Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq189152 95.1 1e-14 seq141175 82.4 7e-11 >seq189152 Length=79535 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 ||||| || |||||||| ||||| | || || | || || ||| | |||||||||| Sbjct 37080 TTTGTCAAGACATTAACAGGAAAGACCATCACTCTTGAGGTGGAGAGCTCCGACACCATC 37021 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | || || ||||| ||||| || ||||| ||||| ||||| ||||| || Sbjct 37020 GATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAGCAGAGGCTT 36961 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || |||||||| || |||| | | | | ||||||||||| |||||| Sbjct 36960 ATCTTTGCAGGGAAGCAACTGGAGGATGGGCGTACCTTGGCAGATTATAACATCCAAAAA 36901 Query 24180 GAATCTACAATTCAT 24194 ||||| || ||||| Sbjct 36900 GAATCCACTCTTCAT 36886 >seq141175 Length=38247 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || || | || ||| |||| |||||| || | Sbjct 25471 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCC 25530 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| || ||||| ||||| || || Sbjct 25531 GACACCATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 25590 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || |||||||| ||||| |||| | | | | | || || ||| Sbjct 25591 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGGCAGACTACAAC 25650 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || || || || || || |||| Sbjct 25651 ATCCAGAAGGAGTCCACCCTTCA 25673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427320159339255