACGCGCGGGTATCGGTGTTAATGCTGGACACATTCG 41963 ||||| |||||||| |||| || || || |||||||| |||| || || | ||| || Sbjct 5291 CGCGATTGTGAAGTACGTTTCTCAGCGTGCCGGTATCGGCATTAACGCCGGTCGCATCCG 5350 Query 41964 CGCAATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTG 42023 || |||| ||||| || ||||||||| | || || ||| || ||||||| Sbjct 5351 TGCGCTGGGCAGCCCGATCCGCGGCGGTGAAGCATTCCACACCGGCTGCATTCCGTTCTA 5410 Query 42024 GAAACATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGC 42083 || || | ||||| ||||| || ||||| || || || ||||| || || ||||| || Sbjct 5411 TAAGCACTTCCAGACCGCGGTGAAGTCCTGCTCTCAGGGCGGCGTGCGCGGCGGTGCAGC 5470 Query 42084 AACGTTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAA 42143 || ||| || || || |||||| ||||||| |||| ||||||||| ||||| ||||| Sbjct 5471 GACCCTGTTCTACCCAATGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAGAACAA 5530 Query 42144 CAAAGGTGTTGAGAATAACCGTATTCGTCACCTGGATTATGGCGTTCAGCTTAACGATTT 42203 | || ||||| ||||| | ||||| |||| || ||||| ||||| ||| | | Sbjct 5531 CCGCGGCGTTGAAGGCAACCGCGTGCGTCATATGGACTACGGCGTGCAGCTGAACAAGCT 5590 Query 42204 GATGTATAAGCGTTTAATCAATAACGATTACATCACACTGTTCAGCC---CTGACGTTGC 42260 ||||||| |||| | | || || | || || |||||||||| | |||| ||| Sbjct 5591 GATGTATCAGCGCCTGCTGAAGGGTGAAGAGATTACTCTGTTCAGCCCGTCCGACG-TGC 5649 Query 42261 AAATGATCGCCTGTATGATGCTTTCTATCAAGCTGATCAGACTGAGTTCGAAGAACTCTA 42320 | || ||||||| || |||| || || |||||| |||||| || || || Sbjct 5650 -----CTGGCTTGTATGACGCGTTCT-TC--GCCGATCAGGATGAGTTTGAGCGCCTGTA 5701 Query 42321 TACCAGTTTGGAAAAAGACCCAACGGTACGCAAGAAACGCATTAAAGCAGCAGACTTATT 42380 |||| | || |||||| | | |||||| | ||| | || || | ||| | || Sbjct 5702 CACCAAATACGAGAAAGACGACAGCATCCGCAAGCAGCGCGTGAAGGCGGTAGATCTGTT 5761 Query 42381 CCAGTTGCTTGTTCAGGAACGCGC 42404 | | || | | ||||||||||| Sbjct 5762 CTCGCTGATGATGCAGGAACGCGC 5785 Score = 105 bits (116), Expect = 8e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 43594 GAAAAACAACTGTCATTCTTCTGGCGACCGGAAGAAGTGGATCTGTCGATCGACCGTATG 43653 ||||| || || || ||||||||||| |||||||||||||| | ||| ||| ||||| Sbjct 7066 GAAAAGCAGCTCTCTTTCTTCTGGCGCCCGGAAGAAGTGGACGTCTCGCGCGATCGTATT 7125 Query 43654 CAGTATGCAAAAATGCCGGAACACGAGAAAATCATTTTTGATTCTAACCTGCAATATCAA 43713 | ||| |||| || ||||| ||| ||| ||| |||||| | ||||| Sbjct 7126 GACTATCAGGCGCTGCCAGAGCACGAAAAACACATCTTTATCAGCAACCTGAAGTATCAG 7185 Query 43714 ACCCTGTTAGATACCATTCAGGGACGTGGCCCTAACCTGGCGTTTCTCCCGATTGCCTCT 43773 || ||| | || | ||||||||||| |||| ||| ||||||| || ||| | ||| Sbjct 7186 ACTCTGCTGGACTCTATTCAGGGACGCAGCCCGAACGTGGCGTTGCTGCCGCTGATCTC- 7244 Query 43774 GATGTTTCAA-TGGAAACGTGGATCGAAACATGGGCTTTC 43812 ||| || ||||||| ||||| ||||| ||||| ||| Sbjct 7245 GATCCCGGAACTGGAAACCTGGATTGAAACCTGGGCGTTC 7284 >seq1462 Length=4781 Score = 201 bits (222), Expect = 1e-46 Identities = 301/426 (71%), Gaps = 6/426 (1%) Strand=Plus/Plus Query 41794 TCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGC 41853 || ||||||||||| || |||||||| || || || || || || || || | ||| Sbjct 1033 TCCTTACCTACGCCAATCATGGCTGGGGTACGGACGCCGACTCGCCAATTCAGCTCATGC 1092 Query 41854 GTAGTGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTAACCTCT---GCGATC 41910 || | || || | || ||| | | ||| | || || || ||| || ||| Sbjct 1093 GTGCTTATCGAGTGTGGCGATAGCTTAGACTCTATCAACGCC---ACTTCTAGTGCTATC 1149 Query 41911 GTGAAGTATATTTCACAACGCGCGGGTATCGGTGTTAATGCTGGACACATTCGCGCAATG 41970 || || || ||||||||||||| || |||||| | |||||||| | ||||| || | Sbjct 1150 GTTAAATACGTTTCACAACGCGCAGGGATCGGTATCAATGCTGGCCGTATTCGTGCGCTA 1209 Query 41971 GGTTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTGGAAACAT 42030 || |||||||||||||||||| | ||||| || |||||||||| ||||| Sbjct 1210 GGCAGCCCAATCCGTGGTGGTGAAGCTTTCCATACCGGTTGTATCCCGTTCTACAAACAC 1269 Query 42031 ATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAACGTTG 42090 | ||||| || || ||||| || || ||||| ||||| || || ||||| || || || Sbjct 1270 TTCCAGACGGCCGTGAAATCTTGCTCGCAAGGCGGCGTACGCGGGGGTGCCGCGACACTG 1329 Query 42091 TATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGT 42150 | ||| || || ||||| |||||| |||||| | | | || |||||||| ||| ||| Sbjct 1330 TTTTACCCTATGTGGCACTTGGAAATTGAAAGCTTATTAGTCCTGAAAAATAACCGTGGT 1389 Query 42151 GTTGAGAATAACCGTATTCGTCACCTGGATTATGGCGTTCAGCTTAACGATTTGATGTAT 42210 ||||| ||||||| | |||||||| ||||| ||||| || | ||| | | |||||| Sbjct 1390 GTTGAAGGTAACCGTGTCCGTCACCTAGATTACGGCGTACAAATCAACAAACTCATGTAT 1449 Query 42211 AAGCGT 42216 | ||| Sbjct 1450 CAACGT 1455 Score = 116 bits (128), Expect = 4e-21 Identities = 295/441 (67%), Gaps = 17/441 (4%) Strand=Plus/Plus Query 42958 GATTGGGAATGGTTGCGCGGCGAAATCAAAAAATATGGCTTGCGTAACTCAACTCTTTCC 43017 ||||||||| | || || | |||||||| | | ||||||| ||||||||||| ||||| Sbjct 2209 GATTGGGAAAGCTTACGTGAAGAAATCAAGACACATGGCTTACGTAACTCAACGCTTTCA 2268 Query 43018 GCTTTAATGCCATGTGAGAGTAGTTCTCAAGTAAGCAACTCAACAAACGGGATTGAACCG 43077 || || ||||||| || | ||| || | || | |||||||| || || || Sbjct 2269 GCATTGATGCCATCAGAAACCTCTTCGCAGATTTCTAATGCTACAAACGGTATCGAGCCT 2328 Query 43078 CCTCGCGGTCCTGTGAGTGTGAAATCTTCGAAAGAAGGTTCATTCAAC--CAGGTAGTAC 43135 || ||||| ||| ||| | ||| | |||||||| ||| ||| || ||||| || | Sbjct 2329 CCACGCGGCTATGTCAGTATCAAAGCCTCGAAAGACGGT--ATTTTACGTCAGGTCGTTC 2386 Query 43136 C-GAACCAGAACGATCAGATTGATTTCTATGATTATCTCTGGACAATGGCAAAACGCGGT 43194 | || || || | | | ||| ||||| || ||| |||| | | Sbjct 2387 CAGAGTATGAGCGCTTACA-AGATCAGTATGAGCTGCTATGGGAAATG------CCTTCT 2439 Query 43195 AATAAAGGTTATCTGTCTCATGTTGCTGTTATGCAGAAGTTTGTTGATCAAGCGATCTCT 43254 || | ||||| | | ||| | |||||||||||||||| || ||||| |||||| Sbjct 2440 AACGATGGTTACTTACAACTTGTCGGGATTATGCAGAAGTTTGTCGACCAAGCTATCTCT 2499 Query 43255 GCAAACACCAACTATGATCCGGCTAACTTCCCAGATGGTAAAGTGAAATCTGAAACCATC 43314 ||||||||||||| |||||| | | | | | || ||||| | || | | | Sbjct 2500 TCAAACACCAACTACGATCCGACACGTTACACTGGCGGGAAAGT-ACCGATGCAGCAGTT 2558 Query 43315 ATTG-ATGACCTGCTTTATGCGAACTACTACGGCGTGAAAACTCTGTATTATCACAACAC 43373 | || | |||||||| ||| | | | |||||||||||| || || ||||| ||||| Sbjct 2559 ACTGAAAGACCTGCTGACCGCGTATAAATTCGGCGTGAAAACGCTTTACTATCAAAACAC 2618 Query 43374 CCGCGACGGTGCAGGTGAAGA 43394 || || ||||| |||||| Sbjct 2619 GCGTGATGGTGC---TGAAGA 2636 Score = 95.1 bits (104), Expect = 1e-14 Identities = 254/386 (66%), Gaps = 12/386 (3%) Strand=Plus/Plus Query 43514 AACAGCCAATGTTCTTCGGTGAAGATACTGG----GGTTGCCCGATATGAAGAACAAAAA 43569 || ||||||||||||| || | || || ||||| || ||||| |||||||| Sbjct 2829 AAGAGCCAATGTTCTTTGGCCA----ACCGGTCAACGTTGCGCGCTATGACCAACAAAAA 2884 Query 43570 CATCGCGTATTCGAAACTTTGACTGAAAAACAACTGTCATTCTTCTGGCGACCGGAAGAA 43629 || | || |||| ||| |||||| ||||| || ||||| ||||| || |||||| Sbjct 2885 TATGAAATTTTTGAAAAACTGATTGAAAAGCAACTCTCCTTCTTTTGGCGCCCTGAAGAA 2944 Query 43630 GTGGATCTGTCGATCGACCGTATGCAGTATGCAAAAATGCCGGAACACGAGAAAATCATT 43689 || ||| | || ||| || || | | | |||| | || |||||| ||| |||| Sbjct 2945 GTCGATGTCTCACGCGATCGGATCGATTTTCAAAAACTTCCTGAACAC--GAACGTCATA 3002 Query 43690 TTTGATT--CTAACCTGCAATATCAAACCCTGTTAGATACCATTCAGGGACGTGGCCCTA 43747 | | || |||| | |||||||||| || || ||| | || || || || | || | Sbjct 3003 TCTTTTTAAGTAACTTAAAATATCAAACGCTATTGGATTCTATCCAAGGGCGCAGTCCGA 3062 Query 43748 ACCTGGCGTTTCTCCCGATTGCCTCTGATGTTTCAATGGAAACGTGGATCGAAACATGGG 43807 || | ||| | | ||| | ||| | | | ||||||| ||| | ||||| |||| Sbjct 3063 ACGTTGCGCTGTTACCGCTAATCTCCATTCCTGAACTGGAAACATGGGTTGAAACCTGGG 3122 Query 43808 CTTTCAGTGAAACAATTCATAGCCGCAGTTATACACACATTCAGCGTAACTTGCATATCG 43867 | ||| ||||| || || || ||| || || ||| ||||| | | || Sbjct 3123 CGTTCTCCGAAACGATCCACTCACGTTCTTACACTCATATTATTCGTAATATCGTGAACG 3182 Query 43868 ACCCGGCTAAAGAGTTCGACAAAATC 43893 |||||||| || |||||| | ||| Sbjct 3183 ACCCGGCTCTAGTATTCGACGATATC 3208 >seq79071 Length=852 Score = 174 bits (192), Expect = 2e-38 Identities = 146/179 (82%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 51920 GTTGAAGGTGGACAGCACCTAAACGTGAATGTGCTACGTCGCGAAACCCTGGAAGATGCT 51979 ||||||||||||||||| || ||||| || || || ||||||||||| ||||||||||| Sbjct 366 GTTGAAGGTGGACAGCATCTGAACGTCAACGTTCTGCGTCGCGAAACGCTGGAAGATGCA 307 Query 51980 GTGAAACATCCTGAGAAGTACCCACAGTTAACGATCCGCGTTTCAGGTTATGCAGTTCGC 52039 || ||||||||||| || || || ||| | || ||||| |||||||| ||||| || || Sbjct 306 GTTAAACATCCTGAAAACTATCCGCAGCTGACTATCCGTGTTTCAGGCTATGCCGTGCGT 247 Query 52040 TTTAATGCACTGACTCCAGAACAACAGCGCGACGTTATCGCCAGAACCTTTACGGAAAG 52098 ||||| ||||||| || || || ||||||||||| || || | |||||||| ||||| Sbjct 246 TTTAACTCACTGACGCCTGAGCAGCAGCGCGACGTAATTACCCGTACCTTTACTGAAAG 188 >seq494847 Length=1062 Score = 116 bits (128), Expect = 4e-21 Identities = 190/274 (69%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 40686 CTGAAAACCACACCAGACGATCGCGGGATCATCGTTTCCGCATGGAACCCTGTTGATCTG 40745 ||||||| | || ||| ||| | ||||||||||| ||||||||| | || ||| Sbjct 409 CTGAAAAGCGACCCGGACTCGCGCCGCATCATCGTTTCTGCATGGAACGTCGGCGAACTG 350 Query 40746 GATAAAATGGCATTGCGTCCGTGTCACTGTTTCTTCCAGTTCGTCGTAATCAACGGTAAA 40805 ||| | ||||| || ||||| ||| |||||||||||| ||| |||| || Sbjct 349 GATGAGATGGCGCTGGCCCCGTGCCACGCGTTCTTCCAGTTCTACGTTGCGGACGGCAAG 290 Query 40806 CTGTCTCTACAGTGGTATCAGCGTTCGGTTGATGTCTTCTTAGGGTTGCCGTTCAATATC 40865 || || || ||||||||| || ||| ||||| | || |||||||||||||| Sbjct 289 CTCTCCTGCCAACTGTATCAGCGCTCCTGCGATATCTTCCTCGGCCTGCCGTTCAATATC 230 Query 40866 GCCTCCTACGCTCTCCTGACGCATATTATCGCTGATATTTGCGGGTACGAAGTAGGTGAT 40925 ||| ||||||| | ||| |||||| || || | |||| ||||| |||||| Sbjct 229 GCCAGCTACGCTTTGCTGGTGCATATGATGGCCCAGCAGTGCGACCTGGAAGTGGGTGAT 170 Query 40926 CTGGTTTGGACAGGTGGTGATGTCCATATCTACA 40959 | || ||||| ||||| ||| |||| | |||| Sbjct 169 TTTGTCTGGACCGGTGGCGATACCCATCTGTACA 136 >seq498467 Length=2746 Score = 107 bits (118), Expect = 2e-18 Identities = 231/342 (68%), Gaps = 5/342 (1%) Strand=Plus/Minus Query 155751 GCAAGGGTATTCCCGACACAGCGCAATTTGCTGGCGGGTATTGTAGCGAAGCATTTCGCC 155810 |||||| || ||| || |||||| || ||||||| || || || || || || | |||| Sbjct 2034 GCAAGGTGATCCCC-ACTCAGCGCGATCTGCTGGCCGGGATCGTCGCCAAACACTACGCC 1976 Query 155811 CGTAATCATATCCTTCCGAAACATATCGTAGAAGCGCATGACTCCGGCGACATCCACTAT 155870 ||| | ||||| || ||| || | || || ||||| |||||| ||||||||| Sbjct 1975 CGTCAGCATATGCTGCCGCGTGATGTGGTCAGCGCCCATGAGCGCGGCGAGATCCACTAT 1916 Query 155871 CATGATCTGGATTACAGCCCGTTCACGCCATACACAAACTGCTGTCTGGTGGATTTGAAA 155930 || ||||| || ||| ||||| || |||||| ||| | || || Sbjct 1915 CACGATCTCGACTACTCGCCGTTTTTCCCGATGTTTAACTGCATGCTGATCGACCTGCGG 1856 Query 155931 GGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAGACATCGAACCCCCGAAATCAATC 155990 || |||||| | | |||||||| ||||||||||| || |||||||| || || || ||| Sbjct 1855 GGCATGCTGACGCACGGCTTCAAAATGGGTAACGCCGAGATCGAACCGCCTAAGTCGATC 1796 Query 155991 GGTGTTGCGACTGCTCTTATGGCACAGATCACCGCACAGATTGCTTCTCACCAGTACGGC 156050 || || || | | || ||||||| ||| ||| | || || ||||| Sbjct 1795 TCCACCGCCACCGCCGTCACCGCGCAGATCATCGCCCAGGTCGCCAGCCATATTTACGGG 1736 Query 156051 GGGACAACCTTTGCAAACG--TGGATAAAGTGCTGGCTCCGT 156090 || || ||| || || || | ||| |||||||||| |||| Sbjct 1735 GGCACCACCATT--AACCGTATTGATGAAGTGCTGGCGCCGT 1696 >seq15764 Length=1899 Score = 96.9 bits (106), Expect = 4e-15 Identities = 194/285 (68%), Gaps = 2/285 (1%) Strand=Plus/Plus Query 43564 CAAAAACATCGCGTATTCGAAACTTTGACTGAAAAACAACTGTCATTCTTCTGGCGACCG 43623 |||||| || | | || |||| ||| ||||| || || || ||||||||||| ||| Sbjct 640 CAAAAATATGACATCTTTGAAAAGCTGATCGAAAAGCAGCTCTCCTTCTTCTGGCGTCCG 699 Query 43624 GAAGAAGTGGATCTGTCGATCGACCGTATGCAGTATGCAAAAATGCCGGAACACGAGAAA 43683 ||||| || || | || ||| || || | || ||||||| ||||| ||| Sbjct 700 GAAGAGGTCGACGTTTCACGCGATCGCATCGATTACCAGGCGCTGCCGGACCACGAAAAA 759 Query 43684 ATCATTTTTGATTCTAACCTGCAATATCAAACCCTGTTAGATACCATTCAGGGACGTGGC 43743 |||||| |||||| ||||||| || ||| | ||| | |||||||| || || Sbjct 760 CATATTTTTATCAGCAACCTGAAATATCAGACGCTGCTGGATTCTATTCAGGGCCGCAGC 819 Query 43744 CCTAACCTGGCGTTTCTCCCGATTGCCTCTGATGTTTCAA-TGGAAACGTGGATCGAAAC 43802 || ||| | ||| | || ||| | ||| ||| | || ||||||| ||||| ||||| Sbjct 820 CCGAACGTCGCGCTGCTGCCGCTGATCTC-GATTCCTGAACTGGAAACCTGGATTGAAAC 878 Query 43803 ATGGGCTTTCAGTGAAACAATTCATAGCCGCAGTTATACACACAT 43847 ||||| ||| || || ||||| ||| ||| || ||||| Sbjct 879 CTGGGCGTTCTCAGAGACGATTCACTCCCGTTCTTACACCCACAT 923 >seq93888 Length=1140 Score = 91.5 bits (100), Expect = 2e-13 Identities = 164/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 40707 CGCGGGATCATCGTTTCCGCATGGAACCCTGTTGATCTGGATAAAATGGCATTGCGTCCG 40766 ||| | |||||||| || |||||||| || || | ||||||||||| || || Sbjct 15 CGCCGCATCATCGTATCGGCATGGAATGTTGGAGAGTTAGATAAAATGGCGCTGGCACCT 74 Query 40767 TGTCACTGTTTCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAG 40826 || || || ||||| ||| ||| | || || ||||| | ||| |||||| Sbjct 75 TGCCATGCCTTTTTCCAATTCTACGTCGTGAATGGCAAACTCAGTTGCCAGCTCTATCAG 134 Query 40827 CGTTCGGTTGATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCTCTCCTGACG 40886 || || ||||||||| ||||| || || || ||||||||| ||| || || ||| Sbjct 135 CGCTCTTGTGATGTCTTTTTAGGCTTACCCTTTAATATCGCCAGCTATGCGCTACTGGTC 194 Query 40887 CATATTATCGCTGATATTTGCGGGTACGAAGTAGGTGATCTGGTTTGGACAGGTGGTGAT 40946 ||||| ||||| | || | |||||| || ||| | ||||||||||| || ||| Sbjct 195 CATATGGTCGCTCAGCAGTGTGATCTCGAAGTCGGCGATTTTGTTTGGACAGGGGGCGAT 254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573868423133600